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PMID: 14702310 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Molecular and functional characterization of a unique sucrose hydrolase from Xanthomonas axonopodis pv. glycines.

Journal of bacteriology ·Vol. 186 ·No. 2 ·2004-01-00 ·Pages 411-8

Kim HS, Park HJ, Heu S, Jung J

Abstract

A novel sucrose hydrolase (SUH) from Xanthomonas axonopodis pv. glycines, a causative agent of bacterial pustule disease on soybeans, was studied at the functional and molecular levels. SUH was shown to act rather specifically on sucrose (K(m) = 2.5 mM) but not on sucrose-6-phosphate. Protein analysis of purified SUH revealed that, in this monomeric enzyme with an estimated molecular mass of 70,223 +/- 12 Da, amino acid sequences determined for several segments have corresponding nucleotide sequences in XAC3490, a protein-coding gene found in the genome of X. axonopodis pv. citri. Based on this information, the SUH gene, consisting of an open reading frame of 1,935 bp, was cloned by screening a genomic library of X. axonopodis pv. glycines 8ra. Database searches and sequence comparison revealed that SUH has significant homology to some family 13 enzymes, with all of the crucial invariant residues involved in the catalytic mechanism conserved, but it shows no similarity to known invertases belonging to family 32. suh expression in X. axonopodis pv. glycines requires sucrose induction, and insertional mutagenesis resulted in an absence of sucrose-inducible sucrose hydrolase activity in crude protein extracts and a sucrose-negative phenotype. Recombinant SUH, overproduced in Escherichia coli and purified, was shown to have the same enzymatic characteristics in terms of kinetic parameters.

