Home LiteratureArticle Details
PMID: 10662773 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Apg9p/Cvt7p is an integral membrane protein required for transport vesicle formation in the Cvt and autophagy pathways.

The Journal of cell biology ·Vol. 148 ·No. 3 ·2000-02-07 ·Pages 465-80

Noda T, Kim J, Huang WP, Baba M, Tokunaga C, Ohsumi Y, Klionsky DJ

Abstract

In nutrient-rich, vegetative conditions, the yeast Saccharomyces cerevisiae transports a resident protease, aminopeptidase I (API), to the vacuole by the cytoplasm to vacuole targeting (Cvt) pathway, thus contributing to the degradative capacity of this organelle. When cells subsequently encounter starvation conditions, the machinery that recruited precursor API (prAPI) also sequesters bulk cytosol for delivery, breakdown, and recycling in the vacuole by the autophagy pathway. Each of these overlapping alternative transport pathways is specifically mobilized depending on environmental cues. The basic mechanism of cargo packaging and delivery involves the formation of a double-membrane transport vesicle around prAPI and/or bulk cytosol. Upon completion, these Cvt and autophagic vesicles are targeted to the vacuole to allow delivery of their lumenal contents. Key questions remain regarding the origin and formation of the transport vesicle. In this study, we have cloned the APG9/CVT7 gene and characterized the gene product. Apg9p/Cvt7p is the first characterized integral membrane protein required for Cvt and autophagy transport. Biochemical and morphological analyses indicate that Apg9p/Cvt7p is localized to large perivacuolar punctate structures, but does not colocalize with typical endomembrane marker proteins. Finally, we have isolated a temperature conditional allele of APG9/CVT7 and demonstrate the direct role of Apg9p/Cvt7p in the formation of the Cvt and autophagic vesicles. From these results, we propose that Apg9p/Cvt7p may serve as a marker for a specialized compartment essential for these vesicle-mediated alternative targeting pathways.

