Home LiteratureArticle Details
PMID: 12101235 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Nuclear export of mRNA by TAP/NXF1 requires two nucleoporin-binding sites but not p15.

Molecular and cellular biology ·Vol. 22 ·No. 15 ·2002-08-00 ·Pages 5405-18

Braun IC, Herold A, Rode M, Izaurralde E

Abstract

Metazoan NXF1/p15 heterodimers promote export of bulk mRNA through nuclear pore complexes (NPC). NXF1 interacts with the NPC via two distinct structural domains, the UBA-like domain and the NTF2-like scaffold, which results from the heterodimerization of the NTF2-like domain of NXF1 with p15. Both domains feature a single nucleoporin-binding site, and they act synergistically to promote NPC translocation. Whether the NTF2-like scaffold (and thereby p15) contributes only to NXF1/NPC association or is also required for other functions, e.g., to impart directionality to the export process by regulating NXF1/NPC or NXF1/cargo interactions, remains unresolved. Here we show that a minimum of two nucleoporin-binding sites is required for NXF1-mediated export of cellular mRNA. These binding sites can be provided by an NTF2-like scaffold followed by a UBA-like domain (as in the wild-type protein) or by two NTF2-like scaffolds or two UBA-like domains in tandem. In the latter case, the export activity of NXF1 is independent of p15. Thus, as for the UBA-like domain, the function of the NTF2-like scaffold is confined to nucleoporin binding. More importantly, two copies of either of these domains are sufficient to promote directional transport of mRNA cargoes across the NPC.

