Home LiteratureArticle Details
PMID: 11940605 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Sla1p serves as the targeting signal recognition factor for NPFX(1,2)D-mediated endocytosis.

The Journal of cell biology ·Vol. 157 ·No. 2 ·2002-04-15 ·Pages 315-26

Howard JP, Hutton JL, Olson JM, Payne GS

Abstract

Efficient endocytosis requires cytoplasmic domain targeting signals that specify incorporation of cargo into endocytic vesicles. Adaptor proteins play a central role in cargo collection by linking targeting signals to the endocytic machinery. We have characterized NPFX(1,2) (NPFX[1,2]D) targeting signals and identified the actin-associated protein Sla1p as the adaptor for NPFX(1,2)D-mediated endocytosis in Saccharomyces cerevisiae. 11 amino acids encompassing an NPFX(1,2)D sequence were sufficient to direct uptake of a truncated form of the pheromone receptor Ste2p. In this context, endocytic targeting activity was not sustained by conservative substitutions of the phenylalanine or aspartate. An NPFX1,2D-related sequence was identified in native Ste2p that functions redundantly with ubiquitin-based endocytic signals. A two-hybrid interaction screen for NPFX(1,2)D-interacting proteins yielded SLA1, but no genes encoding Eps15 homology (EH) domains, protein modules known to recognize NPF peptides. Furthermore, EH domains did not recognize an NPFX(1,2)D signal when directly tested by two-hybrid analysis. SLA1 disruption severely inhibited NPFX(1,2)D-mediated endocytosis, but only marginally affected ubiquitin-directed uptake. NPFX(1,2)D-dependent internalization required a conserved domain of Sla1p, SLA1 homology domain, which selectively bound an NPFX(1,2)D-containing fusion protein in vitro. Thus, through a novel NPF-binding domain, Sla1p serves as an endocytic targeting signal adaptor, providing a means to couple cargo with clathrin- and actin-based endocytic machineries.

MeSH Terms
Amino Acid Motifs Amino Acid Sequence Binding Sites Carrier Proteins/genetics,metabolism Conserved Sequence Cytoskeletal Proteins Endocytosis Fungal Proteins/genetics,metabolism Gene Deletion Microfilament Proteins Models, Biological Protein Binding Protein Sorting Signals/physiology Protein Structure, Tertiary Recombinant Fusion Proteins/metabolism Saccharomyces cerevisiae/genetics,metabolism Saccharomyces cerevisiae Proteins/chemistry,genetics,metabolism Signal Transduction Structure-Activity Relationship Two-Hybrid System Techniques
Chemicals
Carrier Proteins Cytoskeletal Proteins END3 protein, S cerevisiae Fungal Proteins Microfilament Proteins PAN1 protein, S cerevisiae Protein Sorting Signals Recombinant Fusion Proteins SLA1 protein, S cerevisiae Saccharomyces cerevisiae Proteins
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Howard James P
Department of Biological Chemistry, University of California, Los Angeles, School of Medicine, Los Angeles, CA 90095, USA.
Hutton Jenna L
Olson John M
Payne Gregory S
References (73)
73 references, click to expand
  1. Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase.
    Gene. 1988 Jul 15;67(1):31-40 PMID: 3047011
  2. Identification of a novel sequence mediating regulated endocytosis of the G protein-coupled alpha-pheromone receptor in yeast.
    Mol Biol Cell. 1993 May;4(5):511-21 PMID: 8392878
  3. AP-2/Eps15 interaction is required for receptor-mediated endocytosis.
    J Cell Biol. 1998 Mar 9;140(5):1055-62 PMID: 9490719
  4. Interaction of tyrosine-based sorting signals with clathrin-associated proteins.
    Science. 1995 Sep 29;269(5232):1872-5 PMID: 7569928
  5. Secretory carrier membrane proteins 31-35 define a common protein composition among secretory carrier membranes.
    J Biol Chem. 1991 Oct 5;266(28):18949-57 PMID: 1717458
  6. EH domain proteins Pan1p and End3p are components of a complex that plays a dual role in organization of the cortical actin cytoskeleton and endocytosis in Saccharomyces cerevisiae.
