Home LiteratureArticle Details
PMID: 14576291 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Toward the analysis of the petunia MADS box gene family by reverse and forward transposon insertion mutagenesis approaches: B, C, and D floral organ identity functions require SEPALLATA-like MADS box genes in petunia.

The Plant cell ·Vol. 15 ·No. 11 ·2003-11-00 ·Pages 2680-93

Vandenbussche M, Zethof J, Souer E, Koes R, Tornielli GB, Pezzotti M, Ferrario S, Angenent GC, Gerats T

Abstract

We have initiated a systematic functional analysis of the MADS box, intervening region, K domain, C domain-type MADS box gene family in petunia. The starting point for this has been a reverse-genetics approach, aiming to select for transposon insertions into any MADS box gene. We have developed and applied a family signature insertion screening protocol that is highly suited for this purpose, resulting in the isolation of 32 insertion mutants in 20 different MADS box genes. In addition, we identified three more MADS box gene insertion mutants using a candidate-gene approach. The defined insertion lines provide a sound foundation for a systematic functional analysis of the MADS box gene family in petunia. Here, we focus on the analysis of Floral Binding Protein2 (FBP2) and FBP5 genes that encode the E-function, which in Arabidopsis has been shown to be required for B and C floral organ identity functions. fbp2 mutants display sepaloid petals and ectopic inflorescences originating from the third floral whorl, whereas fbp5 mutants appear as wild type. In fbp2 fbp5 double mutants, reversion of floral organs to leaf-like organs is increased further. Strikingly, ovules are replaced by leaf-like structures in the carpel, indicating that in addition to the B- and C-functions, the D-function, which specifies ovule development, requires E-function activity. Finally, we compare our data with results obtained using cosuppression approaches and conclude that the latter might be less suited for assigning functions to individual members of the MADS box gene family.

