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PMID: 15070731 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Mammalian GLD-2 homologs are poly(A) polymerases.

Kwak JE, Wang L, Ballantyne S, Kimble J, Wickens M

Abstract

GLD-2 is a cytoplasmic poly(A) polymerase present in the Caenorhabditis elegans germ line and embryo. It is a divergent member of the DNA polymerase beta nucleotidyl transferase superfamily, which includes CCA-adding enzymes, DNA polymerases and eukaryotic nuclear poly(A) polymerases. The polyadenylation activity of GLD-2 is stimulated by physical interaction with an RNA binding protein, GLD-3. To test whether GLD-3 might stimulate GLD-2 by recruiting it to RNA, we tethered C. elegans GLD-2 to mRNAs in Xenopus oocytes by using MS2 coat protein. Tethered GLD-2 adds poly(A) and stimulates translation of the mRNA, demonstrating that recruitment is sufficient to stimulate polyadenylation activity. We use the same tethered assay to identify human and mouse poly(A) polymerases related to GLD-2. This may provide entrees to previously uncharacterized modes of polyadenylation in mammalian cells.

MeSH Terms
Animals Humans Kinetics Mice Models, Molecular Nucleotidyltransferases/genetics,metabolism Phylogeny Plasmids Poly A/metabolism Polynucleotide Adenylyltransferase/chemistry,genetics,metabolism Protein Biosynthesis Protein Conformation RNA, Messenger/genetics Recombinant Fusion Proteins/chemistry,metabolism Transcription, Genetic
Chemicals
RNA, Messenger Recombinant Fusion Proteins Poly A Nucleotidyltransferases Polynucleotide Adenylyltransferase
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Kwak Jae Eun
Department of Biochemistry, 433 Babcock Drive, University of Wisconsin, Madison, WI 53706-1544, USA.
Wang Liaoteng
Ballantyne Scott
Kimble Judith
Wickens Marvin
References (47)
47 references, click to expand
  1. Crystal structure of mammalian poly(A) polymerase in complex with an analog of ATP.
    EMBO J. 2000 Aug 15;19(16):4193-203 PMID: 10944102
  2. RNA polymerase II and the integration of nuclear events.
    Genes Dev. 2000 Jun 15;14(12):1415-29 PMID: 10859161
  3. Multiple portions of poly(A)-binding protein stimulate translation in vivo.
    EMBO J. 2000 Sep 1;19(17):4723-33 PMID: 10970864
  4. The ends of the affair: capping and polyadenylation.
    Nat Struct Biol. 2000 Oct;7(10):838-42 PMID: 11017188
  5. Local protein synthesis and its role in synapse-specific plasticity.
    Curr Opin Neurobiol. 2000 Oct;10(5):587-92 PMID: 11084321
  6. Identification of a novel isoform of poly(A) polymerase, TPAP, specifically present in the cytoplasm of spermatogenic cells.
    Dev Biol. 2000 Dec 1;228(1):106-15 PMID: 11087630
  7. Intracellular signaling from the endoplasmic reticulum to the nucleus: the unfolded protein response in yeast and mammals.
    Curr Opin Cell Biol. 2001 Jun;13(3):349-55 PMID: 11343907
  8. Identification and functional characterization of neo-poly(A) polymerase, an RNA processing enzyme overexpressed in human tumors.
    Mol Cell Biol. 2001 Aug;21(16):5614-23 PMID: 11463842
  9. A novel nuclear human poly(A) polymerase (PAP), PAP gamma.
    J Biol Chem. 2001 Sep 7;276(36):33504-11 PMID: 11431479
  10. Poly(A) polymerase and the regulation of cytoplasmic polyadenylation.
    J Biol Chem. 2001 Nov 9;276(45):41810-6 PMID: 11551905
  11. Localization and translation of mRNA in dendrites and axons.
    Nat Rev Neurosci. 2001 Dec;2(12):889-98 PMID: 11733796
  12. Phosphorylation of CPEB by Eg2 mediates the recruitment of CPSF into an active cytoplasmic polyadenylation complex.
    Mol Cell. 2000 Nov;6(5):1253-9 PMID: 11106762
  13. Integrating mRNA processing with transcription.
    Cell. 2002 Feb 22;108(4):501-12 PMID: 11909521
  14. Gene-specific regulation by general translation factors.
    Cell. 2002 Feb 22;108(4):545-56 PMID: 11909525
  15. T7 RNA polymerase-directed transcripts are processed in yeast and link 3' end formation to mRNA nuclear export.
    RNA. 2002 May;8(5):686-97 PMID: 12022234
  16. Tethered function assays using 3' untranslated regions.
    Methods. 2002 Feb;26(2):142-50 PMID: 12054890
  17. Cid13 is a cytoplasmic poly(A) polymerase that regulates ribonucleotide reductase mRNA.
    Cell. 2002 May 31;109(5):563-73 PMID: 12062100
  18. Hijacking the translation apparatus by RNA viruses.
    J Cell Biol. 2002 Aug 5;158(3):395-9 PMID: 12163463
  19. Cytoplasmic poly(A) polymerases mediate cellular responses to S phase arrest.