    Mol Cell Biol. 1997 Aug;17(8):4294-304 PMID: 9234686
  7. Role of the ENTH domain in phosphatidylinositol-4,5-bisphosphate binding and endocytosis.
    Science. 2001 Feb 9;291(5506):1047-51 PMID: 11161217
  8. Targeting, disruption, replacement, and allele rescue: integrative DNA transformation in yeast.
    Methods Enzymol. 1991;194:281-301 PMID: 2005793
  9. SOI1 encodes a novel, conserved protein that promotes TGN-endosomal cycling of Kex2p and other membrane proteins by modulating the function of two TGN localization signals.
    J Cell Biol. 1997 Oct 6;139(1):23-36 PMID: 9314526
  10. Mutation of a tyrosine localization signal in the cytosolic tail of yeast Kex2 protease disrupts Golgi retention and results in default transport to the vacuole.
    Mol Biol Cell. 1992 Dec;3(12):1353-71 PMID: 1493334
  11. Bee1, a yeast protein with homology to Wiscott-Aldrich syndrome protein, is critical for the assembly of cortical actin cytoskeleton.
    J Cell Biol. 1997 Feb 10;136(3):649-58 PMID: 9024694
  12. SCAMP 37, a new marker within the general cell surface recycling system.
    EMBO J. 1993 Oct;12(10):3753-61 PMID: 8404846
  13. A protein interaction map for cell polarity development.
    J Cell Biol. 2001 Aug 6;154(3):549-71 PMID: 11489916
  14. A multiubiquitin chain is confined to specific lysine in a targeted short-lived protein.
    Science. 1989 Mar 24;243(4898):1576-83 PMID: 2538923
  15. Adaptors for clathrin-mediated traffic.
    Annu Rev Cell Dev Biol. 1999;15:705-32 PMID: 10611976
  16. Pan1p, End3p, and S1a1p, three yeast proteins required for normal cortical actin cytoskeleton organization, associate with each other and play essential roles in cell wall morphogenesis.
    Mol Cell Biol. 2000 Jan;20(1):12-25 PMID: 10594004
  17. Clathrin facilitates the internalization of seven transmembrane segment receptors for mating pheromones in yeast.
    J Cell Biol. 1993 Dec;123(6 Pt 2):1707-16 PMID: 8276891
  18. Protein sorting by tyrosine-based signals: adapting to the Ys and wherefores.
    Trends Cell Biol. 1997 Mar;7(3):124-8 PMID: 17708922
  19. The carboxy-terminal segment of the yeast alpha-factor receptor is a regulatory domain.
    Cell. 1988 Oct 21;55(2):221-34 PMID: 2844413
  20. The EH-domain-containing protein Pan1 is required for normal organization of the actin cytoskeleton in Saccharomyces cerevisiae.
    Mol Cell Biol. 1996 Sep;16(9):4897-914 PMID: 8756649
  21. Protein regulation by monoubiquitin.
    Nat Rev Mol Cell Biol. 2001 Mar;2(3):195-201 PMID: 11265249
  22. Intersectin, a novel adaptor protein with two Eps15 homology and five Src homology 3 domains.
    J Biol Chem. 1998 Nov 20;273(47):31401-7 PMID: 9813051
  23. The EH and SH3 domain Ese proteins regulate endocytosis by linking to dynamin and Eps15.
    EMBO J. 1999 Mar 1;18(5):1159-71 PMID: 10064583
  24. eps15 and eps15R are essential components of the endocytic pathway.
    Cancer Res. 1997 Dec 15;57(24):5498-504 PMID: 9407958
  25. Ubiquitin lys63 is involved in ubiquitination of a yeast plasma membrane protein.
    EMBO J. 1997 Oct 1;16(19):5847-54 PMID: 9312043
  26. Epsin is an EH-domain-binding protein implicated in clathrin-mediated endocytosis.
    Nature. 1998 Aug 20;394(6695):793-7 PMID: 9723620
  27. Molecular mechanism of NPF recognition by EH domains.
    Nat Struct Biol. 2000 Nov;7(11):1018-22 PMID: 11062555
  28. The "megaprimer" method of site-directed mutagenesis.
    Biotechniques. 1990 Apr;8(4):404-7 PMID: 2340178
  29. A novel all helix fold of the AP180 amino-terminal domain for phosphoinositide binding and clathrin assembly in synaptic vesicle endocytosis.
    Cell. 2001 Feb 9;104(3):433-40 PMID: 11239400
  30. Yeast epsins contain an essential N-terminal ENTH domain, bind clathrin and are required for endocytosis.
    EMBO J. 1999 Aug 16;18(16):4383-93 PMID: 10449404
  31. The Saccharomyces cerevisiae homologue of human Wiskott-Aldrich syndrome protein Las17p interacts with the Arp2/3 complex.