MeSH Terms
Alleles Base Sequence DNA Transposable Elements/genetics Flowers/genetics,physiology MADS Domain Proteins/genetics,metabolism Molecular Sequence Data Mutagenesis, Insertional Mutation Petunia/genetics,physiology Phenotype Phylogeny Plant Proteins/genetics,metabolism Sequence Homology, Nucleic Acid
Chemicals
DNA Transposable Elements MADS Domain Proteins Plant Proteins fbp2 protein, Petunia x hybrida
Authors & Affiliations
9 authors, click to expand affiliations / ORCID
Vandenbussche Michiel
Department of Plant Systems Biology, Vlaams Instituut voor Biotechnologie/Ghent University, Zwijnaarde, Belgium.
Zethof Jan
Souer Erik
Koes Ronald
Tornielli Giovanni B
Pezzotti Mario
Ferrario Silvia
Angenent Gerco C
Gerats Tom
References (60)
60 references, click to expand
  1. Redundant regulation of meristem identity and plant architecture by FRUITFULL, APETALA1 and CAULIFLOWER.
    Development. 2000 Feb;127(4):725-34 PMID: 10648231
  2. Plant biology. Floral quartets.
    Nature. 2001 Jan 25;409(6819):469-71 PMID: 11206529
  3. Genetic Control of Flower Development by Homeotic Genes in Antirrhinum majus.
    Science. 1990 Nov 16;250(4983):931-6 PMID: 17746916
  4. Arabidopsis gene knockout: phenotypes wanted.
    Curr Opin Plant Biol. 2001 Apr;4(2):111-7 PMID: 11228432
  5. Systematic reverse genetics of transfer-DNA-tagged lines of Arabidopsis. Isolation of mutations in the cytochrome p450 gene superfamily.
    Plant Physiol. 1998 Nov;118(3):743-50 PMID: 9808718
  6. Ternary complex formation between the MADS-box proteins SQUAMOSA, DEFICIENS and GLOBOSA is involved in the control of floral architecture in Antirrhinum majus.
    EMBO J. 1999 Oct 1;18(19):5370-9 PMID: 10508169
  7. Analysis of MADS box protein-protein interactions in living plant cells.
    Proc Natl Acad Sci U S A. 2002 Feb 19;99(4):2416-21 PMID: 11854533
  8. Functional divergence within the APETALA3/PISTILLATA floral homeotic gene lineages.
    Proc Natl Acad Sci U S A. 2003 May 27;100(11):6558-63 PMID: 12746493
  9. The neighbor-joining method: a new method for reconstructing phylogenetic trees.
    Mol Biol Evol. 1987 Jul;4(4):406-25 PMID: 3447015
  10. Functional analysis of petunia floral homeotic MADS box gene pMADS1.
    Genes Dev. 1993 Jul;7(7A):1214-28 PMID: 8100547
  11. The protein encoded by the Arabidopsis homeotic gene agamous resembles transcription factors.
    Nature. 1990 Jul 5;346(6279):35-9 PMID: 1973265
  12. The petunia MADS box gene FBP11 determines ovule identity.
    Plant Cell. 1995 Nov;7(11):1859-68 PMID: 8535139
  13. Organ identity genes and modified patterns of flower development in Gerbera hybrida (Asteraceae)
    Plant J. 1999 Jan;17(1):51-62 PMID: 10069067
  14. Co-suppression of the petunia homeotic gene fbp2 affects the identity of the generative meristem.
    Plant J. 1994 Jan;5(1):33-44 PMID: 7907515
  15. Non-random distribution of transposable elements in the nuclear genome of plants.
    Nucleic Acids Res. 1993 May 25;21(10):2369-73 PMID: 8389439
  16. Function search in a large transcription factor gene family in Arabidopsis: assessing the potential of reverse genetics to identify insertional mutations in R2R3 MYB genes.
    Plant Cell. 1999 Oct;11(10):1827-40 PMID: 10521515
  17. Transposon Display identifies individual transposable elements in high copy number lines.
    Plant J. 1998 Jan;13(1):121-9 PMID: 17655648
  18. Molecular basis of the cauliflower phenotype in Arabidopsis.
    Science. 1995 Jan 27;267(5197):522-5 PMID: 7824951
  19. Introduction of a Chimeric Chalcone Synthase Gene into Petunia Results in Reversible Co-Suppression of Homologous Genes in trans.
    Plant Cell. 1990 Apr;2(4):279-289 PMID: 12354959
  20. Flavonoid genes in petunia: addition of a limited number of gene copies may lead to a suppression of gene expression.
    Plant Cell. 1990 Apr;2(4):291-9 PMID: 2152117
  21. Role of petunia pMADS3 in determination of floral organ and meristem identity, as revealed by its loss of function.
    Plant J. 2002 Oct;32(1):115-27 PMID: 12366805
  22. A novel class of MADS box genes is involved in ovule development in petunia.
    Plant Cell. 1995 Oct;7(10):1569-82 PMID: 7580252
  23. 'Touchdown' PCR to circumvent spurious priming during gene amplification.
    Nucleic Acids Res. 1991 Jul 25;19(14):4008 PMID: 1861999
  24. SHATTERPROOF MADS-box genes control seed dispersal in Arabidopsis.
    Nature. 2000 Apr 13;404(6779):766-70 PMID: 10783890
  25. Mu1-related transposable elements of maize preferentially insert into low copy number DNA.
    Genetics. 1995 May;140(1):315-24 PMID: 7635296
  26. Analysis of the petunia MADS-box transcription factor family.
    Mol Genet Genomics. 2003 Feb;268(5):598-606 PMID: 12589434
  27. An Arabidopsis MADS box gene that controls nutrient-induced changes in root architecture.
    Science. 1998 Jan 16;279(5349):407-9 PMID: 9430595
  28. Petal and stamen formation in petunia is regulated by the homeotic gene fbp1.
    Plant J. 1993 Jul;4(1):101-12 PMID: 8106081
  29. A petunia MADS box gene involved in the transition from vegetative to reproductive development.
    Development. 1999 Nov;126(22):5117-26 PMID: 10529428