MeSH Terms
Animals Autophagy/physiology Biological Transport Centrifugation, Density Gradient Fungal Proteins/genetics,metabolism Membrane Proteins/genetics,metabolism Rabbits Saccharomyces cerevisiae/genetics,metabolism,physiology Subcellular Fractions Vacuoles/metabolism
Chemicals
Fungal Proteins Membrane Proteins
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Noda T
Department of Cell Biology, National Institute for Basic Biology, Okazaki 444-8585, Japan.
Kim J
Huang W P
Baba M
Tokunaga C
Ohsumi Y
Klionsky D J
References (59)
59 references, click to expand
  1. Formation process of autophagosome is traced with Apg8/Aut7p in yeast.
    J Cell Biol. 1999 Oct 18;147(2):435-46 PMID: 10525546
  2. Transport of a large oligomeric protein by the cytoplasm to vacuole protein targeting pathway.
    J Cell Biol. 1997 May 5;137(3):609-18 PMID: 9151668
  3. Cytoplasm-to-vacuole targeting and autophagy employ the same machinery to deliver proteins to the yeast vacuole.
    Proc Natl Acad Sci U S A. 1996 Oct 29;93(22):12304-8 PMID: 8901576
  4. A multispecificity syntaxin homologue, Vam3p, essential for autophagic and biosynthetic protein transport to the vacuole.
    J Cell Biol. 1997 Aug 11;138(3):517-29 PMID: 9245783
  5. The transcriptional program of sporulation in budding yeast.
    Science. 1998 Oct 23;282(5389):699-705 PMID: 9784122
  6. Analysis of the membrane structures involved in autophagy in yeast by freeze-replica method.
    Cell Struct Funct. 1995 Dec;20(6):465-71 PMID: 8825067
  7. Apg7p/Cvt2p: A novel protein-activating enzyme essential for autophagy.
    Mol Biol Cell. 1999 May;10(5):1367-79 PMID: 10233150
  8. Exploring the metabolic and genetic control of gene expression on a genomic scale.
    Science. 1997 Oct 24;278(5338):680-6 PMID: 9381177
  9. Apg1p, a novel protein kinase required for the autophagic process in Saccharomyces cerevisiae.
    Gene. 1997 Jun 19;192(2):245-50 PMID: 9224897
  10. Autophagic proteolysis: control and specificity.
    Histochem J. 1997 May;29(5):365-85 PMID: 9184851
  11. Isolation and characterization of autophagy-defective mutants of Saccharomyces cerevisiae.
    FEBS Lett. 1993 Oct 25;333(1-2):169-74 PMID: 8224160
  12. Acidification of vacuoles is required for autophagic degradation in the yeast, Saccharomyces cerevisiae.
    J Biochem. 1997 Feb;121(2):338-44 PMID: 9089409
  13. Protein sorting in Saccharomyces cerevisiae: isolation of mutants defective in the delivery and processing of multiple vacuolar hydrolases.
    Mol Cell Biol. 1988 Nov;8(11):4936-48 PMID: 3062374
  14. Apg7p/Cvt2p is required for the cytoplasm-to-vacuole targeting, macroautophagy, and peroxisome degradation pathways.
    Mol Biol Cell. 1999 May;10(5):1337-51 PMID: 10233148
  15. Two distinct pathways for targeting proteins from the cytoplasm to the vacuole/lysosome.
    J Cell Biol. 1997 Dec 29;139(7):1687-95 PMID: 9412464
  16. Structural aspects of autophagy.
    Adv Exp Med Biol. 1996;389:103-11 PMID: 8860999
  17. Ultrastructural analysis of the autophagic process in yeast: detection of autophagosomes and their characterization.
    J Cell Biol. 1994 Mar;124(6):903-13 PMID: 8132712
  18. The itinerary of a vesicle component, Aut7p/Cvt5p, terminates in the yeast vacuole via the autophagy/Cvt pathways.
    J Biol Chem. 2000 Feb 25;275(8):5845-51 PMID: 10681575
  19. Isolation and characterization of yeast mutants in the cytoplasm to vacuole protein targeting pathway.
    J Cell Biol. 1995 Nov;131(3):591-602 PMID: 7593182
  20. The syntaxin Tlg1p mediates trafficking of chitin synthase III to polarized growth sites in yeast.
    Mol Biol Cell. 1998 Dec;9(12):3383-97 PMID: 9843576
  21. Tor, a phosphatidylinositol kinase homologue, controls autophagy in yeast.
    J Biol Chem. 1998 Feb 13;273(7):3963-6 PMID: 9461583
  22. A Saccharomyces cerevisiae genomic plasmid bank based on a centromere-containing shuttle vector.
    Gene. 1987;60(2-3):237-43 PMID: 3327750
  23. A simple method for displaying the hydropathic character of a protein.
    J Mol Biol. 1982 May 5;157(1):105-32 PMID: 7108955
  24. The Saccharomyces cerevisiae v-SNARE Vti1p is required for multiple membrane transport pathways to the vacuole.
    Mol Biol Cell. 1999 Jun;10(6):1719-32 PMID: 10359592
  25. Endosomal transport function in yeast requires a novel AAA-type ATPase, Vps4p.
    EMBO J. 1997 Apr 15;16(8):1820-31 PMID: 9155008
  26. Autophagy.
    Subcell Biochem. 1996;27:93-135 PMID: 8993159
  27. A new vital stain for visualizing vacuolar membrane dynamics and endocytosis in yeast.
    J Cell Biol. 1995 Mar;128(5):779-92 PMID: 7533169
  28. In exocrine pancreas, the basolateral endocytic pathway converges with the autophagic pathway immediately after the early endosome.
    J Cell Biol. 1990 Aug;111(2):329-45 PMID: 2166050
  29. A protein conjugation system essential for autophagy.
    Nature. 1998 Sep 24;395(6700):395-8 PMID: 9759731
  30. Vacuolar import of proteins and organelles from the cytoplasm.
