Abstract
We assessed the performance of a new assay (VERSANT HCV RNA 3.0 [bDNA 3.0] assay [Bayer Diagnostics]) to quantitate HCV RNA levels and compared the results of the bDNA 3.0 assay to results of the Quantiplex HCV RNA 2.0 (bDNA 2.0) assay. Samples used in this study included 211 serum specimens from hepatitis C virus (HCV)-infected persons from two sites (Bordeaux and Marseille, France) with different genotypes; 383 serum specimens from HCV antibody-negative, HCV RNA-negative persons; and serial dilutions of World Health Organization (WHO) HCV RNA standard at a titer of 100,000 IU/ml. The specificity of the bDNA 3.0 assay was 98.2%. A high correlation was observed between expected and observed values in all dilutions of WHO standard (r = 0.9982), in serial dilutions of pooled samples (r = 0.9996), and in diluted sera from different HCV genotypes (r = 0.9930 to 0.9995). The standard deviations (SD) for the within-run and between-run reproducibility of the bDNA 3.0 assay were <or=0.2 and <or=0.14, respectively. The intersite SD ranged from 0.03 to 0.14. The bDNA 3.0 assay results were positively correlated with the bDNA 2.0 assay results (r = 0.9533). Taking in account the overall performance, this assay could be used as a routine tool for the HCV RNA quantification.
MeSH Terms
Branched DNA Signal Amplification Assay/methods,standards
Hepacivirus/classification,genetics,isolation & purification
Hepatitis C/virology
Humans
RNA, Viral/blood
Reagent Kits, Diagnostic
Reproducibility of Results
Sensitivity and Specificity
Chemicals
RNA, Viral
Reagent Kits, Diagnostic
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Trimoulet Pascale
Laboratoire de Virologie, Centre Hospitalier Régional et Université Victor Segalen, CHU de Bordeaux, Bordeaux, France. pascale.trimoulet@chu-bordeaux.fr
Halfon Philippe
Pohier Eric
Khiri Hacène
Chêne Geneviève
Fleury Hervé
References (24)
24 references, click to expand
-
Quantification of serum hepatitis C virus RNA.
Hepatology. 1999 Mar;29(3):997-8
PMID: 10189235
-
Second generation of the automated Cobas Amplicor HCV assay improves sensitivity of hepatitis C virus RNA detection and yields results that are more clinically relevant.
J Clin Microbiol. 1999 May;37(5):1567-9
PMID: 10203523
-
Establishment of the first international standard for nucleic acid amplification technology (NAT) assays for HCV RNA. WHO Collaborative Study Group.
Vox Sang. 1999;76(3):149-58
PMID: 10341329
-
EASL International Consensus Conference on Hepatitis C. Paris, 26-28, February 1999, Consensus Statement. European Association for the Study of the Liver.
J Hepatol. 1999 May;30(5):956-61
PMID: 10365827
-
Quantification of hepatitis C virus RNA in serum by branched DNA-based signal amplification assays.
J Virol Methods. 1999 May;79(2):227-35
PMID: 10381092
-
Hepatitis C virus genotypes in France: relationship with epidemiology, pathogenicity and response to interferon therapy. The GEMHEP.
J Viral Hepat. 1999 Nov;6(6):435-43
PMID: 10607261
-
Multicenter comparison of Roche COBAS AMPLICOR MONITOR version 1.5, Organon Teknika NucliSens QT with Extractor, and Bayer Quantiplex version 3.0 for quantification of human immunodeficiency virus type 1 RNA in plasma.
J Clin Microbiol. 2000 Nov;38(11):4034-41
PMID: 11060065
-
The natural history of community-acquired hepatitis C in the United States. The Sentinel Counties Chronic non-A, non-B Hepatitis Study Team.
N Engl J Med. 1992 Dec 31;327(27):1899-905
PMID: 1280771
-
Isolation of a cDNA clone derived from a blood-borne non-A, non-B viral hepatitis genome.
Science. 1989 Apr 21;244(4902):359-62
PMID: 2523562
-
Pretreatment serum hepatitis C virus RNA levels and hepatitis C virus genotype are the main and independent prognostic factors of sustained response to interferon alfa therapy in chronic hepatitis C.
Hepatology. 1995 Oct;22(4 Pt 1):1050-6
PMID: 7557850
-
Implications of variations of "conserved" regions of hepatitis C virus genome.
Lancet. 1995 Aug 12;346(8972):425-6
PMID: 7623576
-
Improvement of hepatitis C virus RNA polymerase chain reaction through a multicentre quality control study. French Study Group for the Standardization of Hepatitis C Virus PCR.
J Virol Methods. 1994 Aug;49(1):79-88
PMID: 7829594
-
Reliability of polymerase chain reaction for detection of hepatitis C virus.
Lancet. 1993 Mar 20;341(8847):722-4
PMID: 8095626
-
Distribution of hepatitis C virus genotypes determined by line probe assay in patients with chronic hepatitis C seen at tertiary referral centers in the United States. Hepatitis Interventional Therapy Group.
Ann Intern Med. 1996 May 15;124(10):868-76
PMID: 8610915
-
Comparison of two quantitative hepatitis C virus reverse transcriptase PCR assays.
J Clin Microbiol. 1996 Feb;34(2):261-4
PMID: 8788997
-
Accurate quantification of hepatitis C virus (HCV) RNA from all HCV genotypes by using branched-DNA technology.
J Clin Microbiol. 1996 Apr;34(4):901-7
PMID: 8815105
-
Diagnostic tests for hepatitis C.
Hepatology. 1997 Sep;26(3 Suppl 1):43S-47S
PMID: 9305663
-
Factors predictive of a beneficial response to therapy of hepatitis C.
Hepatology. 1997 Sep;26(3 Suppl 1):122S-127S
PMID: 9305676
-
What strategy should be used for diagnosis of hepatitis C virus infection in clinical laboratories?
Hepatology. 1998 Jun;27(6):1700-2
PMID: 9620345
-
Predictors of sustained response to alpha interferon therapy in chronic hepatitis C.
J Hepatol. 1998 Aug;29(2):214-23
PMID: 9722202
-
Randomised trial of interferon alpha2b plus ribavirin for 48 weeks or for 24 weeks versus interferon alpha2b plus placebo for 48 weeks for treatment of chronic infection with hepatitis C virus. International Hepatitis Interventional Therapy Group (IHIT)
Lancet. 1998 Oct 31;352(9138):1426-32
PMID: 9807989
-
Interferon alfa-2b alone or in combination with ribavirin as initial treatment for chronic hepatitis C. Hepatitis Interventional Therapy Group.
N Engl J Med. 1998 Nov 19;339(21):1485-92
PMID: 9819446
-
Interferon alfa-2b alone or in combination with ribavirin for the treatment of relapse of chronic hepatitis C. International Hepatitis Interventional Therapy Group.
N Engl J Med. 1998 Nov 19;339(21):1493-9
PMID: 9819447
-
Comparative evaluation of hepatitis C virus RNA quantitation by branched DNA, NASBA, and monitor assays.
Hepatology. 1999 Feb;29(2):528-35
PMID: 9918931