ProSplicer: a database of putative alternative splicing information derived from protein, mRNA and expressed sequence tag sequence data.

Genome biology ·Vol. 4 ·No. 4 ·2003-00-00 ·Pages R29

Huang HD, Horng JT, Lee CC, Liu BJ

Abstract

ProSplicer is a database of putative alternative splicing information derived from the alignment of proteins, mRNA sequences and expressed sequence tags (ESTs) against human genomic DNA sequences. Proteins, mRNA and ESTs provide valuable evidence that can reveal splice variants of genes. The alternative splicing information in the database can help users investigate the alternative splicing and tissue-specific expression of genes.

MeSH Terms

Alternative Splicing Computer Graphics Databases, Genetic Expressed Sequence Tags Genome, Human Humans Proteins/chemistry RNA Splice Sites RNA, Messenger/chemistry Sequence Alignment Software User-Computer Interface

Chemicals

Proteins RNA Splice Sites RNA, Messenger

Authors & Affiliations

4 authors, click to expand affiliations / ORCID

Huang Hsien-Da

Department of Computer Science and Information Engineering, National Central University, Jung-Li City 320, Taiwan.

Horng Jorng-Tzong

Lee Chau-Chin

Liu Baw-Jhiune

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18 references, click to expand

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Article Info

Journal

Genome biology

Abbr.

Genome Biol

ISSN

1474-760X

DOI

10.1186/gb-2003-4-4-r29

Published

2003-00-00

Epub

2003-00-14

Pages

R29

Language

English

Region

England

NLM ID

100960660

PMCID

PMC154580

Subset

External Links

PubMed source DOI: 10.1186/gb-2003-4-4-r29 PMC Full Text View journal details

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ProSplicer: a database of putative alternative splicing information derived from protein, mRNA and expressed sequence tag sequence data.

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