Abstract
Fluorescence correlation spectroscopy (FCS) has been used to measure the diffusion of fluorescently labeled beads in solutions of polymerized actin or buffer. The results, obtained at actin concentrations of 1 mg/ml, show that small beads (0.09 micron in diameter) diffuse nearly as rapidly in the actin gel as in buffer, whereas the largest beads tested (0.5 micron in diameter) are immobilized. Measured autocorrelation times for motions of beads with intermediate sizes show that the diffusion is retarded (relative to buffer) and that the time behavior cannot be represented as a single diffusive process. In addition to the retarded diffusion observed over distances > 1 micron, 0.23-micron beads also show a faster motion over smaller distances. Based on the measured rate of this faster motion, we estimate that the beads may be constrained within a cage approximately 0.67 micron on a side, equal to a filament length of approximately 250 subunits. Fluorescence correlation spectroscopy measurements made in the same small spot (radius of 1.4 microns) of the gel vary over time. From the variations of both the autocorrelation functions and the mean fluorescence, we conclude that, corresponding to a spatial scale of 1.4 microns, the actin gel is a dynamic structure with slow rearrangement of the gel occurring over periods of 20-50 s at 21-22 degrees C. This rearrangement may result from local reorganization of the actin matrix. Data for the retardation of beads by the actin gel are consistent with a detailed theory of the diffusion of particles through solutions of rigid rods that have longitudinal diffusion coefficients much less than that of the particles (Ogston, A. G., B. N. Preston, and J. D. Wells. 1973. Proc. R. Soc. Lond. A. 333:297-316).
MeSH Terms
Actins/chemistry,metabolism
Gels
Kinetics
Macromolecular Substances
Magnesium/pharmacology
Protein Conformation
Spectrometry, Fluorescence/methods
Time Factors
Chemicals
Actins
Gels
Macromolecular Substances
Magnesium
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Qian H
Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110.
Elson E L
Frieden C
References (31)
31 references, click to expand
-
Open channel noise. VI. Analysis of amplitude histograms to determine rapid kinetic parameters.
Biophys J. 1991 Sep;60(3):577-87
PMID: 1718467
-
Lateral diffusion of proteins in membranes.
Annu Rev Physiol. 1987;49:163-75
PMID: 3551795
-
Dynamics of F-actin and F-actin/filamin networks as studied by photon correlation spectroscopy.
Biopolymers. 1990;30(7-8):677-89
PMID: 2275972
-
Concentration correlation spectroscopy: a new biophysical probe based on occupation number fluctuations.
Annu Rev Biophys Bioeng. 1975;4(00):311-34
PMID: 1098559
-
Dynamic light scattering measurements of the diffusion of probes in filamentous actin solutions.
Biopolymers. 1989 Feb;28(2):655-66
PMID: 2713456
-
Nonmuscle actin-binding proteins.
Annu Rev Cell Biol. 1985;1:353-402
PMID: 3030380
-
The submicroscopic properties of cytoplasm as a determinant of cellular function.
Annu Rev Biophys Biophys Chem. 1988;17:369-96
PMID: 3293592
-
Actin and actin-binding proteins. A critical evaluation of mechanisms and functions.
Annu Rev Biochem. 1986;55:987-1035
PMID: 3527055
-
Actin and tubulin polymerization: the use of kinetic methods to determine mechanism.
Annu Rev Biophys Biophys Chem. 1985;14:189-210
PMID: 3890879
-
Quasi-elastic scattering of laser light. A new tool for the dynamic study of biological macromolecules.
Adv Biophys. 1972;3:1-43
PMID: 4578839
-
Cytochalasin D and platelet gelsolin accelerate actin polymer formation. A model for regulation of the extent of actin polymer formation in vivo.
Biochemistry. 1982 Jun 22;21(13):3207-14
PMID: 6285961
-
Physical basis of the rheologic properties of F-actin.
J Biol Chem. 1983 Sep 25;258(18):11004-9
PMID: 6885809
-
Polymerization and gelation of actin studied by fluorescence photobleaching recovery.
Biochemistry. 1982 Jul 20;21(15):3666-74
PMID: 7115692
-
Long tail kinetics in biophysics?
Biophys J. 1992 Aug;63(2):366-70
PMID: 1420883
-
Viscoelastic properties of vimentin compared with other filamentous biopolymer networks.
J Cell Biol. 1991 Apr;113(1):155-60
PMID: 2007620
-
On the statistics of fluorescence correlation spectroscopy.
Biophys Chem. 1990 Oct;38(1-2):49-57
PMID: 2085652
-
Mechanical properties of actin.
J Biol Chem. 1985 Jul 15;260(14):8585-92
PMID: 4008500
-
The regulation of rabbit skeletal muscle contraction. I. Biochemical studies of the interaction of the tropomyosin-troponin complex with actin and the proteolytic fragments of myosin.
J Biol Chem. 1971 Aug 10;246(15):4866-71
PMID: 4254541
-
Actin polymerization and its regulation by proteins from nonmuscle cells.
Physiol Rev. 1982 Apr;62(2):672-737
PMID: 6280220
-
Actin polymerization. The effect of brevin on filament size and rate of polymerization.
J Biol Chem. 1984 Oct 10;259(19):11868-75
PMID: 6480587
-
Identification of a factor in conventional muscle actin preparations which inhibits actin filament self-association.
Biochem Biophys Res Commun. 1980 Sep 16;96(1):18-27
PMID: 6893667
-
The flexibility of F-actin.
Biophys Chem. 1980 Jun;11(3-4):443-6
PMID: 6996755
-
Gels.
Sci Am. 1981 Jan;244(1):124-36, 138
PMID: 7209484
-
Tracer diffusion in F-actin and Ficoll mixtures. Toward a model for cytoplasm.
Biophys J. 1990 Jul;58(1):31-43
PMID: 2116926
-
On the analysis of high order moments of fluorescence fluctuations.
Biophys J. 1990 Feb;57(2):375-80
PMID: 2317556
-
Interpretation of fluorescence correlation spectroscopy and photobleaching recovery in terms of molecular interactions.
Methods Cell Biol. 1989;30:307-32
PMID: 2648114
-
Structure and mobility of actin filaments as measured by quasielastic light scattering, viscometry, and electron microscopy.
J Biol Chem. 1986 Jun 25;261(18):8357-62
PMID: 3013849
-
Cortical flow in animal cells.
Science. 1988 Feb 19;239(4842):883-8
PMID: 3277283
-
Cellular mechanics as an indicator of cytoskeletal structure and function.
Annu Rev Biophys Biophys Chem. 1988;17:397-430
PMID: 3293593
-
Diffusion of small solutes in polymer-containing solutions.
Science. 1988 Jul 15;241(4863):330-2
PMID: 3388042
-
Brownian motion of inert tracer macromolecules in polymerized and spontaneously bundled mixtures of actin and filamin.
J Cell Biol. 1990 May;110(5):1645-54
PMID: 2110570