Home LiteratureArticle Details
PMID: 11539446 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Alternative bases in the RNA world: the prebiotic synthesis of urazole and its ribosides.

Journal of molecular evolution ·Vol. 38 ·1994-00-00 ·Pages 549-57

Kolb VM, Dworkin JP, Miller SL

Abstract

Urazole is a five-membered heterocyclic compound which is isosteric with uracil's hydrogen-bonding segment. Urazole reacts spontaneoulsy with ribose (and other aldoses) to give a mixture of four ribosides: alpha and beta pyranosides and furanosides. This reaction occurs in aqueous solution at mild temperatures. Thermodynamic and kinetic parameters for the reaction of urazole with ribose were determined. In contrast, uracil is completely unreactive with ribose under these conditions. Urazole's unusual reactivity is ascribed to the hydrazine portion of the molecule. Urazole can be synthesized from biuret and hydrazine under prebiotic conditions. The prebiotic synthesis of guanazole, which is isosteric in part to diaminopyrimidine and cytosine, is accomplished from dicyandiamide and hydrazine. Kinetic parameters for both prebiotic reactions were measured. Urazole and guanazole are transparent in the UV, which would be a favorable property in the absence of an ozone layer on the early Earth. Urazole makes hydrogen bonds with adenine in DMSO similar to those of uracil, as established by H NMR. All of these properties make urazole an attractive potential precursor to uracil and guanazole a potential precursor to cytosine in the RNA or pre-RNA world.

Keywords
NASA Discipline Exobiology Non-NASA Center
MeSH Terms
Cytosine/chemistry Evolution, Chemical Evolution, Molecular Guanazole/chemical synthesis,chemistry Hydrazines/chemistry Magnetic Resonance Spectroscopy Nucleosides/chemical synthesis RNA/chemistry Ribose/chemistry Uracil/chemistry
Chemicals
Hydrazines Nucleosides Uracil RNA Ribose Cytosine Guanazole
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Kolb V M
Department of Chemistry, University of California, San Diego, La Jolla 92093-0317, USA.
Dworkin J P
Miller S L
Investigators
1 investigators, click to expand
Miller S L
U CA San Diego, La Jolla
References (12)
12 references, click to expand
  1. The chemical synthesis of the 1,2,4-triazole nucleosides related to uridine,2'-deoxyuridine, thymidine, and cytidine.
    J Org Chem. 1970 Aug;35(8):2635-41 PMID: 5449224
  2. Uridine phosphorylase, molecular properties and mechanism of catalysis.
    Biochemistry. 1974 May 7;13(10):2051-6 PMID: 4826883
  3. Uridine and deoxyuridine phosphorylases from Ehrlich ascites tumor.
    Biochim Biophys Acta. 1961 Jul 22;51:138-47 PMID: 13737038
  4. The case for an ancestral genetic system involving simple analogues of the nucleotides.
    Proc Natl Acad Sci U S A. 1987 Jul;84(13):4398-402 PMID: 2440020
  5. Prebiotic ribose synthesis: a critical analysis.
    Orig Life Evol Biosph. 1988;18(1-2):71-85 PMID: 2453009
  6. Nonenzymatic template-directed synthesis of informational macromolecules.
    Cold Spring Harb Symp Quant Biol. 1987;52:41-51 PMID: 2456883
  7. Studies in prebiotic synthesis. VI. Synthesis of purine nucleosides.
    J Mol Biol. 1972 Jun 14;67(1):25-33 PMID: 4339529
  8. The standard Gibbs free energy change of hydrolysis of alpha-D-ribose 1-phosphate.
    Arch Biochem Biophys. 1980 Nov;205(1):191-7 PMID: 6778396
  9. Enzymatic incorporation of a new base pair into DNA and RNA extends the genetic alphabet.
    Nature. 1990 Jan 4;343(6253):33-7 PMID: 1688644
  10. Carbon-13 magnetic resonance. 18. Selected nucleosides.
    J Phys Chem. 1970 Jun 25;74(13):2684-9 PMID: 5419076
  11. Studies in prebiotic synthesis: VII. Solid-state synthesis of purine nucleosides.
    J Mol Evol. 1972;1(3):249-57 PMID: 4681226
  12. NMR evidence of specific base-pairing between purines and pyrimidines.
    Biochem Biophys Res Commun. 1966 Apr 19;23(2):194-201 PMID: 5928912
Article Info
Journal
Journal of molecular evolution
Abbr.
J Mol Evol
ISSN
0022-2844
Published
1994-00-00
Pages
549-57
Language
English
Region
Germany
NLM ID
0360051
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com