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PMID: 10592178 Published · ppublish English Journal Article

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

Nucleic acids research ·Vol. 28 ·No. 1 ·2000-01-01 ·Pages 45-8

Bairoch A, Apweiler R

Abstract

SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotation (such as the description of the function of a protein, its domains structure, post-translational modifications, variants, etc.), a minimal level of redundancy and high level of integration with other databases. Recent developments of the database include format and content enhancements, cross-references to additional databases, new documentation files and improvements to TrEMBL, a computer-annotated supplement to SWISS-PROT. TrEMBL consists of entries in SWISS-PROT-like format derived from the translation of all coding sequences (CDSs) in the EMBL Nucleotide Sequence Database, except the CDSs already included in SWISS-PROT. We also describe the Human Proteomics Initiative (HPI), a major project to annotate all known human sequences according to the quality standards of SWISS-PROT. SWISS-PROT is available at: http://www.expasy.ch/sprot/ and http://www.ebi.ac.uk/swissprot/

MeSH Terms
Animals Databases, Factual Genome Humans Proteins/chemistry,genetics,metabolism Systems Integration
Chemicals
Proteins
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Bairoch A
Swiss Institute of Bioinformatics, Centre Medical Universitaire, 1 rue Michel Servet, 1211 Geneva 4, Switzerland. amos.bairoch@medecine.unige.ch
Apweiler R
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Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
2000-01-01
Pages
45-8
Language
English
Region
England
NLM ID
0411011
PMCID
PMC102476
Subset
IM
Analysis Services
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