-
Engineering precision RNA molecular switches.
Proc Natl Acad Sci U S A. 1999 Mar 30;96(7):3584-9
PMID: 10097080
-
Design of allosteric hammerhead ribozymes activated by ligand-induced structure stabilization.
Structure. 1999 Jul 15;7(7):783-91
PMID: 10425680
-
Aptamers: an emerging class of molecules that rival antibodies in diagnostics.
Clin Chem. 1999 Sep;45(9):1628-50
PMID: 10471678
-
A conserved RNA structure element involved in the regulation of bacterial riboflavin synthesis genes.
Trends Genet. 1999 Nov;15(11):439-42
PMID: 10529804
-
Allosteric selection of ribozymes that respond to the second messengers cGMP and cAMP.
Nat Struct Biol. 1999 Nov;6(11):1062-71
PMID: 10542100
-
Nucleic acid molecular switches.
Trends Biotechnol. 1999 Dec;17(12):469-76
PMID: 10557159
-
Adaptive recognition by nucleic acid aptamers.
Science. 2000 Feb 4;287(5454):820-5
PMID: 10657289
-
Design and optimization of effector-activated ribozyme ligases.
Nucleic Acids Res. 2000 Apr 15;28(8):1751-9
PMID: 10734194
-
Altering molecular recognition of RNA aptamers by allosteric selection.
J Mol Biol. 2000 May 12;298(4):623-32
PMID: 10788325
-
Allosteric nucleic acid catalysts.
Curr Opin Struct Biol. 2000 Jun;10(3):318-25
PMID: 10851196
-
In vitro selection of functional nucleic acids.
Annu Rev Biochem. 1999;68:611-47
PMID: 10872462
-
Construction of new ribozymes requiring short regulator oligonucleotides as a cofactor.
J Mol Biol. 2000 Jun 23;299(5):1231-43
PMID: 10873448
-
In vitro selection of nucleic acids for diagnostic applications.
J Biotechnol. 2000 Mar;74(1):15-25
PMID: 10943569
-
Nucleic acid aptamers-from selection in vitro to applications in vivo.
Acc Chem Res. 2000 Sep;33(9):591-9
PMID: 10995196
-
In vitro selection of signaling aptamers.
Nat Biotechnol. 2000 Dec;18(12):1293-7
PMID: 11101810
-
Cooperative binding of effectors by an allosteric ribozyme.
Nucleic Acids Res. 2001 Apr 1;29(7):1631-7
PMID: 11266567
-
Switching nucleic acids for antibodies.
Nat Biotechnol. 2001 Apr;19(4):313-4
PMID: 11283579
-
Immobilized RNA switches for the analysis of complex chemical and biological mixtures.
Nat Biotechnol. 2001 Apr;19(4):336-41
PMID: 11283591
-
Optimization and optimality of a short ribozyme ligase that joins non-Watson-Crick base pairings.
RNA. 2001 Apr;7(4):513-23
PMID: 11345430
-
Coupling between substrate binding and allosteric regulation in ribozyme catalysis.
Bioorg Med Chem. 2001 May;9(5):1155-63
PMID: 11377174
-
In vitro selection of nucleoprotein enzymes.
Nat Biotechnol. 2001 Jul;19(7):650-5
PMID: 11433277
-
A novel mode of regulation of an RNA-cleaving DNAzyme by effectors that bind to both enzyme and substrate.
J Mol Biol. 2001 Jul 20;310(4):723-34
PMID: 11453683
-
Do mRNAs act as direct sensors of small molecules to control their expression?
Proc Natl Acad Sci U S A. 2001 Aug 14;98(17):9465-7
PMID: 11504932
-
Detection of small organic analytes by fluorescing molecular switches.
Bioorg Med Chem. 2001 Oct;9(10):2521-4
PMID: 11557338
-
In vitro selection of allosteric ribozymes: theory and experimental validation.
J Mol Biol. 2001 Oct 5;312(5):1177-90
PMID: 11580234
-
An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans.
Science. 2001 Oct 26;294(5543):858-62
PMID: 11679671
-
RNA interference and small interfering RNAs.
Chembiochem. 2001 Apr 2;2(4):239-45
PMID: 11828450
-
Catalytic molecular beacons.
Chembiochem. 2001 Jun 1;2(6):411-5
PMID: 11828471
-
Engineered allosteric ribozymes as biosensor components.
Curr Opin Biotechnol. 2002 Feb;13(1):31-9
PMID: 11849955
-
A general approach for the use of oligonucleotide effectors to regulate the catalysis of RNA-cleaving ribozymes and DNAzymes.
