Home LiteratureArticle Details
PMID: 11560889 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Multiple interactions among the components of the recombinational DNA repair system in Schizosaccharomyces pombe.

Genetics ·Vol. 159 ·No. 1 ·2001-09-00 ·Pages 91-105

Tsutsui Y, Khasanov FK, Shinagawa H, Iwasaki H, Bashkirov VI

Abstract

Schizosaccharomyces pombe Rhp55 and Rhp57 are RecA-like proteins involved in double-strand break (DSB) repair. Here we demonstrate that Rhp55 and Rhp57 proteins strongly interact in vivo, similar to Saccharomyces cerevisiae Rad55p and Rad57p. Mutations in the conserved ATP-binding/hydrolysis folds of both the Rhp55 and Rhp57 proteins impaired their function in DNA repair but not in cell proliferation. However, when combined, ATPase fold mutations in Rhp55p and Rhp57p resulted in severe defects of both functions, characteristic of the deletion mutants. Yeast two-hybrid analysis also revealed other multiple in vivo interactions among S. pombe proteins involved in recombinational DNA repair. Similar to S. cerevisiae Rad51p-Rad54p, S. pombe Rhp51p and Rhp54p were found to interact. Both putative Rad52 homologs in S. pombe, Rad22p and Rti1p, were found to interact with the C-terminal region of Rhp51 protein. Moreover, Rad22p and Rti1p exhibited mutual, as well as self-, interactions. In contrast to the S. cerevisiae interacting pair Rad51p-Rad55p, S. pombe Rhp51 protein strongly interacted with Rhp57 but not with Rhp55 protein. In addition, the Rti1 and Rad22 proteins were found to form a complex with the large subunit of S. pombe RPA. Our data provide compelling evidence that most, but not all, of the protein-protein interactions found in S. cerevisiae DSB repair are evolutionarily conserved.

