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PMID: 14766817 Published · ppublish English Journal Article Multicenter Study Research Support, Non-U.S. Gov't

Multicenter evaluation of the performance characteristics of the bayer VERSANT HCV RNA 3.0 assay (bDNA).

Journal of clinical microbiology ·Vol. 42 ·No. 2 ·2004-02-00 ·Pages 563-9

Elbeik T, Surtihadi J, Destree M, Gorlin J, Holodniy M, Jortani SA, Kuramoto K, Ng V, Valdes R, Valsamakis A, Terrault NA

Abstract

In this multicenter evaluation, the VERSANT HCV RNA 3.0 Assay (bDNA) (Bayer Diagnostics, Tarrytown, N.Y.) was shown to have excellent reproducibility, linearity, and analytical sensitivity across specimen collection matrices (serum, EDTA, ACD-A), and hepatitis C virus (HCV) genotypes 1 to 6. The VERSANT HCV bDNA Assay has a reportable range of 615 to 7690000 (7.69 x 10(6)) IU/ml. The total coefficient of variation (CV) ranged from 32.4% at 615 IU/ml to 17% at 6.8 x 10(6) IU/ml. The assay was linear across the reportable range. Analytical specificity of 98.8% was determined by testing 999 specimens from volunteer blood donors. Evaluation of HCV genotypes using RNA transcripts of representative clones of 1a, 1b, 2a, 2b, 2c, 3a, 4a, 5a, and 6a and patient specimens showed that the largest difference between genotype 1, upon which the assay is standardized, and non-1 genotypes was within 1.5-fold. Testing of potentially interfering endogenous substances and exogenous substances and conditions found no interference in HCV-positive or HCV-negative specimens except for unconjugated bilirubin at concentrations of >or=20 mg/dl and protein at concentrations of >or=9 g/dl. Biological variability was estimated from 29 clinically stable individuals not on HCV therapy who were tested weekly over an 8-week period. The combined estimate of total (biologic plus assay) variability was 0.15 log(10) standard deviation (CV, 36.1%), a fold change of 2.6. Thus, the observed fold change between any two consecutive HCV RNA measures is expected to be less than 2.6-fold (equivalent to 0.41 log(10) IU/ml) 95% of the time in clinically stable individuals.

MeSH Terms
Branched DNA Signal Amplification Assay/methods Hepacivirus/classification,genetics,isolation & purification Hepatitis C/blood,diagnosis,virology Humans RNA, Viral/blood Reagent Kits, Diagnostic Reproducibility of Results Sensitivity and Specificity Specimen Handling
Chemicals
RNA, Viral Reagent Kits, Diagnostic
Authors & Affiliations
11 authors, click to expand affiliations / ORCID
Elbeik Tarek
Department of Laboratory Medicine, University of California, San Francisco 94110, USA. elbeik@itsa.ucsf.edu
Surtihadi Johan
Destree Mark
Gorlin Jed
Holodniy Mark
Jortani Saeed A
Kuramoto Ken
Ng Valerie
Valdes Roland
Valsamakis Alexandra
Terrault Norah A
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Article Info
Journal
Journal of clinical microbiology
Abbr.
J Clin Microbiol
ISSN
0095-1137
Published
2004-02-00
Pages
563-9
Language
English
Region
United States
NLM ID
7505564
PMCID
PMC344448
Subset
IM
Analysis Services
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