    Annu Rev Cell Dev Biol. 1999;15:1-32 PMID: 10611955
  31. Mechanism of autophagy in permeabilized hepatocytes: evidence for regulation by GTP binding proteins.
    Adv Exp Med Biol. 1996;389:113-9 PMID: 8861000
  32. Formation of autophagosomes during degradation of excess peroxisomes induced by di-(2-ethylhexyl)phthalate treatment. II. Immunocytochemical analysis of early and late autophagosomes.
    Eur J Cell Biol. 1993 Dec;62(2):372-83 PMID: 7925493
  33. Isolation of autophagocytosis mutants of Saccharomyces cerevisiae.
    FEBS Lett. 1994 Aug 1;349(2):275-80 PMID: 8050581
  34. Genetic and phenotypic overlap between autophagy and the cytoplasm to vacuole protein targeting pathway.
    J Biol Chem. 1996 Jul 26;271(30):17621-4 PMID: 8663607
  35. Novel system for monitoring autophagy in the yeast Saccharomyces cerevisiae.
    Biochem Biophys Res Commun. 1995 May 5;210(1):126-32 PMID: 7741731
  36. Apg10p, a novel protein-conjugating enzyme essential for autophagy in yeast.
    EMBO J. 1999 Oct 1;18(19):5234-41 PMID: 10508157
  37. Purification and characterization of autophagosomes from rat hepatocytes.
    Biochem J. 1998 Oct 15;335 ( Pt 2):217-24 PMID: 9761717
  38. Peroxisome degradation by microautophagy in Pichia pastoris: identification of specific steps and morphological intermediates.
    J Cell Biol. 1998 May 4;141(3):625-36 PMID: 9566964
  39. The autophagic and endocytic pathways converge at the nascent autophagic vacuoles.
    J Cell Biol. 1997 Jan 13;136(1):61-70 PMID: 9008703
  40. Intracellular sorting and processing of a yeast vacuolar hydrolase: proteinase A propeptide contains vacuolar targeting information.
    Mol Cell Biol. 1988 May;8(5):2105-16 PMID: 3290649
  41. Apg5p functions in the sequestration step in the cytoplasm-to-vacuole targeting and macroautophagy pathways.
    Mol Biol Cell. 2000 Mar;11(3):969-82 PMID: 10712513
  42. Identification of tubulin from the yeast Saccharomyces cerevisiae.
    Proc Natl Acad Sci U S A. 1978 Oct;75(10):4962-6 PMID: 368805
  43. Glucose-induced autophagy of peroxisomes in Pichia pastoris requires a unique E1-like protein.
    Mol Biol Cell. 1999 May;10(5):1353-66 PMID: 10233149
  44. Aminopeptidase I is targeted to the vacuole by a nonclassical vesicular mechanism.
    J Cell Biol. 1997 Jul 14;138(1):37-44 PMID: 9214379
  45. Apg16p is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagy pathway.
    EMBO J. 1999 Jul 15;18(14):3888-96 PMID: 10406794
  46. Autophagy in yeast demonstrated with proteinase-deficient mutants and conditions for its induction.
    J Cell Biol. 1992 Oct;119(2):301-11 PMID: 1400575
  47. The VPS4 gene is involved in protein transport out of a yeast pre-vacuolar endosome-like compartment.
    Curr Genet. 1997 Jun;31(6):469-80 PMID: 9211789
  48. Two syntaxin homologues in the TGN/endosomal system of yeast.
    EMBO J. 1998 Jan 2;17(1):113-26 PMID: 9427746
  49. Vam7p, a SNAP-25-like molecule, and Vam3p, a syntaxin homolog, function together in yeast vacuolar protein trafficking.
    Mol Cell Biol. 1998 Sep;18(9):5308-19 PMID: 9710615
  50. In vitro reconstitution of cytoplasm to vacuole protein targeting in yeast.
    J Cell Biol. 1995 Dec;131(6 Pt 2):1727-35 PMID: 8557740
  51. Aut2p and Aut7p, two novel microtubule-associated proteins are essential for delivery of autophagic vesicles to the vacuole.
    EMBO J. 1998 Jul 1;17(13):3597-607 PMID: 9649430
  52. Apg14p and Apg6/Vps30p form a protein complex essential for autophagy in the yeast, Saccharomyces cerevisiae.
    J Biol Chem. 1998 Aug 28;273(35):22284-91 PMID: 9712845
  53. Divergent modes of autophagy in the methylotrophic yeast Pichia pastoris.
    J Cell Sci. 1995 Jan;108 ( Pt 1):25-35 PMID: 7738102
  54. Mutational analysis of Csc1/Vps4p: involvement of endosome in regulation of autophagy in yeast.
    Cell Struct Funct. 1997 Oct;22(5):501-9 PMID: 9431454
  55. The Vps4p AAA ATPase regulates membrane association of a Vps protein complex required for normal endosome function.
    EMBO J. 1998 Jun 1;17(11):2982-93 PMID: 9606181
  56. Studies on the mechanisms of autophagy: formation of the autophagic vacuole.
    J Cell Biol. 1990 Jun;110(6):1923-33 PMID: 2351689
  57. Novel syntaxin homologue, Pep12p, required for the sorting of lumenal hydrolases to the lysosome-like vacuole in yeast.
    Mol Biol Cell. 1996 Apr;7(4):579-94 PMID: 8730101
  58. Aminopeptidase I of Saccharomyces cerevisiae is localized to the vacuole independent of the secretory pathway.
    J Cell Biol. 1992 Oct;119(2):287-99 PMID: 1400574
  59. A rapid method for localized mutagenesis of yeast genes.
    Yeast. 1992 Feb;8(2):79-82 PMID: 1561838
Article Info
Journal
The Journal of cell biology
Abbr.
J Cell Biol
ISSN
0021-9525
Published
2000-02-07
Pages
465-80
Language
English
Region
United States
NLM ID
0375356
PMCID
PMC2174799
Subset
IM
Grants
NIGMS NIH HHS · GM53396 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com