MeSH Terms
Amino Acid Sequence Culture Media Hydrolases/chemistry,metabolism Hydrolysis Molecular Sequence Data Phosphoenolpyruvate Sugar Phosphotransferase System/physiology Sucrose/metabolism Xanthomonas/enzymology
Chemicals
Culture Media Sucrose Phosphoenolpyruvate Sugar Phosphotransferase System Hydrolases
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Kim Hong-Suk
School of Agricultural Biotechnology, Seoul National University, Seoul 151-742, South Korea.
Park Hyoung-Joon
Heu Sunggi
Jung Jin
References (40)
40 references, click to expand
  1. The DNA sequence of the gene for the secreted Bacillus subtilis enzyme levansucrase and its genetic control sites.
    Mol Gen Genet. 1985;200(2):220-8 PMID: 2993818
  2. Identification of key amino acid residues in Neisseria polysaccharea amylosucrase.
    FEBS Lett. 2000 May 26;474(1):33-7 PMID: 10828446
  3. Sucrose transporters in plants: update on function and structure.
    Biochim Biophys Acta. 2000 May 1;1465(1-2):246-62 PMID: 10748258
  4. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  5. The molecular genetics of virulence of Xanthomonas campestris.
    Biotechnol Adv. 1999 Nov;17(6):489-508 PMID: 14538126
  6. Comparison of the genomes of two Xanthomonas pathogens with differing host specificities.
    Nature. 2002 May 23;417(6887):459-63 PMID: 12024217
  7. New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.
    Biochem J. 1993 Aug 1;293 ( Pt 3):781-8 PMID: 8352747
  8. Amylosucrase from Neisseria polysaccharea: novel catalytic properties.
    FEBS Lett. 2000 Apr 14;471(2-3):219-23 PMID: 10767427
  9. Sucrose uptake is driven by the Na+ electrochemical potential in the marine bacterium Vibrio alginolyticus.
    J Bacteriol. 1985 Sep;163(3):1293-5 PMID: 4030698
  10. Cloning and characterization of the gene for amylosucrase from Neisseria polysaccharea: production of a linear alpha-1,4-glucan.
    J Bacteriol. 1997 May;179(10):3324-30 PMID: 9150231
  11. Adaptation of sucrose metabolism in the Escherichia coli wild-type strain EC3132.
    J Bacteriol. 2002 Oct;184(19):5307-16 PMID: 12218016
  12. Phosphoenolpyruvate:carbohydrate phosphotransferase systems of bacteria.
    Microbiol Rev. 1993 Sep;57(3):543-94 PMID: 8246840
  13. Analysis of the gene for beta-fructosidase (invertase, inulinase) of the hyperthermophilic bacterium Thermotoga maritima, and characterisation of the enzyme expressed in Escherichia coli.
    Appl Microbiol Biotechnol. 1998 Jul;50(1):55-64 PMID: 9720201
  14. Transposon-encoded sucrose metabolism in Lactococcus lactis. Purification of sucrose-6-phosphate hydrolase and genetic linkage to N5-(L-1-carboxyethyl)-L-ornithine synthase in strain K1.
    J Biol Chem. 1991 Aug 5;266(22):14573-9 PMID: 1650362
  15. Complete genome sequence of the marine planctomycete Pirellula sp. strain 1.
    Proc Natl Acad Sci U S A. 2003 Jul 8;100(14):8298-303 PMID: 12835416
  16. Characterization of the levanase gene of Bacillus subtilis which shows homology to yeast invertase.
    Mol Gen Genet. 1987 Jun;208(1-2):177-84 PMID: 3112519
  17. Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1.
    Science. 1999 Nov 19;286(5444):1571-7 PMID: 10567266
  18. Sucrose transport by Streptococcus mutans. Evidence for multiple transport systems.
    Biochim Biophys Acta. 1982 Nov 22;692(3):415-24 PMID: 7171603
  19. Expression and regulation of a Vibrio alginolyticus sucrose utilization system cloned in Escherichia coli.
    J Bacteriol. 1987 Jun;169(6):2685-90 PMID: 3034863
  20. Identification and enzymatic characterization of the maltose-inducible alpha-glucosidase MalL (sucrase-isomaltase-maltase) of Bacillus subtilis.
    J Bacteriol. 1998 May;180(9):2574-8 PMID: 9573215
  21. Protein engineering in the alpha-amylase family: catalytic mechanism, substrate specificity, and stability.
    Plant Mol Biol. 1994 May;25(2):141-57 PMID: 8018865
  22. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  23. Molecular analysis of the scrA and scrB genes from Klebsiella pneumoniae and plasmid pUR400, which encode the sucrose transport protein Enzyme II Scr of the phosphotransferase system and a sucrose-6-phosphate invertase.
    Mol Gen Genet. 1996 Feb 5;250(2):197-206 PMID: 8628219
  24. Sequence analysis of the Streptococcus mutans scrB gene.
    Infect Immun. 1988 Aug;56(8):1956-60 PMID: 3397182
  25. Basic local alignment search tool.
    J Mol Biol. 1990 Oct 5;215(3):403-10 PMID: 2231712
  26. Sequence analysis of the gene encoding amylosucrase from Neisseria polysaccharea and characterization of the recombinant enzyme.
    J Bacteriol. 1999 Jan;181(2):375-81 PMID: 9882648
  27. The Bacillus stearothermophilus NUB36 surA gene encodes a thermophilic sucrase related to Bacillus subtilis SacA.
    Microbiology. 1996 Jul;142 ( Pt 7):1651-7 PMID: 8757729
  28. Cloning and sequencing of the sacA gene: characterization of a sucrase from Zymomonas mobilis.
    J Bacteriol. 1990 Dec;172(12):6727-35 PMID: 2254250
  29. Nucleotide sequence of the sucrase gene of Bacillus subtilis.
    Gene. 1986;45(2):221-5 PMID: 3100393
  30. Chromosomal location of mutations affecting sucrose metabolism in Bacillus subtilis Marburg.
    Mol Gen Genet. 1972;118(2):135-60 PMID: 4628133
  31. Complete genome sequence of Caulobacter crescentus.
    Proc Natl Acad Sci U S A. 2001 Mar 27;98(7):4136-41 PMID: 11259647
  32. Characterization of a chromosomally encoded, non-PTS metabolic pathway for sucrose utilization in Escherichia coli EC3132.
    Mol Gen Genet. 1992 Oct;235(1):22-32 PMID: 1435727
  33. Molecular analysis of sucrose metabolism of Erwinia amylovora and influence on bacterial virulence.
    J Bacteriol. 2000 Oct;182(19):5351-8 PMID: 10986236
  34. Amylosucrase, a glucan-synthesizing enzyme from the alpha-amylase family.
    J Biol Chem. 2001 Jul 6;276(27):25273-8 PMID: 11306569
  35. Relationship of sequence and structure to specificity in the alpha-amylase family of enzymes.
    Biochim Biophys Acta. 2001 Mar 9;1546(1):1-20 PMID: 11257505
  36. Structures and mechanisms of glycosyl hydrolases.
    Structure. 1995 Sep 15;3(9):853-9 PMID: 8535779
  37. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
    Nucleic Acids Res. 1994 Nov 11;22(22):4673-80 PMID: 7984417
  38. Molecular characterization of cloned avirulence genes from race 0 and race 1 of Pseudomonas syringae pv. glycinea.
    J Bacteriol. 1987 Dec;169(12):5789-94 PMID: 2824447
  39. Crystal structures of amylosucrase from Neisseria polysaccharea in complex with D-glucose and the active site mutant Glu328Gln in complex with the natural substrate sucrose.
    Biochemistry. 2001 Jul 31;40(30):9032-9 PMID: 11467966
  40. Cariogenicity of Streptococcus mutans V403 glucosyltransferase and fructosyltransferase mutants constructed by allelic exchange.
    Infect Immun. 1991 Jul;59(7):2316-23 PMID: 1828790
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
2004-01-00
Pages
411-8
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC305769
Subset
IM
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