  30. Analysis of flower pigmentation mutants generated by random transposon mutagenesis in Petunia hybrida.
    Plant J. 1998 Jan;13(1):39-50 PMID: 9680963
  31. An ancestral MADS-box gene duplication occurred before the divergence of plants and animals.
    Proc Natl Acad Sci U S A. 2000 May 9;97(10):5328-33 PMID: 10805792
  32. Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world.
    Plant Cell. 2003 Jul;15(7):1538-51 PMID: 12837945
  33. B and C floral organ identity functions require SEPALLATA MADS-box genes.
    Nature. 2000 May 11;405(6783):200-3 PMID: 10821278
  34. Maximizing sensitivity and specificity of PCR by pre-amplification heating.
    Nucleic Acids Res. 1991 Jul 11;19(13):3749 PMID: 1852616
  35. The MADS box gene FBP2 is required for SEPALLATA function in petunia.
    Plant Cell. 2003 Apr;15(4):914-25 PMID: 12671087
  36. Evolution of genetic mechanisms controlling petal development.
    Nature. 1999 May 13;399(6732):144-8 PMID: 10335842
  37. Complexes of MADS-box proteins are sufficient to convert leaves into floral organs.
    Nature. 2001 Jan 25;409(6819):525-9 PMID: 11206550
  38. Floral homeotic genes were recruited from homologous MADS-box genes preexisting in the common ancestor of ferns and seed plants.
    Proc Natl Acad Sci U S A. 1997 Mar 18;94(6):2415-20 PMID: 9122209
  39. MADS-box genes in plant ontogeny and phylogeny: Haeckel's 'biogenetic law' revisited.
    Curr Opin Genet Dev. 1995 Oct;5(5):628-39 PMID: 8664551
  40. Conifer homologues to genes that control floral development in angiosperms.
    Plant Mol Biol. 1995 Jan;27(1):69-78 PMID: 7865797
  41. Molecular characterization of a nonautonomous transposable element (dTph1) of petunia.
    Plant Cell. 1990 Nov;2(11):1121-8 PMID: 1967052
  42. Beyond the ABCs: ternary complex formation in the control of floral organ identity.
    Trends Plant Sci. 2000 Nov;5(11):471-6 PMID: 11077255
  43. Structural diversification and neo-functionalization during floral MADS-box gene evolution by C-terminal frameshift mutations.
    Nucleic Acids Res. 2003 Aug 1;31(15):4401-9 PMID: 12888499
  44. Assessing the redundancy of MADS-box genes during carpel and ovule development.
    Nature. 2003 Jul 3;424(6944):85-8 PMID: 12840762
  45. Inhibition of flower pigmentation by antisense CHS genes: promoter and minimal sequence requirements for the antisense effect.
    Plant Mol Biol. 1990 Apr;14(4):457-66 PMID: 2102827
  46. A short history of MADS-box genes in plants.
    Plant Mol Biol. 2000 Jan;42(1):115-49 PMID: 10688133
  47. Analysis by Transposon Display of the behavior of the dTph1 element family during ontogeny and inbreeding of Petunia hybrida.
    Mol Genet Genomics. 2001 Mar;265(1):72-81 PMID: 11370875
  48. Functional genomics in plants.
    Plant Physiol. 1998 Nov;118(3):725-32 PMID: 9808716
  49. Molecular evolution of flower development: diversification of the plant MADS-box regulatory gene family.
    Genetics. 1995 May;140(1):345-56 PMID: 7635298
  50. Insertion mutagenesis and study of transposable elements using a new unstable virescent seedling allele for isolation of haploid petunia lines.
    Plant J. 1996 Sep;10(3):533-44 PMID: 8811867
  51. Ovule-specific MADS-box proteins have conserved protein-protein interactions in monocot and dicot plants.
    Mol Genet Genomics. 2002 Oct;268(2):152-9 PMID: 12395189
  52. MADS-box genes reveal that gnetophytes are more closely related to conifers than to flowering plants.
    Proc Natl Acad Sci U S A. 1999 Jun 22;96(13):7342-7 PMID: 10377416
  53. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
    Nucleic Acids Res. 1994 Nov 11;22(22):4673-80 PMID: 7984417
  54. The TM5 MADS Box Gene Mediates Organ Differentiation in the Three Inner Whorls of Tomato Flowers.
    Plant Cell. 1994 Feb;6(2):175-186 PMID: 12244235
  55. Classification and phylogeny of the MADS-box multigene family suggest defined roles of MADS-box gene subfamilies in the morphological evolution of eukaryotes.
    J Mol Evol. 1996 Nov;43(5):484-516 PMID: 8875863
  56. Targeted gene inactivation in petunia by PCR-based selection of transposon insertion mutants.
    Proc Natl Acad Sci U S A. 1995 Aug 29;92(18):8149-53 PMID: 7667260
  57. Downregulation of ovule-specific MADS box genes from petunia results in maternally controlled defects in seed development.
    Plant Cell. 1997 May;9(5):703-15 PMID: 9165748
  58. The war of the whorls: genetic interactions controlling flower development.
    Nature. 1991 Sep 5;353(6339):31-7 PMID: 1715520
  59. Control of Arabidopsis flower and seed development by the homeotic gene APETALA2.
    Plant Cell. 1994 Sep;6(9):1211-25 PMID: 7919989
  60. Relearning our ABCs: new twists on an old model.
    Trends Plant Sci. 2001 Jul;6(7):310-6 PMID: 11435170
Article Info
Journal
The Plant cell
Abbr.
Plant Cell
ISSN
1040-4651
Published
2003-11-00
Epub
2003-00-23
Pages
2680-93
Language
English
Region
England
NLM ID
9208688
PMCID
PMC280571
Subset
IM
Databases
GENBANK
AY283799, AY307510, AY307511, AY307512, AY307513, AY307514, AY307515, AY307516, AY307517, AY370519, AY370520, AY370521, AY370522, AY370523, AY370524, AY370525, AY370526, AY370527, AY370528, AY370529
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com