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PMID: 2453009 Published · ppublish English Journal Article

Prebiotic ribose synthesis: a critical analysis.

Shapiro R

Abstract

The discovery of catalytic ability in RNA has given fresh impetus to speculations that RNA played a critical role in the origin of life. This question must rest on the plausibility of prebiotic oligonucleotide synthesis, rather than on the properties of the final product. Many claims have been published to support the idea that the components of RNA were readily available on the prebiotic earth. In this article, the literature cited in support of the prebiotic availability of one subunit, D-ribose, is reviewed to determine whether it justifies the claim. Polymerization of formaldehyde (the formose reaction) has been the single reaction cited for prebiotic ribose synthesis. It has been conducted with different catalysts: numerous basic substances, neutral clays and heat, and various types of radiation. Ribose has been identified (yields are uncertain, but unlikely to be greater than 1%) in reactions run with concentrated (0.15 M or greater) formaldehyde. It has been claimed in reactions run at lower concentration, but characterization has been inadequate, and experimental details have not been provided. The complex sugar mixture produced in the formose reaction is rapidly destroyed under the reaction conditions. Nitrogenous substances (needed for prebiotic base synthesis) would interfere with the formose reaction by reacting with formaldehyde, the intermediates, and sugar products in undesirable ways. The evidence that is currently available does not support the availability of ribose on the prebiotic earth, except perhaps for brief periods of time, in low concentration as part of a complex mixture, and under conditions unsuitable for nucleoside synthesis.

MeSH Terms
Catalysis Chemical Phenomena Chemistry Origin of Life RNA Ribose Time Factors
Chemicals
RNA Ribose
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
Shapiro R
Department of Chemistry, New York University, New York 10003.
References (33)
33 references, click to expand
  1. On the origin of RNA splicing and introns.
    Cell. 1985 Sep;42(2):397-400 PMID: 2411416
  2. The photochemistry of biogenic gases in the early and present atmosphere.
    Orig Life Evol Biosph. 1985;15:299-318 PMID: 11539611
  3. Alanine synthesis from glyceraldehyde and ammonium ion in aqueous solution.
    J Mol Evol. 1985;21:351-5 PMID: 11542005
  4. Speculations on the early course of evolution.
    Proc Natl Acad Sci U S A. 1986 Mar;83(5):1271-5 PMID: 2419905
  5. Biological catalysis by RNA.
    Annu Rev Biochem. 1986;55:599-629 PMID: 2427016
  6. Catalysis by RNA.
    Bioessays. 1986 Feb;4(2):56-61 PMID: 2431683
  7. Thermodynamic equilibrium and the inorganic origin of organic compounds.
    Science. 1966 Aug 5;153(3736):628-33 PMID: 17757236
  8. RNA catalysis and the origins of life.
    J Theor Biol. 1986 Nov 21;123(2):127-49 PMID: 2442564
  9. A model for the RNA-catalyzed replication of RNA.
    Proc Natl Acad Sci U S A. 1986 Jun;83(12):4360-3 PMID: 2424025
  10. Reactions of formaldehyde with guanosine.
    Toxicol Lett. 1981 Oct;9(2):161-4 PMID: 7302989
  11. The reactions of OH radicals with D-ribose in deoxygenated and oxygenated qqueous solution.
    Carbohydr Res. 1977 Sep;58(1):21-30 PMID: 912679
  12. How many chemicals are there?
    Science. 1983 Apr 15;220(4594):293 PMID: 17732911
  13. Chiral selection in poly(C)-directed synthesis of oligo(G).
    Nature. 1984 Aug 16-22;310(5978):602-4 PMID: 6462250
  14. Model for origin of monosaccharides.
    Nature. 1967 Nov 4;216(5114):453-5 PMID: 6057246
  15. The Tetrahymena intervening sequence ribonucleic acid enzyme is a phosphotransferase and an acid phosphatase.
    Biochemistry. 1986 Aug 12;25(16):4478-82 PMID: 2429688
  16. Prebiotic adenine synthesis via HCN oligomerization in ice.
    Biosystems. 1982;15(3):191-3 PMID: 6291673
  17. A study of the interaction of glycine and its oligohomopeptides with formaldehyde and acetaldehyde under possible primitive earth conditions.
    Orig Life. 1983 Dec;13(2):97-108 PMID: 6669377
  18. The photochemistry of the paleoatmosphere.
    J Mol Evol. 1982;18(3):161-72 PMID: 7097775
  19. Synthesis in sugars in potentially prebiotic conditions.
    Nature. 1967 Nov 4;216(5114):455 PMID: 6057247
  20. Association of polyhydroxy compounds with cations in solution.
    Biochem Biophys Res Commun. 1962 Jan 24;6:418-21 PMID: 14474190
  21. Reaction of human serum albumin with aldoses.
    Carbohydr Res. 1985 Dec 15;145(1):113-22 PMID: 4092214
  22. An investigation of the equilibria between aqueous ribose, ribulose, and arabinose.
    Biophys Chem. 1985 Aug;22(3):197-204 PMID: 3931718
  23. Isolation and identification of cross-links from formaldehyde-treated nucleic acids.
    Biochemistry. 1980 Nov 25;19(24):5525-31 PMID: 7459328
  24. Chemical evolution and the origin of life.
    Sci Am. 1978 Sep;239(3):70-86 PMID: 705325
  25. Stages of emerging life--five principles of early organization.
    J Mol Evol. 1982;19(1):47-61 PMID: 7161810
  26. Synthesis of purines under possible primitive earth conditions. II. Purine intermediates from hydrogen cyanide.
    Arch Biochem Biophys. 1962 Feb;96:293-313 PMID: 14482339
  27. Chemical evolution. XXVI. Photochemistry of methane, nitrogen, and water mixture as a model for the atmosphere of the primitive earth.
    J Am Chem Soc. 1975 May 28;97(11):2962-7 PMID: 1133344
  28. HCN: a plausible source of purines, pyrimidines and amino acids on the primitive earth.
    J Mol Evol. 1978 Oct 6;11(4):293-311 PMID: 31491
  29. Genesis of amino acids in the primeval sea. Formation of amino acids from sugars and ammonia in a modified sea medium.
    J Biochem. 1980 Jan;87(1):359-62 PMID: 7358640
  30. RNA catalysis and the origin of life.
    Orig Life Evol Biosph. 1985;16(2):97-116 PMID: 2423941
  31. Chemical effects of large impacts on the Earth's primitive atmosphere.
    Nature. 1986 Jan 23;319:305-8 PMID: 11540884
  32. The chemistry of ribose.
    Adv Carbohydr Chem. 1951;6:135-74 PMID: 14894350
  33. Effects of high CO2 levels on surface temperature and atmospheric oxidation state of the early Earth.
    J Atmos Chem. 1984;1:403-28 PMID: 11541984
Article Info
Journal
Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life
Abbr.
Orig Life Evol Biosph
ISSN
0169-6149
Published
1988-00-00
Pages
71-85
Language
English
Region
Netherlands
NLM ID
8610391
Subset
IM
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