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PMID: 10409759 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

The cleavage and polyadenylation specificity factor in Xenopus laevis oocytes is a cytoplasmic factor involved in regulated polyadenylation.

Molecular and cellular biology ·Vol. 19 ·No. 8 ·1999-08-00 ·Pages 5707-17

Dickson KS, Bilger A, Ballantyne S, Wickens MP

Abstract

During early development, specific mRNAs receive poly(A) in the cytoplasm. This cytoplasmic polyadenylation reaction correlates with, and in some cases causes, translational stimulation. Previously, it was suggested that a factor similar to the multisubunit nuclear cleavage and polyadenylation specificity factor (CPSF) played a role in cytoplasmic polyadenylation. A cDNA encoding a cytoplasmic form of the 100-kDa subunit of Xenopus laevis CPSF has now been isolated. The protein product is 91% identical at the amino acid sequence level to nuclear CPSF isolated from Bos taurus thymus. This report provides three lines of evidence that implicate the X. laevis homologue of the 100-kDa subunit of CPSF in the cytoplasmic polyadenylation reaction. First, the protein is predominantly localized to the cytoplasm of X. laevis oocytes. Second, the 100-kDa subunit of X. laevis CPSF forms a specific complex with RNAs that contain both a cytoplasmic polyadenylation element (CPE) and the polyadenylation element AAUAAA. Third, immunodepletion of the 100-kDa subunit of X. laevis CPSF reduces CPE-specific polyadenylation in vitro. Further support for a cytoplasmic form of CPSF comes from evidence that a putative homologue of the 30-kDa subunit of nuclear CPSF is also localized to the cytoplasm of X. laevis oocytes. Overexpression of influenza virus NS1 protein, which inhibits nuclear polyadenylation through an interaction with the 30-kDa subunit of nuclear CPSF, prevents cytoplasmic polyadenylation, suggesting that the cytoplasmic X. laevis form of the 30-kDa subunit of CPSF is involved in this reaction. Together, these results indicate that a distinct, cytoplasmic form of CPSF is an integral component of the cytoplasmic polyadenylation machinery.