    Mol Biol Cell. 1999 Oct;10(10):3521-38 PMID: 10512884
  32. Immunohistochemical localization of the neural cannabinoid receptor in rat brain.
    J Neurosci Res. 1998 Feb 1;51(3):391-402 PMID: 9486774
  33. A function for monoubiquitination in the internalization of a G protein-coupled receptor.
    Mol Cell. 1998 Jan;1(2):193-202 PMID: 9659916
  34. Activation of the yeast Arp2/3 complex by Bee1p, a WASP-family protein.
    Curr Biol. 1999 May 6;9(9):501-4 PMID: 10322115
  35. Linking cargo to vesicle formation: receptor tail interactions with coat proteins.
    Curr Opin Cell Biol. 1997 Aug;9(4):488-95 PMID: 9261055
  36. A novel fluorescence-activated cell sorter-based screen for yeast endocytosis mutants identifies a yeast homologue of mammalian eps15.
    J Cell Biol. 1996 Dec;135(6 Pt 1):1485-500 PMID: 8978817
  37. A novel EH domain protein of Saccharomyces cerevisiae, Ede1p, involved in endocytosis.
    J Cell Sci. 2000 Sep;113 ( Pt 18):3309-19 PMID: 10954428
  38. The J.D. mutation in familial hypercholesterolemia: amino acid substitution in cytoplasmic domain impedes internalization of LDL receptors.
    Cell. 1986 Apr 11;45(1):15-24 PMID: 3955657
  39. Endocytic protein intersectin-l regulates actin assembly via Cdc42 and N-WASP.
    Nat Cell Biol. 2001 Oct;3(10):927-32 PMID: 11584276
  40. NPXY, a sequence often found in cytoplasmic tails, is required for coated pit-mediated internalization of the low density lipoprotein receptor.
    J Biol Chem. 1990 Feb 25;265(6):3116-23 PMID: 1968060
  41. Synthetic-lethal interactions identify two novel genes, SLA1 and SLA2, that control membrane cytoskeleton assembly in Saccharomyces cerevisiae.
    J Cell Biol. 1993 Aug;122(3):635-44 PMID: 8335689
  42. The sequence NPFXD defines a new class of endocytosis signal in Saccharomyces cerevisiae.
    J Cell Biol. 1996 Dec;135(6 Pt 2):1789-800 PMID: 8991091
  43. Binding specificity and in vivo targets of the EH domain, a novel protein-protein interaction module.
    Genes Dev. 1997 Sep 1;11(17):2239-49 PMID: 9303539
  44. The LDL receptor clustering motif interacts with the clathrin terminal domain in a reverse turn conformation.
    J Cell Biol. 1998 Jul 13;142(1):59-67 PMID: 9660863
  45. Dap160, a neural-specific Eps15 homology and multiple SH3 domain-containing protein that interacts with Drosophila dynamin.
    J Biol Chem. 1998 Jul 24;273(30):19108-19 PMID: 9668096
  46. Cell cycle control of the yeast HO gene: cis- and trans-acting regulators.
    Cell. 1987 Feb 13;48(3):389-97 PMID: 3542227
  47. Sla1p is a functionally modular component of the yeast cortical actin cytoskeleton required for correct localization of both Rho1p-GTPase and Sla2p, a protein with talin homology.
    Mol Biol Cell. 1999 Apr;10(4):1061-75 PMID: 10198057
  48. The tyrosine kinase substrate eps15 is constitutively associated with the plasma membrane adaptor AP-2.
    J Cell Biol. 1995 Dec;131(6 Pt 2):1831-8 PMID: 8557749
  49. Recognition of the polyubiquitin proteolytic signal.
    EMBO J. 2000 Jan 4;19(1):94-102 PMID: 10619848
  50. Recognition specificity of individual EH domains of mammals and yeast.
    EMBO J. 1998 Nov 16;17(22):6541-50 PMID: 9822599
  51. The NPXY internalization signal of the LDL receptor adopts a reverse-turn conformation.
    Cell. 1991 Dec 20;67(6):1195-201 PMID: 1760844
  52. SCAMP1 function in endocytosis.
    J Biol Chem. 2000 Apr 28;275(17):12752-6 PMID: 10777571
  53. Cytoplasmic tail phosphorylation of the alpha-factor receptor is required for its ubiquitination and internalization.