    Proc Natl Acad Sci U S A. 2002 Sep 17;99(19):12079-84 PMID: 12218190
  20. Gene regulation: reviving the message.
    Nature. 2002 Sep 19;419(6904):267-8 PMID: 12239557
  21. A regulatory cytoplasmic poly(A) polymerase in Caenorhabditis elegans.
    Nature. 2002 Sep 19;419(6904):312-6 PMID: 12239571
  22. GLD-3, a bicaudal-C homolog that inhibits FBF to control germline sex determination in C. elegans.
    Dev Cell. 2002 Nov;3(5):697-710 PMID: 12431376
  23. Regulation of spermatogenesis by testis-specific, cytoplasmic poly(A) polymerase TPAP.
    Science. 2002 Dec 6;298(5600):1999-2002 PMID: 12471261
  24. Complex alternative RNA processing generates an unexpected diversity of poly(A) polymerase isoforms.
    Mol Cell Biol. 1996 May;16(5):2378-86 PMID: 8628305
  25. Mutational analysis of mammalian poly(A) polymerase identifies a region for primer binding and catalytic domain, homologous to the family X polymerases, and to other nucleotidyltransferases.
    EMBO J. 1996 May 15;15(10):2593-603 PMID: 8665867
  26. Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells.
    Annu Rev Biochem. 1996;65:693-739 PMID: 8811193
  27. Cell-cycle related regulation of poly(A) polymerase by phosphorylation.
    Nature. 1996 Nov 21;384(6606):282-5 PMID: 8918882
  28. The C-terminal domain of RNA polymerase II couples mRNA processing to transcription.
    Nature. 1997 Jan 23;385(6614):357-61 PMID: 9002523
  29. Starting at the beginning, middle, and end: translation initiation in eukaryotes.
    Cell. 1997 Jun 13;89(6):831-8 PMID: 9200601
  30. Mechanism and regulation of mRNA polyadenylation.
    Genes Dev. 1997 Nov 1;11(21):2755-66 PMID: 9353246
  31. Genetic regulation of entry into meiosis in Caenorhabditis elegans.
    Development. 1998 May;125(10):1803-13 PMID: 9550713
  32. Processivity of the Saccharomyces cerevisiae poly(A) polymerase requires interactions at the carboxyl-terminal RNA binding domain.
    Mol Cell Biol. 1998 Oct;18(10):5942-51 PMID: 9742111
  33. DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history.
    Nucleic Acids Res. 1999 Apr 1;27(7):1609-18 PMID: 10075991
  34. Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis.
    Microbiol Mol Biol Rev. 1999 Jun;63(2):405-45 PMID: 10357856
  35. 3'-End processing of pre-mRNA in eukaryotes.
    FEMS Microbiol Rev. 1999 Jun;23(3):277-95 PMID: 10371034
  36. mRNA polyadenylation and its coupling to other RNA processing reactions and to transcription.
    Curr Opin Cell Biol. 1999 Jun;11(3):352-7 PMID: 10395555
  37. The cleavage and polyadenylation specificity factor in Xenopus laevis oocytes is a cytoplasmic factor involved in regulated polyadenylation.
    Mol Cell Biol. 1999 Aug;19(8):5707-17 PMID: 10409759
  38. The neighbor-joining method: a new method for reconstructing phylogenetic trees.
    Mol Biol Evol. 1987 Jul;4(4):406-25 PMID: 3447015
  39. Determinants that contribute to cytoplasmic stability of human c-fos and beta-globin mRNAs are located at several sites in each mRNA.
    Mol Cell Biol. 1988 Aug;8(8):3244-50 PMID: 3211141
  40. The enzyme that adds poly(A) to mRNAs is a classical poly(A) polymerase.
    Mol Cell Biol. 1990 Feb;10(2):846-9 PMID: 2153926
  41. Primary structure and expression of bovine poly(A) polymerase.
    Nature. 1991 Sep 19;353(6341):229-34 PMID: 1896071
  42. Isolation and expression of cDNA clones encoding mammalian poly(A) polymerase.
    EMBO J. 1991 Dec;10(13):4251-7 PMID: 1756732
  43. Assembly of a processive messenger RNA polyadenylation complex.
    EMBO J. 1993 Feb;12(2):585-94 PMID: 8440247
  44. Multiple forms of poly(A) polymerases in human cells.
    Proc Natl Acad Sci U S A. 1994 Feb 1;91(3):979-83 PMID: 8302877
  45. Poly(A) polymerase contains multiple functional domains.
    Mol Cell Biol. 1994 May;14(5):2946-57 PMID: 8164653
  46. Poly (A) polymerases in the nucleus and cytoplasm of frog oocytes: dynamic changes during oocyte maturation and early development.
    RNA. 1995 Mar;1(1):64-78 PMID: 7489490
  47. Structure of yeast poly(A) polymerase alone and in complex with 3'-dATP.
    Science. 2000 Aug 25;289(5483):1346-9 PMID: 10958780
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
2004-03-30
Pages
4407-12
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC384760
Subset
IM
Grants
NIGMS NIH HHS · R01 GM031892 · United States
NIGMS NIH HHS · R37 GM031892 · United States
NIGMS NIH HHS · GM31892 · United States
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