Home LiteratureArticle Details
PMID: 12368245 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Molecular characterization of a chromosomal rearrangement involved in the adaptive evolution of yeast strains.

Genome research ·Vol. 12 ·No. 10 ·2002-10-00 ·Pages 1533-9

Pérez-Ortín JE, Querol A, Puig S, Barrio E

Abstract

Wine yeast strains show a high level of chromosome length polymorphism. This polymorphism is mainly generated by illegitimate recombination mediated by Ty transposons or subtelomeric repeated sequences. We have found, however, that the SSU1-R allele, which confers sulfite resistance to yeast cells, is the product of a reciprocal translocation between chromosomes VIII and XVI due to unequal crossing-over mediated by microhomology between very short sequences on the 5' upstream regions of the SSU1 and ECM34 genes. We also show that this translocation is only present in wine yeast strains, suggesting that the use for millennia of sulfite as a preservative in wine production could have favored its selection. This is the first time that a gross chromosomal rearrangement is shown to be involved in the adaptive evolution of Saccharomyces cerevisiae.

MeSH Terms
Anion Transport Proteins/genetics Base Sequence/genetics Chromosomes, Fungal/genetics DNA, Fungal/genetics Evolution, Molecular Gene Frequency/genetics Gene Rearrangement/genetics Genes, Fungal/genetics Genetic Markers/genetics Genome, Fungal Molecular Sequence Data Recombination, Genetic/genetics Saccharomyces cerevisiae/genetics Saccharomyces cerevisiae Proteins/genetics Species Specificity Translocation, Genetic/genetics
Chemicals
Anion Transport Proteins DNA, Fungal Genetic Markers Saccharomyces cerevisiae Proteins Ssu1 protein, S cerevisiae
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Pérez-Ortín José E
Departament de Bioquímica i Biologia Molecular, Universitat de València, Spain. jose.e.perez@uv.es
Querol Amparo
Puig Sergi
Barrio Eladio
References (26)
26 references, click to expand
  1. Widespread aneuploidy revealed by DNA microarray expression profiling.
    Nat Genet. 2000 Jul;25(3):333-7 PMID: 10888885
  2. Allelic and ectopic recombination between Ty elements in yeast.
    Genetics. 1988 Jul;119(3):549-59 PMID: 2841187
  3. Determination of the relative ploidy in different Saccharomyces cerevisiae strains used for fermentation and 'flor' film ageing of dry sherry-type wines.
    Yeast. 1997 Feb;13(2):101-17 PMID: 9046092
  4. Analysis of the chromosomal DNA polymorphism of wine strains of Saccharomyces cerevisiae.
    Curr Genet. 1992 Jul;22(1):1-7 PMID: 1611665
  5. On the origins of wine yeast.
    Res Microbiol. 1999 Apr;150(3):199-204 PMID: 10229949
  6. A family of laboratory strains of Saccharomyces cerevisiae carry rearrangements involving chromosomes I and III.
    Yeast. 1998 Apr 30;14(6):551-64 PMID: 9605505
  7. Analysis of the constitution of the beer yeast genome by PCR, sequencing and subtelomeric sequence hybridization.
    Int J Syst Evol Microbiol. 2001 Jul;51(Pt 4):1607-18 PMID: 11491364
  8. Multiple Ty-mediated chromosomal translocations lead to karyotype changes in a wine strain of Saccharomyces cerevisiae.
    Mol Gen Genet. 1999 Jun;261(4-5):841-50 PMID: 10394922
  9. RTM1: a member of a new family of telomeric repeated genes in yeast.
    Genetics. 1995 Jul;140(3):945-56 PMID: 7672593
  10. Fzf1p of Saccharomyces cerevisiae is a positive regulator of SSU1 transcription and its first zinc finger region is required for DNA binding.
    Yeast. 1999 Apr;15(6):473-80 PMID: 10234785
  11. Genealogy of principal strains of the yeast genetic stock center.
    Genetics. 1986 May;113(1):35-43 PMID: 3519363
  12. A natural chimeric yeast containing genetic material from three species.
    Int J Syst Bacteriol. 1999 Oct;49 Pt 4:1933-8 PMID: 10555378
  13. Mitotic recombination and genetic changes in Saccharomyces cerevisiae during wine fermentation.
    Appl Environ Microbiol. 2000 May;66(5):2057-61 PMID: 10788381
  14. Tandemly repeated 147 bp elements cause structural and functional variation in divergent MAL promoters of Saccharomyces cerevisiae.
    Yeast. 1997 Sep 30;13(12):1135-44 PMID: 9301020
  15. The chromosomal constitution of wine strains of Saccharomyces cerevisiae.
    Yeast. 1990 Sep-Oct;6(5):367-82 PMID: 2220073
  16. Use of sulfite resistance in Saccharomyces cerevisiae as a dominant selectable marker.
    Curr Genet. 1999 Dec;36(6):339-44 PMID: 10654087
  17. Comparison of the proteomes of three yeast wild type strains: CEN.PK2, FY1679 and W303.
    Comp Funct Genomics. 2001;2(4):207-25 PMID: 18628919
  18. Factors which affect the frequency of sporulation and tetrad formation in Saccharomyces cerevisiae baker's yeasts.
    Appl Environ Microbiol. 1995 Feb;61(2):630-8 PMID: 7574601
  19. Tailoring wine yeast for the new millennium: novel approaches to the ancient art of winemaking.
    Yeast. 2000 Jun 15;16(8):675-729 PMID: 10861899
  20. Mitotic recombination in yeast: elements controlling its incidence.
    Yeast. 2000 Jun 15;16(8):731-54 PMID: 10861900
  21. Gross chromosomal rearrangements in Saccharomyces cerevisiae replication and recombination defective mutants.
    Nat Genet. 1999 Sep;23(1):81-5 PMID: 10471504
  22. SSU1 mediates sulphite efflux in Saccharomyces cerevisiae.
    Yeast. 2000 Jul;16(10):881-8 PMID: 10870099
  23. Chromosomal rearrangements during vegetative growth of a wild strain of Saccharomyces cerevisiae.
    Appl Environ Microbiol. 1993 Jan;59(1):322-6 PMID: 8439158
  24. Whole genome analysis of a wine yeast strain.
    Comp Funct Genomics. 2001;2(2):69-79 PMID: 18628902
  25. Facts, myths and legends on the prime industrial microorganism.
    J Ind Microbiol. 1995 Jun;14(6):514-22 PMID: 7662293
  26. Evidence for multiple interspecific hybridization in Saccharomyces sensu stricto species.
    FEMS Yeast Res. 2002 Jan;1(4):323-31 PMID: 12702336
Article Info
Journal
Genome research
Abbr.
Genome Res
ISSN
1088-9051
Published
2002-10-00
Pages
1533-9
Language
English
Region
United States
NLM ID
9518021
PMCID
PMC187534
Subset
IM
Databases
GENBANK
AF239757, AF239758, AJ458340, AJ458341, AJ458342, AJ458343, AJ458344, AJ458345, AJ458346, AJ458347, AJ458348, AJ458349, AJ458350, AJ458351, AJ458352, AJ458353, AJ458354, AJ458355, AJ458356, AJ458357, AJ458358, AJ458359, AJ458360, AJ458361, AJ458362, AJ458363, AJ458364, AJ458365, AJ458366, AJ458367
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com