    J Cell Biol. 1998 Apr 20;141(2):349-58 PMID: 9548714
  54. SH3-domain-containing proteins function at distinct steps in clathrin-coated vesicle formation.
    Nat Cell Biol. 1999 Jun;1(2):119-24 PMID: 10559884
  55. Simultaneous binding of PtdIns(4,5)P2 and clathrin by AP180 in the nucleation of clathrin lattices on membranes.
    Science. 2001 Feb 9;291(5506):1051-5 PMID: 11161218
  56. Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast.
    Genetics. 1996 Dec;144(4):1425-36 PMID: 8978031
  57. The END3 gene encodes a protein that is required for the internalization step of endocytosis and for actin cytoskeleton organization in yeast.
    Mol Biol Cell. 1994 Sep;5(9):1023-37 PMID: 7841519
  58. Ubiquitination of a yeast plasma membrane receptor signals its ligand-stimulated endocytosis.
    Cell. 1996 Jan 26;84(2):277-87 PMID: 8565073
  59. A large PEST-like sequence directs the ubiquitination, endocytosis, and vacuolar degradation of the yeast a-factor receptor.
    J Cell Biol. 1998 Aug 24;142(4):949-61 PMID: 9722608
  60. Activation of the Arp2/3 complex by the actin filament binding protein Abp1p.
    J Cell Biol. 2001 Apr 30;153(3):627-34 PMID: 11331312
  61. Protein transport to the vacuole and receptor-mediated endocytosis by clathrin heavy chain-deficient yeast.
    J Cell Biol. 1988 May;106(5):1453-61 PMID: 2836429
  62. High rates of actin filament turnover in budding yeast and roles for actin in establishment and maintenance of cell polarity revealed using the actin inhibitor latrunculin-A.
    J Cell Biol. 1997 Apr 21;137(2):399-416 PMID: 9128251
  63. Improved methodology for analysis and quantitation of proteins on one-dimensional silver-stained slab gels.
    Anal Biochem. 1983 Mar;129(2):277-87 PMID: 6189421
  64. Novel protein kinases Ark1p and Prk1p associate with and regulate the cortical actin cytoskeleton in budding yeast.
    J Cell Biol. 1999 Mar 22;144(6):1203-18 PMID: 10087264
  65. The low density lipoprotein receptor. Identification of amino acids in cytoplasmic domain required for rapid endocytosis.
    J Biol Chem. 1987 Mar 25;262(9):4075-82 PMID: 3104336
  66. Multiple roles for Rsp5p-dependent ubiquitination at the internalization step of endocytosis.
    J Biol Chem. 2001 Jul 13;276(28):25974-81 PMID: 11356856
  67. Regulation of the actin cytoskeleton organization in yeast by a novel serine/threonine kinase Prk1p.
    J Cell Biol. 1999 Jan 11;144(1):71-82 PMID: 9885245
  68. "Western blotting": electrophoretic transfer of proteins from sodium dodecyl sulfate--polyacrylamide gels to unmodified nitrocellulose and radiographic detection with antibody and radioiodinated protein A.
    Anal Biochem. 1981 Apr;112(2):195-203 PMID: 6266278
  69. Fluorescence microscopy methods for yeast.
    Methods Cell Biol. 1989;31:357-435 PMID: 2476649
  70. High-efficiency transformation of plasmid DNA into yeast.
    Methods Mol Biol. 2001;177:85-97 PMID: 11530617
  71. The C-terminus of the S. cerevisiae alpha-pheromone receptor mediates an adaptive response to pheromone.
    Cell. 1988 Aug 26;54(5):609-20 PMID: 2842059
  72. Pan1p, yeast eps15, functions as a multivalent adaptor that coordinates protein-protein interactions essential for endocytosis.
    J Cell Biol. 1998 Apr 6;141(1):71-84 PMID: 9531549
  73. Yeast Eps15-like endocytic protein, Pan1p, activates the Arp2/3 complex.
    Nat Cell Biol. 2001 Jul;3(7):687-90 PMID: 11433303
Article Info
Journal
The Journal of cell biology
Abbr.
J Cell Biol
ISSN
0021-9525
Published
2002-04-15
Epub
2002-00-08
Pages
315-26
Language
English
Region
United States
NLM ID
0375356
PMCID
PMC2199253
Subset
IM
Grants
NIGMS NIH HHS · R01 GM039040 · United States
NIGMS NIH HHS · GM39040 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com