MeSH Terms
Adenosine Triphosphatases/genetics,metabolism Adenosine Triphosphate/metabolism Alleles Animals Chromosomes/metabolism DNA/metabolism DNA Helicases/metabolism DNA Repair DNA-Binding Proteins/genetics,metabolism Dimerization Evolution, Molecular Fungal Proteins/metabolism Gene Deletion Hydrolysis Methyl Methanesulfonate Mice Models, Biological Mutagens Mutation Plasmids/metabolism Precipitin Tests Protein Binding Protein Folding Protein Structure, Tertiary Rabbits Rad51 Recombinase Recombination, Genetic Schizosaccharomyces/genetics Schizosaccharomyces pombe Proteins Two-Hybrid System Techniques
Chemicals
DNA-Binding Proteins Fungal Proteins Mutagens RHP51 protein, S pombe RHP55 protein, S pombe Schizosaccharomyces pombe Proteins Adenosine Triphosphate DNA Methyl Methanesulfonate Rad51 Recombinase Adenosine Triphosphatases Rhp57 protein, S pombe DNA Helicases Rhp54 protein, S pombe
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Tsutsui Y
Research Institute for Microbial Diseases, Osaka University, Osaka 565-0871, Japan.
Khasanov F K
Shinagawa H
Iwasaki H
Bashkirov V I
References (60)
60 references, click to expand
  1. A general method applicable to the search for similarities in the amino acid sequence of two proteins.
    J Mol Biol. 1970 Mar;48(3):443-53 PMID: 5420325
  2. Transcriptional activation by the SV40 AP-1 recognition element in yeast is mediated by a factor similar to AP-1 that is distinct from GCN4.
    Cell. 1988 Apr 22;53(2):321-30 PMID: 2834068
  3. Mutation of lysine-48 to arginine in the yeast RAD3 protein abolishes its ATPase and DNA helicase activities but not the ability to bind ATP.
    EMBO J. 1988 Oct;7(10):3263-9 PMID: 2846277
  4. Immunofluorescence methods for yeast.
    Methods Enzymol. 1991;194:565-602 PMID: 2005809
  5. Characterization of double-strand break-induced recombination: homology requirements and single-stranded DNA formation.
    Mol Cell Biol. 1992 Feb;12(2):563-75 PMID: 1732731
  6. Rad51 protein involved in repair and recombination in S. cerevisiae is a RecA-like protein.
    Cell. 1992 May 1;69(3):457-70 PMID: 1581961
  7. Similarity of the yeast RAD51 filament to the bacterial RecA filament.
    Science. 1993 Mar 26;259(5103):1896-9 PMID: 8456314
  8. DNA double-strand breaks and the RAD50-RAD57 genes in Saccharomyces.
    Semin Cancer Biol. 1993 Apr;4(2):73-83 PMID: 8513150
  9. Cloning of human, mouse and fission yeast recombination genes homologous to RAD51 and recA.
    Nat Genet. 1993 Jul;4(3):239-43 PMID: 8358431
  10. Cloning the RAD51 homologue of Schizosaccharomyces pombe.
    Nucleic Acids Res. 1993 Sep 25;21(19):4586-91 PMID: 8233794
  11. Cdi1, a human G1 and S phase protein phosphatase that associates with Cdk2.
    Cell. 1993 Nov 19;75(4):791-803 PMID: 8242750
  12. The fission yeast rad22 gene, having a function in mating-type switching and repair of DNA damages, encodes a protein homolog to Rad52 of Saccharomyces cerevisiae.
    Nucleic Acids Res. 1993 Dec 25;21(25):5940-4 PMID: 8290356
  13. The search for the right partner: homologous pairing and DNA strand exchange proteins in eukaryotes.
    Experientia. 1994 Mar 15;50(3):223-33 PMID: 8143796
  14. Catalysis of ATP-dependent homologous DNA pairing and strand exchange by yeast RAD51 protein.
    Science. 1994 Aug 26;265(5176):1241-3 PMID: 8066464
  15. Homotypic and heterotypic protein associations control Rad51 function in double-strand break repair.
    Genes Dev. 1994 Nov 1;8(21):2552-62 PMID: 7958917
  16. Cloning and characterisation of the Schizosaccharomyces pombe rad32 gene: a gene required for repair of double strand breaks and recombination.
    Nucleic Acids Res. 1995 Feb 11;23(3):383-8 PMID: 7885834
  17. Complex formation in yeast double-strand break repair: participation of Rad51, Rad52, Rad55, and Rad57 proteins.
    Proc Natl Acad Sci U S A. 1995 Jul 18;92(15):6925-9 PMID: 7624345
  18. DNA strand exchange mediated by a RAD51-ssDNA nucleoprotein filament with polarity opposite to that of RecA.
    Cell. 1995 Aug 11;82(3):453-61 PMID: 7634335
  19. Functional differences and interactions among the putative RecA homologs Rad51, Rad55, and Rad57.
    Mol Cell Biol. 1995 Sep;15(9):4843-50 PMID: 7651402
  20. Homologous recombination and the roles of double-strand breaks.
    Trends Biochem Sci. 1995 Oct;20(10):387-91 PMID: 8533149
  21. Physical interaction between human RAD52 and RPA is required for homologous recombination in mammalian cells.
    J Biol Chem. 1996 Aug 2;271(31):18996-9000 PMID: 8702565
  22. A Rad52 homolog is required for RAD51-independent mitotic recombination in Saccharomyces cerevisiae.
    Genes Dev. 1996 Aug 15;10(16):2025-37 PMID: 8769646
  23. Isolation of the Schizosaccharomyces pombe RAD54 homologue, rhp54+, a gene involved in the repair of radiation damage and replication fidelity.
    J Cell Sci. 1996 Jan;109 ( Pt 1):73-81 PMID: 8834792
  24. The yeast HRS1 gene encodes a polyglutamine-rich nuclear protein required for spontaneous and hpr1-induced deletions between direct repeats.
    Genetics. 1996 Mar;142(3):705-16 PMID: 8849881
  25. DNA strand annealing is promoted by the yeast Rad52 protein.
    Proc Natl Acad Sci U S A. 1996 Oct 1;93(20):10729-34 PMID: 8855248
  26. Yeast Rad51 recombinase mediates polar DNA strand exchange in the absence of ATP hydrolysis.