Nucleic Acids Res. 2002 Apr 15;30(8):1735-42
PMID: 11937626
-
ATP-dependent allosteric DNA enzymes.
Chem Biol. 2002 Apr;9(4):417-26
PMID: 11983331
-
An expanding universe of noncoding RNAs.
Science. 2002 May 17;296(5571):1260-3
PMID: 12016301
-
Allosteric hammerhead ribozyme TRAPs.
Biochemistry. 2002 May 28;41(21):6588-94
PMID: 12022862
-
Selecting nucleic acids for biosensor applications.
Comb Chem High Throughput Screen. 2002 Jun;5(4):263-70
PMID: 12052178
-
Rationally designed allosteric variants of hammerhead ribozymes responsive to the HIV-1 Tat protein.
Comb Chem High Throughput Screen. 2002 Jun;5(4):301-12
PMID: 12052181
-
A general strategy for effector-mediated control of RNA-cleaving ribozymes and DNA enzymes.
J Mol Biol. 2002 Apr 19;318(1):33-43
PMID: 12054766
-
Protein-dependent ribozymes report molecular interactions in real time.
Nat Biotechnol. 2002 Jul;20(7):717-22
PMID: 12089558
-
RNA interference.
Nature. 2002 Jul 11;418(6894):244-51
PMID: 12110901
-
Monitoring post-translational modification of proteins with allosteric ribozymes.
Nat Biotechnol. 2002 Aug;20(8):810-5
PMID: 12118241
-
Genetic control by a metabolite binding mRNA.
Chem Biol. 2002 Sep;9(9):1043
PMID: 12323379
-
A versatile communication module for controlling RNA folding and catalysis.
Nucleic Acids Res. 2002 Nov 1;30(21):4599-606
PMID: 12409449
-
Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression.
Nature. 2002 Oct 31;419(6910):952-6
PMID: 12410317
-
In vivo-applied functional RNAs as tools in proteomics and genomics research.
Trends Biotechnol. 2002 Nov;20(11):462-6
PMID: 12413820
-
Reporter ribozymes for real-time analysis of domain-specific interactions in biomolecules: HIV-1 reverse transcriptase and the primer-template complex.
Angew Chem Int Ed Engl. 2002 Nov 15;41(22):4263-6
PMID: 12434357
-
Stealth regulation: biological circuits with small RNA switches.
Genes Dev. 2002 Nov 15;16(22):2829-42
PMID: 12435626
-
Alternative tertiary structure attenuates self-cleavage of the ribozyme in the satellite RNA of barley yellow dwarf virus.
Nucleic Acids Res. 1991 Oct 11;19(19):5313-20
PMID: 1717946
-
Real-Time Characterization of Ribozymes by Fluorecence Resonance Energy Transfer (FRET).
Angew Chem Int Ed Engl. 1999 May 3;38(9):1300-1303
PMID: 29711725
-
An Allosteric Ribozyme Regulated by Doxycyline.
Angew Chem Int Ed Engl. 2000 Dec 1;39(23):4369-4373
PMID: 29711918
-
An improved version of the hairpin ribozyme functions as a ribonucleoprotein complex.
Biochemistry. 1995 Jun 13;34(23):7739-48
PMID: 7779820
-
Rational design of allosteric ribozymes.
Chem Biol. 1997 Jun;4(6):453-9
PMID: 9224568
-
An allosteric hammerhead ribozyme.
Biotechnology (N Y). 1995 Feb;13(2):161-4
PMID: 9634757
-
Allosteric regulation of a ribozyme activity through ligand-induced conformational change.
Nucleic Acids Res. 1998 Jul 15;26(14):3379-84
PMID: 9649622
-
Folding intermediates of a self-splicing RNA: mispairing of the catalytic core.
J Mol Biol. 1998 Jul 24;280(4):597-609
PMID: 9677291
-
Mechanism for allosteric inhibition of an ATP-sensitive ribozyme.
Nucleic Acids Res. 1998 Sep 15;26(18):4214-21
PMID: 9722642
-
A novel allosterically trans-activated ribozyme, the maxizyme, with exceptional specificity in vitro and in vivo.
Mol Cell. 1998 Nov;2(5):617-27
PMID: 9844634
-
Coupled changes in translation and transcription during cobalamin-dependent regulation of btuB expression in Escherichia coli.
J Bacteriol. 1998 Dec;180(24):6719-28
PMID: 9852020
-
In vitro selection of an allosteric ribozyme that transduces analytes to amplicons.
Nat Biotechnol. 1999 Jan;17(1):62-6
PMID: 9920271