MatchMiner: a tool for batch navigation among gene and gene product identifiers.

Genome biology ·Vol. 4 ·No. 4 ·2003-00-00 ·Pages R27

Bussey KJ, Kane D, Sunshine M, Narasimhan S, Nishizuka S, Reinhold WC, Zeeberg B, Ajay W, Weinstein JN

Abstract

MatchMiner is a freely available program package for batch navigation among gene and gene product identifier types commonly encountered in microarray studies and other forms of 'omic' research. The user inputs a list of gene identifiers and then uses the Merge function to find the overlap with a second list of identifiers of either the same or a different type or uses the LookUp function to find corresponding identifiers.

MeSH Terms

Algorithms Computational Biology Databases, Genetic Genomics Humans In Situ Hybridization, Fluorescence Nucleic Acid Hybridization Oligonucleotide Array Sequence Analysis Proteins/genetics RNA/genetics Sequence Analysis, DNA Software Software Design

Chemicals

Proteins RNA

Authors & Affiliations

9 authors, click to expand affiliations / ORCID

Bussey Kimberly J

Genomics and Bioinformatics Group, Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, NIH Building 37, Bethesda, MD 20892-4255, USA.

Kane David

Sunshine Margot

Narasimhan Sudar

Nishizuka Satoshi

Reinhold William C

Zeeberg Barry

Ajay Weinstein

Weinstein John N

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9 references, click to expand

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Article Info

Journal

Genome biology

Abbr.

Genome Biol

ISSN

1474-760X

DOI

10.1186/gb-2003-4-4-r27

Published

2003-00-00

Epub

2003-00-25

Pages

R27

Language

English

Region

England

NLM ID

100960660

PMCID

PMC154578

Subset

External Links

PubMed source DOI: 10.1186/gb-2003-4-4-r27 PMC Full Text View journal details

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