    J Biol Chem. 1996 Nov 8;271(45):27983-6 PMID: 8910403
  27. Direct association between the yeast Rad51 and Rad54 recombination proteins.
    J Biol Chem. 1996 Dec 27;271(52):33181-6 PMID: 8969173
  28. DNA double-strand breaks caused by replication arrest.
    EMBO J. 1997 Jan 15;16(2):430-8 PMID: 9029161
  29. The Schizosaccharomyces pombe rad11+ gene encodes the large subunit of replication protein A.
    Mol Cell Biol. 1997 May;17(5):2381-90 PMID: 9111307
  30. Recombinational repair in yeast: functional interactions between Rad51 and Rad54 proteins.
    EMBO J. 1997 May 1;16(9):2535-44 PMID: 9171366
  31. General purpose tagging vectors for fission yeast.
    Gene. 1997 Jun 3;191(2):191-5 PMID: 9218719
  32. Interaction of human recombination proteins Rad51 and Rad54.
    Nucleic Acids Res. 1997 Oct 15;25(20):4106-10 PMID: 9321665
  33. Stimulation by Rad52 of yeast Rad51-mediated recombination.
    Nature. 1998 Jan 22;391(6665):404-7 PMID: 9450759
  34. Rad52 protein stimulates DNA strand exchange by Rad51 and replication protein A.
    Nature. 1998 Jan 22;391(6665):407-10 PMID: 9450760
  35. Rad52 forms ring structures and co-operates with RPA in single-strand DNA annealing.
    Genes Cells. 1998 Mar;3(3):145-56 PMID: 9619627
  36. Studies of the interaction between Rad52 protein and the yeast single-stranded DNA binding protein RPA.
    Mol Cell Biol. 1998 Jul;18(7):4400-6 PMID: 9632824
  37. Targeted inactivation of mouse RAD52 reduces homologous recombination but not resistance to ionizing radiation.
    Mol Cell Biol. 1998 Nov;18(11):6423-9 PMID: 9774658
  38. Homologous recombination, but not DNA repair, is reduced in vertebrate cells deficient in RAD52.
    Mol Cell Biol. 1998 Nov;18(11):6430-5 PMID: 9774659
  39. The many interfaces of Mre11.
    Cell. 1998 Nov 25;95(5):583-6 PMID: 9845359
  40. Mouse Rad54 affects DNA conformation and DNA-damage-induced Rad51 foci formation.
    Curr Biol. 1999 Mar 25;9(6):325-8 PMID: 10209103
  41. The contribution of homologous recombination in preserving genome integrity in mammalian cells.
    Biochimie. 1999 Jan-Feb;81(1-2):87-105 PMID: 10214914
  42. Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae.
    Microbiol Mol Biol Rev. 1999 Jun;63(2):349-404 PMID: 10357855
  43. Sister chromatid exchanges are mediated by homologous recombination in vertebrate cells.
    Mol Cell Biol. 1999 Jul;19(7):5166-9 PMID: 10373565
  44. The N-terminal domain of the human Rad51 protein binds DNA: structure and a DNA binding surface as revealed by NMR.
    J Mol Biol. 1999 Jul 9;290(2):495-504 PMID: 10390347
  45. A new recombinational DNA repair gene from Schizosaccharomyces pombe with homology to Escherichia coli RecA.
    Genetics. 1999 Aug;152(4):1557-72 PMID: 10430583
  46. Human Rad51 amino acid residues required for Rad52 binding.
    J Mol Biol. 1999 Aug 20;291(3):537-48 PMID: 10448035
  47. Yeast Rad54 promotes Rad51-dependent homologous DNA pairing via ATP hydrolysis-driven change in DNA double helix conformation.
    J Biol Chem. 1999 Oct 8;274(41):29453-62 PMID: 10506208
  48. A novel allele of RAD52 that causes severe DNA repair and recombination deficiencies only in the absence of RAD51 or RAD59.
    Genetics. 1999 Nov;153(3):1117-30 PMID: 10545446
  49. Single strand DNA binding and annealing activities in the yeast recombination factor Rad59.
    J Biol Chem. 1999 Nov 26;274(48):33839-42 PMID: 10567339
  50. Evidence for simultaneous protein interactions between human Rad51 paralogs.
    J Biol Chem. 2000 Jun 2;275(22):16443-9 PMID: 10749867
  51. DNA length dependence of the single-strand annealing pathway and the role of Saccharomyces cerevisiae RAD59 in double-strand break repair.
    Mol Cell Biol. 2000 Jul;20(14):5300-9 PMID: 10866686
  52. Structural biology of Rad50 ATPase: ATP-driven conformational control in DNA double-strand break repair and the ABC-ATPase superfamily.
    Cell. 2000 Jun 23;101(7):789-800 PMID: 10892749
  53. Repair of UV damage in the fission yeast Schizosaccharomyces pombe.
    Mutat Res. 2000 Jun 30;451(1-2):197-210 PMID: 10915873
  54. Genetic analysis of homologous DNA recombination in vertebrate somatic cells.
    Int J Biochem Cell Biol. 2000 Aug;32(8):817-31 PMID: 10940640
  55. A novel human rad54 homologue, Rad54B, associates with Rad51.
    J Biol Chem. 2000 Aug 25;275(34):26316-21 PMID: 10851248
  56. Superhelicity-driven homologous DNA pairing by yeast recombination factors Rad51 and Rad54.
    Mol Cell. 2000 Sep;6(3):563-72 PMID: 11030336
  57. Rad54 protein is targeted to pairing loci by the Rad51 nucleoprotein filament.
    Mol Cell. 2000 Sep;6(3):583-92 PMID: 11030338
  58. Molecular dissection of interactions between Rad51 and members of the recombination-repair group.
    Mol Cell Biol. 2001 Feb;21(3):966-76 PMID: 11154282
  59. Characterization of RAD52 homologs in the fission yeast Schizosaccharomyces pombe.
    Mutat Res. 2001 Jan 5;461(4):311-23 PMID: 11104907
  60. Chromosome instability and defective recombinational repair in knockout mutants of the five Rad51 paralogs.
    Mol Cell Biol. 2001 Apr;21(8):2858-66 PMID: 11283264
Article Info
Journal
Genetics
Abbr.
Genetics
ISSN
0016-6731
Published
2001-09-00
Pages
91-105
Language
English
Region
United States
NLM ID
0374636
PMCID
PMC1461803
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com