MeSH Terms
Amino Acid Sequence Animals Cattle Cell Nucleus/metabolism Cytoplasm/metabolism Macromolecular Substances Molecular Sequence Data Oocytes/metabolism RNA Precursors/metabolism RNA Processing, Post-Transcriptional/physiology RNA, Messenger/biosynthesis RNA-Binding Proteins/genetics,isolation & purification,physiology Sequence Alignment Sequence Homology, Amino Acid Transcription Factors/physiology Viral Nonstructural Proteins/genetics,physiology Xenopus Proteins Xenopus laevis/genetics,metabolism mRNA Cleavage and Polyadenylation Factors
Chemicals
Cpeb1 protein, Xenopus INS1 protein, influenza virus Macromolecular Substances RNA Precursors RNA, Messenger RNA-Binding Proteins Transcription Factors Viral Nonstructural Proteins Xenopus Proteins mRNA Cleavage and Polyadenylation Factors
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Dickson K S
Department of Biochemistry, College of Agricultural and Life Sciences, University of Wisconsin, Madison, Wisconsin 53706, USA.
Bilger A
Ballantyne S
Wickens M P
References (51)
51 references, click to expand
  1. Maturation-specific polyadenylation and translational control: diversity of cytoplasmic polyadenylation elements, influence of poly(A) tail size, and formation of stable polyadenylation complexes.
    Mol Cell Biol. 1990 Nov;10(11):5634-45 PMID: 1700272
  2. Meiotic maturation in Xenopus requires polyadenylation of multiple mRNAs.
    EMBO J. 1998 Jun 1;17(11):3168-75 PMID: 9606198
  3. Maturation-specific polyadenylation: in vitro activation by p34cdc2 and phosphorylation of a 58-kD CPE-binding protein.
    Genes Dev. 1991 Sep;5(9):1697-708 PMID: 1653174
  4. Purification of the cleavage and polyadenylation factor involved in the 3'-processing of messenger RNA precursors.
    J Biol Chem. 1991 Oct 15;266(29):19768-76 PMID: 1918081
  5. Cleavage and polyadenylation factor CPF specifically interacts with the pre-mRNA 3' processing signal AAUAAA.
    EMBO J. 1991 Dec;10(13):4241-9 PMID: 1756731
  6. Kinesin-related proteins required for assembly of the mitotic spindle.
    J Cell Biol. 1992 Jul;118(1):95-108 PMID: 1618910
  7. Characterization of the multisubunit cleavage-polyadenylation specificity factor from calf thymus.
    J Biol Chem. 1992 Jul 25;267(21):14804-11 PMID: 1634525
  8. The biochemistry of 3'-end cleavage and polyadenylation of messenger RNA precursors.
    Annu Rev Biochem. 1992;61:419-40 PMID: 1353951
  9. Polyadenylation of maternal mRNA during oocyte maturation: poly(A) addition in vitro requires a regulated RNA binding activity and a poly(A) polymerase.
    EMBO J. 1992 Dec;11(13):5021-32 PMID: 1464324
  10. The influenza virus NS1 protein is a poly(A)-binding protein that inhibits nuclear export of mRNAs containing poly(A).
    J Virol. 1994 Apr;68(4):2425-32 PMID: 7908060
  11. Two functional domains of the influenza virus NS1 protein are required for regulation of nuclear export of mRNA.
    J Virol. 1994 Apr;68(4):2433-41 PMID: 8139028
  12. Nuclear polyadenylation factors recognize cytoplasmic polyadenylation elements.
    Genes Dev. 1994 May 1;8(9):1106-16 PMID: 7926790
  13. CPEB is a specificity factor that mediates cytoplasmic polyadenylation during Xenopus oocyte maturation.
    Cell. 1994 Nov 18;79(4):617-27 PMID: 7954828
  14. The influenza virus NS1 protein: a novel inhibitor of pre-mRNA splicing.
    Genes Dev. 1994 Aug 1;8(15):1817-28 PMID: 7958859
  15. Characterization of cleavage and polyadenylation specificity factor and cloning of its 100-kilodalton subunit.
    Mol Cell Biol. 1994 Dec;14(12):8183-90 PMID: 7969155
  16. Cloning and characterization of a Xenopus poly(A) polymerase.
    Mol Cell Biol. 1995 Mar;15(3):1422-30 PMID: 7862135
  17. Degradation of mRNA in eukaryotes.
    Cell. 1995 Apr 21;81(2):179-83 PMID: 7736570
  18. No end yet to messenger RNA 3' processing!
    Cell. 1995 Jun 16;81(6):829-32 PMID: 7781059
  19. A complex protein assembly catalyzes polyadenylation of mRNA precursors.
    Curr Opin Genet Dev. 1995 Apr;5(2):222-8 PMID: 7613093
  20. Cloning of cDNAs encoding the 160 kDa subunit of the bovine cleavage and polyadenylation specificity factor.
    Nucleic Acids Res. 1995 Jul 25;23(14):2629-35 PMID: 7651824
  21. The 160-kD subunit of human cleavage-polyadenylation specificity factor coordinates pre-mRNA 3'-end formation.
    Genes Dev. 1995 Nov 1;9(21):2672-83 PMID: 7590244
  22. Poly (A) polymerases in the nucleus and cytoplasm of frog oocytes: dynamic changes during oocyte maturation and early development.
    RNA. 1995 Mar;1(1):64-78 PMID: 7489490
  23. Newly synthesized protein(s) must associate with p34cdc2 to activate MAP kinase and MPF during progesterone-induced maturation of Xenopus oocytes.
    EMBO J. 1995 Nov 15;14(22):5597-607 PMID: 8521817
  24. XKCM1: a Xenopus kinesin-related protein that regulates microtubule dynamics during mitotic spindle assembly.
    Cell. 1996 Jan 12;84(1):37-47 PMID: 8548824
  25. Influenza virus NS1 protein interacts with the cellular 30 kDa subunit of CPSF and inhibits 3'end formation of cellular pre-mRNAs.