MeSH Terms
ATP Binding Cassette Transporter, Subfamily B, Member 2 ATP-Binding Cassette Transporters Active Transport, Cell Nucleus/physiology Animals Binding Sites/physiology Carrier Proteins/metabolism Cell Line Cell Nucleus/metabolism Drosophila Proteins Drosophila melanogaster Humans Mutagenesis, Site-Directed Nuclear Pore Complex Proteins/metabolism Nuclear Proteins/genetics,metabolism Nucleocytoplasmic Transport Proteins Oocytes/cytology,metabolism Protein Binding/physiology Protein Structure, Tertiary/physiology RNA, Messenger/metabolism RNA-Binding Proteins/genetics,metabolism Recombinant Fusion Proteins/genetics,metabolism Sequence Deletion Structure-Activity Relationship Xenopus laevis
Chemicals
ATP Binding Cassette Transporter, Subfamily B, Member 2 ATP-Binding Cassette Transporters Carrier Proteins Drosophila Proteins NXF1 protein, human NXT1 protein, human Nuclear Pore Complex Proteins Nuclear Proteins Nucleocytoplasmic Transport Proteins Nxt1 protein, Drosophila RNA, Messenger RNA-Binding Proteins Recombinant Fusion Proteins TAP1 protein, human
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Braun Isabelle C
European Molecular Biology Laboratory, Meyerhofstrasse 1, D-69117 Heidelberg, Germany.
Herold Andrea
Rode Michaela
Izaurralde Elisa
References (42)
42 references, click to expand
  1. Structural basis for the recognition of a nucleoporin FG repeat by the NTF2-like domain of the TAP/p15 mRNA nuclear export factor.
    Mol Cell. 2001 Sep;8(3):645-56 PMID: 11583626
  2. NXF5, a novel member of the nuclear RNA export factor family, is lost in a male patient with a syndromic form of mental retardation.
    Curr Biol. 2001 Sep 18;11(18):1381-91 PMID: 11566096
  3. Formation of Tap/NXT1 heterodimers activates Tap-dependent nuclear mRNA export by enhancing recruitment to nuclear pore complexes.
    Mol Cell Biol. 2002 Jan;22(1):245-56 PMID: 11739738
  4. NXF1/p15 heterodimers are essential for mRNA nuclear export in Drosophila.
    RNA. 2001 Dec;7(12):1768-80 PMID: 11780633
  5. Small bristles, the Drosophila ortholog of NXF-1, is essential for mRNA export throughout development.
    RNA. 2001 Dec;7(12):1781-92 PMID: 11780634
  6. Complex formation between Tap and p15 affects binding to FG-repeat nucleoporins and nucleocytoplasmic shuttling.
    J Biol Chem. 2002 Mar 15;277(11):9242-6 PMID: 11756420
  7. Structure of the C-terminal FG-nucleoporin binding domain of Tap/NXF1.
    Nat Struct Biol. 2002 Apr;9(4):247-51 PMID: 11875519
  8. Domains of U4 and U6 snRNAs required for snRNP assembly and splicing complementation in Xenopus oocytes.
    EMBO J. 1990 Oct;9(10):3397-404 PMID: 2145149
  9. Minimal Rev-response element for type 1 human immunodeficiency virus.
    J Virol. 1991 Apr;65(4):2131-4 PMID: 2002556
  10. Nuclear export of different classes of RNA is mediated by specific factors.
    J Cell Biol. 1994 Mar;124(5):627-35 PMID: 7509815
  11. Mex67p, a novel factor for nuclear mRNA export, binds to both poly(A)+ RNA and nuclear pores.
    EMBO J. 1997 Jun 2;16(11):3256-71 PMID: 9214641
  12. The simian retrovirus-1 constitutive transport element, unlike the HIV-1 RRE, uses factors required for cellular mRNA export.
    Curr Biol. 1997 Sep 1;7(9):619-28 PMID: 9285715
  13. The constitutive transport element (CTE) of Mason-Pfizer monkey virus (MPMV) accesses a cellular mRNA export pathway.
    EMBO J. 1997 Dec 15;16(24):7500-10 PMID: 9405378
  14. Structural basis for molecular recognition between nuclear transport factor 2 (NTF2) and the GDP-bound form of the Ras-family GTPase Ran.
    J Mol Biol. 1998 Apr 3;277(3):635-46 PMID: 9533885
  15. TAP, the human homolog of Mex67p, mediates CTE-dependent RNA export from the nucleus.
    Mol Cell. 1998 Apr;1(5):649-59 PMID: 9660949
  16. Nucleocytoplasmic transport: the soluble phase.
    Annu Rev Biochem. 1998;67:265-306 PMID: 9759490
  17. TAP binds to the constitutive transport element (CTE) through a novel RNA-binding motif that is sufficient to promote CTE-dependent RNA export from the nucleus.
    EMBO J. 1999 Apr 1;18(7):1953-65 PMID: 10202158
  18. The Mex67p-mediated nuclear mRNA export pathway is conserved from yeast to human.
    EMBO J. 1999 May 4;18(9):2593-609 PMID: 10228171
  19. The human Tap protein is a nuclear mRNA export factor that contains novel RNA-binding and nucleocytoplasmic transport sequences.
    Genes Dev. 1999 May 1;13(9):1126-39 PMID: 10323864
  20. Identification of novel import and export signals of human TAP, the protein that binds to the constitutive transport element of the type D retrovirus mRNAs.
    Mol Cell Biol. 1999 Sep;19(9):6306-17 PMID: 10454577
  21. RanGTP-binding protein NXT1 facilitates nuclear export of different classes of RNA in vitro.
    Mol Cell Biol. 2000 Jul;20(13):4562-71 PMID: 10848583
  22. Interaction between NTF2 and xFxFG-containing nucleoporins is required to mediate nuclear import of RanGDP.
    J Mol Biol. 1999 Oct 29;293(3):579-93 PMID: 10543952
  23. Identification of an NTF2-related factor that binds Ran-GTP and regulates nuclear protein export.
    Mol Cell Biol. 1999 Dec;19(12):8616-24 PMID: 10567585
  24. Splicing is required for rapid and efficient mRNA export in metazoans.
    Proc Natl Acad Sci U S A. 1999 Dec 21;96(26):14937-42 PMID: 10611316
  25. Transport of proteins and RNAs in and out of the nucleus.
    Cell. 1999 Dec 23;99(7):677-90 PMID: 10619422
  26. The C-terminal domain of TAP interacts with the nuclear pore complex and promotes export of specific CTE-bearing RNA substrates.
    RNA. 2000 Jan;6(1):136-58 PMID: 10668806
  27. The nuclear pore complex: a protein machine bridging the nucleus and cytoplasm.
    Curr Opin Cell Biol. 2000 Jun;12(3):361-71 PMID: 10801463
  28. Analysis of cellular factors that mediate nuclear export of RNAs bearing the Mason-Pfizer monkey virus constitutive transport element.
    J Virol. 2000 Jul;74(13):5863-71 PMID: 10846066
  29. Structural basis for the interaction between FxFG nucleoporin repeats and importin-beta in nuclear trafficking.
    Cell. 2000 Jul 7;102(1):99-108 PMID: 10929717
  30. Binding of the Mex67p/Mtr2p heterodimer to FXFG, GLFG, and FG repeat nucleoporins is essential for nuclear mRNA export.
    J Cell Biol. 2000 Aug 21;150(4):695-706 PMID: 10952996
  31. The structure of the mRNA export factor TAP reveals a cis arrangement of a non-canonical RNP domain and an LRR domain.
    EMBO J. 2000 Nov 1;19(21):5587-98 PMID: 11060011
  32. Mex67p of Schizosaccharomyces pombe interacts with Rae1p in mediating mRNA export.
    Mol Cell Biol. 2000 Dec;20(23):8767-82 PMID: 11073978
  33. TAP (NXF1) belongs to a multigene family of putative RNA export factors with a conserved modular architecture.
    Mol Cell Biol. 2000 Dec;20(23):8996-9008 PMID: 11073998
  34. The mRNA export in Caenorhabditis elegans is mediated by Ce-NXF-1, an ortholog of human TAP/NXF and Saccharomyces cerevisiae Mex67p.
    RNA. 2000 Dec;6(12):1762-72 PMID: 11142376
  35. NXT1 is necessary for the terminal step of Crm1-mediated nuclear export.
    J Cell Biol. 2001 Jan 8;152(1):141-55 PMID: 11149927
  36. Kinetic analysis of translocation through nuclear pore complexes.
    EMBO J. 2001 Mar 15;20(6):1320-30 PMID: 11250898
  37. Prediction of structural domains of TAP reveals details of its interaction with p15 and nucleoporins.
    EMBO Rep. 2000 Jul;1(1):53-8 PMID: 11256625
  38. NXT1 (p15) is a crucial cellular cofactor in TAP-dependent export of intron-containing RNA in mammalian cells.
    Mol Cell Biol. 2001 Apr;21(7):2545-54 PMID: 11259602
  39. Nucleocytoplasmic transport enters the atomic age.
    Curr Opin Cell Biol. 2001 Jun;13(3):310-9 PMID: 11343901
  40. Overexpression of TAP/p15 heterodimers bypasses nuclear retention and stimulates nuclear mRNA export.
    J Biol Chem. 2001 Jun 8;276(23):20536-43 PMID: 11259411
  41. Two closely related human nuclear export factors utilize entirely distinct export pathways.
    Mol Cell. 2001 Aug;8(2):397-406 PMID: 11545741
  42. RNA export mediated by tap involves NXT1-dependent interactions with the nuclear pore complex.
    J Biol Chem. 2001 Nov 30;276(48):44953-62 PMID: 11579093
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
2002-08-00
Pages
5405-18
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC133933
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com