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PMID: 10482526 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

The Caulobacter crescentus CgtA protein displays unusual guanine nucleotide binding and exchange properties.

Journal of bacteriology ·Vol. 181 ·No. 18 ·1999-09-00 ·Pages 5825-32

Lin B, Covalle KL, Maddock JR

Abstract

The Caulobacter crescentus CgtA protein is a member of the Obg-GTP1 subfamily of monomeric GTP-binding proteins. In vitro, CgtA specifically bound GTP and GDP but not GMP or ATP. CgtA bound GTP and GDP with moderate affinity at 30 degrees C and displayed equilibrium binding constants of 1.2 and 0.5 microM, respectively, in the presence of Mg(2+). In the absence of Mg(2+), the affinity of CgtA for GTP and GDP was reduced 59- and 6-fold, respectively. N-Methyl-3'-O-anthranoyl (mant)-guanine nucleotide analogs were used to quantify GDP and GTP exchange. Spontaneous dissociation of both GDP and GTP in the presence of 5 to 12 mM Mg(2+) was extremely rapid (k(d) = 1.4 and 1.5 s(-1), respectively), 10(3)- to 10(5)-fold faster than that of the well-characterized eukaryotic Ras-like GTP-binding proteins. The dissociation rate constant of GDP increased sevenfold in the absence of Mg(2+). Finally, there was a low inherent GTPase activity with a single-turnover rate constant of 5.0 x 10(-4) s(-1) corresponding to a half-life of hydrolysis of 23 min. These data clearly demonstrate that the guanine nucleotide binding and exchange properties of CgtA are different from those of the well-characterized Ras-like GTP-binding proteins. Furthermore, these data are consistent with a model whereby the nucleotide occupancy of CgtA is controlled by the intracellular levels of guanine nucleotides.