    Mol Cell. 1998 Jun;1(7):991-1000 PMID: 9651582
  26. Control of translation initiation in animals.
    Annu Rev Cell Dev Biol. 1998;14:399-458 PMID: 9891789
  27. Influenza A virus NS1 protein targets poly(A)-binding protein II of the cellular 3'-end processing machinery.
    EMBO J. 1999 Apr 15;18(8):2273-83 PMID: 10205180
  28. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  29. Post-transcriptional processing of simian virus 40 late transcripts in injected frog oocytes.
    J Mol Biol. 1983 Jan 5;163(1):1-26 PMID: 6682148
  30. Rapid and efficient site-specific mutagenesis without phenotypic selection.
    Proc Natl Acad Sci U S A. 1985 Jan;82(2):488-92 PMID: 3881765
  31. Separation and characterization of a poly(A) polymerase and a cleavage/specificity factor required for pre-mRNA polyadenylation.
    Cell. 1988 Mar 11;52(5):731-42 PMID: 2830992
  32. Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer.
    Proc Natl Acad Sci U S A. 1988 Dec;85(23):8998-9002 PMID: 2461560
  33. Poly(A) elongation during Xenopus oocyte maturation is required for translational recruitment and is mediated by a short sequence element.
    Genes Dev. 1989 Jun;3(6):803-15 PMID: 2568313
  34. Poly(A) addition during maturation of frog oocytes: distinct nuclear and cytoplasmic activities and regulation by the sequence UUUUUAU.
    Genes Dev. 1989 Dec;3(12B):2151-62 PMID: 2628165
  35. CPEB controls the cytoplasmic polyadenylation of cyclin, Cdk2 and c-mos mRNAs and is necessary for oocyte maturation in Xenopus.
    EMBO J. 1996 May 15;15(10):2582-92 PMID: 8665866
  36. The biochemistry of polyadenylation.
    Trends Biochem Sci. 1996 Jul;21(7):247-50 PMID: 8755245
  37. Evolutionary conservation of sequence elements controlling cytoplasmic polyadenylylation.
    Proc Natl Acad Sci U S A. 1996 Aug 20;93(17):9027-32 PMID: 8799148
  38. Purification of the Saccharomyces cerevisiae cleavage/polyadenylation factor I. Separation into two components that are required for both cleavage and polyadenylation of mRNA 3' ends.
    J Biol Chem. 1996 Oct 25;271(43):27167-75 PMID: 8900210
  39. Essential yeast protein with unexpected similarity to subunits of mammalian cleavage and polyadenylation specificity factor (CPSF).
    Science. 1996 Nov 29;274(5292):1511-4 PMID: 8929408
  40. Sequence similarity between the 73-kilodalton protein of mammalian CPSF and a subunit of yeast polyadenylation factor I.
    Science. 1996 Nov 29;274(5292):1514-7 PMID: 8929409
  41. Dependence of yeast pre-mRNA 3'-end processing on CFT1: a sequence homolog of the mammalian AAUAAA binding factor.
    Science. 1996 Nov 29;274(5292):1517-20 PMID: 8929410
  42. The polyadenylation factor CstF-64 regulates alternative processing of IgM heavy chain pre-mRNA during B cell differentiation.
    Cell. 1996 Nov 29;87(5):941-52 PMID: 8945520
  43. Cleavage factor II of Saccharomyces cerevisiae contains homologues to subunits of the mammalian Cleavage/ polyadenylation specificity factor and exhibits sequence-specific, ATP-dependent interaction with precursor RNA.
    J Biol Chem. 1997 Apr 18;272(16):10831-8 PMID: 9099738
  44. Life and death in the cytoplasm: messages from the 3' end.
    Curr Opin Genet Dev. 1997 Apr;7(2):220-32 PMID: 9115434
  45. The mechanism of 3' cleavage and polyadenylation of eukaryotic pre-mRNA.
    Prog Nucleic Acid Res Mol Biol. 1997;57:41-71 PMID: 9175430
  46. The 30-kD subunit of mammalian cleavage and polyadenylation specificity factor and its yeast homolog are RNA-binding zinc finger proteins.
    Genes Dev. 1997 Jul 1;11(13):1703-16 PMID: 9224719
  47. A dependent pathway of cytoplasmic polyadenylation reactions linked to cell cycle control by c-mos and CDK1 activation.
    Mol Biol Cell. 1997 Aug;8(8):1633-48 PMID: 9285830
  48. A multisubunit 3' end processing factor from yeast containing poly(A) polymerase and homologues of the subunits of mammalian cleavage and polyadenylation specificity factor.
    EMBO J. 1997 Aug 1;16(15):4727-37 PMID: 9303317
  49. The Mos pathway regulates cytoplasmic polyadenylation in Xenopus oocytes.
    Mol Cell Biol. 1997 Nov;17(11):6419-26 PMID: 9343404
  50. Mechanism and regulation of mRNA polyadenylation.
    Genes Dev. 1997 Nov 1;11(21):2755-66 PMID: 9353246
  51. Purification and characterization of a mammalian polyadenylate polymerase involved in the 3' end processing of messenger RNA precursors.
    J Biol Chem. 1991 Feb 15;266(5):3131-9 PMID: 1993684
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1999-08-00
Pages
5707-17
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC84422
Subset
IM
Grants
NIGMS NIH HHS · GM50942 · United States
NIGMS NIH HHS · R01 GM050942 · United States
NIGMS NIH HHS · R37 GM031892 · United States
NIGMS NIH HHS · GM31892 · United States
NIGMS NIH HHS · R01 GM031892 · United States
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GENBANK
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