MeSH Terms
Bacterial Proteins Caulobacter crescentus/metabolism Cloning, Molecular GTP-Binding Proteins/chemistry,isolation & purification,metabolism Guanosine Diphosphate/metabolism Guanosine Triphosphate/metabolism Kinetics Magnesium/pharmacology Monomeric GTP-Binding Proteins Polymerase Chain Reaction/methods Recombinant Proteins/chemistry,isolation & purification,metabolism
Chemicals
Bacterial Proteins Recombinant Proteins Guanosine Diphosphate Guanosine Triphosphate CgtA protein, bacteria GTP-Binding Proteins Monomeric GTP-Binding Proteins Magnesium
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Lin B
Department of Biology, University of Michigan, Ann Arbor, Michigan 48109-1048, USA.
Covalle K L
Maddock J R
References (61)
61 references, click to expand
  1. Association of a novel GTP binding protein, DRG, with TAL oncogenic proteins.
    Oncogene. 1996 Jun 6;12(11):2343-50 PMID: 8649774
  2. Interaction of the nuclear GTP-binding protein Ran with its regulatory proteins RCC1 and RanGAP1.
    Biochemistry. 1995 Jan 17;34(2):639-47 PMID: 7819259
  3. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.
    Anal Biochem. 1976 May 7;72:248-54 PMID: 942051
  4. New ribose-modified fluorescent analogs of adenine and guanine nucleotides available as substrates for various enzymes.
    Biochim Biophys Acta. 1983 Feb 15;742(3):496-508 PMID: 6132622
  5. The effect of Mg2+ on the guanine nucleotide exchange rate of p21N-ras.
    J Biol Chem. 1986 Aug 25;261(24):10963-5 PMID: 3525557
  6. A GTP-binding protein of Escherichia coli has homology to yeast RAS proteins.
    Proc Natl Acad Sci U S A. 1986 Dec;83(23):8849-53 PMID: 3097637
  7. A cytoplasmic protein stimulates normal N-ras p21 GTPase, but does not affect oncogenic mutants.
    Science. 1987 Oct 23;238(4826):542-5 PMID: 2821624
  8. Three-dimensional structure of an oncogene protein: catalytic domain of human c-H-ras p21.
    Science. 1988 Feb 19;239(4842):888-93 PMID: 2448879
  9. Purification of ras GTPase activating protein from bovine brain.
    Proc Natl Acad Sci U S A. 1988 Jul;85(14):5026-30 PMID: 3293047
  10. Guanine nucleotide binding properties of purified v-Ki-ras p21 protein produced in Escherichia coli.
    Oncogene Res. 1988 May;2(4):325-33 PMID: 3135524
  11. The Bacillus subtilis spo0B stage 0 sporulation operon encodes an essential GTP-binding protein.
    J Bacteriol. 1989 Mar;171(3):1362-71 PMID: 2537815
  12. Kinetic analysis of the binding of guanine nucleotide to bovine brain smg p25A.
    Biochem Biophys Res Commun. 1989 Jul 14;162(1):273-81 PMID: 2502110
  13. Biochemical properties of the YPT-related rab1B protein. Comparison with rab1A.
    FEBS Lett. 1989 Oct 9;256(1-2):79-84 PMID: 2509243
  14. Hydrolysis of GTP by p21NRAS, the NRAS protooncogene product, is accompanied by a conformational change in the wild-type protein: use of a single fluorescent probe at the catalytic site.
    Proc Natl Acad Sci U S A. 1990 May;87(9):3562-5 PMID: 2185475
  15. The GTP binding motif: variations on a theme.
    FASEB J. 1996 Oct;10(12):1347-68 PMID: 8903506
  16. Molecular cloning and characterization of the obg gene of Streptomyces griseus in relation to the onset of morphological differentiation.
    J Bacteriol. 1997 Jan;179(1):170-9 PMID: 8981995
  17. The role of the metal ion in the p21ras catalysed GTP-hydrolysis: Mn2+ versus Mg2+.
    J Mol Biol. 1997 Mar 7;266(4):847-56 PMID: 9102473
  18. G protein mechanisms: insights from structural analysis.
    Annu Rev Biochem. 1997;66:639-78 PMID: 9242920
  19. The signal recognition particle receptor of Escherichia coli (FtsY) has a nucleotide exchange factor built into the GTPase domain.
    Proc Natl Acad Sci U S A. 1997 Oct 14;94(21):11339-44 PMID: 9326611
  20. Identification of an essential Caulobacter crescentus gene encoding a member of the Obg family of GTP-binding proteins.
    J Bacteriol. 1997 Oct;179(20):6426-31 PMID: 9335292
  21. Guanine-nucleotide binding and hydrolyzing kinetics of ORrab2, a rice small GTP-binding protein expressed in Escherichia coli.
    Eur J Biochem. 1997 Oct 1;249(1):293-300 PMID: 9363782
  22. Cell cycle arrest in Era GTPase mutants: a potential growth rate-regulated checkpoint in Escherichia coli.
    Mol Microbiol. 1998 Feb;27(4):739-50 PMID: 9515700
  23. GEF-mediated GDP/GTP exchange by monomeric GTPases: a regulatory role for Mg2+?
    Bioessays. 1998 Jun;20(6):516-21 PMID: 9699463
  24. An essential GTP-binding protein functions as a regulator for differentiation in Streptomyces coelicolor.
    Mol Microbiol. 1998 Oct;30(1):107-19 PMID: 9786189
  25. Interaction of guanine nucleotides with the signal recognition particle from Escherichia coli.
    Biochemistry. 1998 Nov 3;37(44):15408-13 PMID: 9799502
  26. Time-resolved X-ray crystallographic study of the conformational change in Ha-Ras p21 protein on GTP hydrolysis.
    Nature. 1990 May 24;345(6273):309-15 PMID: 2111463
  27. Refined crystal structure of the triphosphate conformation of H-ras p21 at 1.35 A resolution: implications for the mechanism of GTP hydrolysis.
    EMBO J. 1990 Aug;9(8):2351-9 PMID: 2196171
  28. Inhibition of GTPase activating protein stimulation of Ras-p21 GTPase by the Krev-1 gene product.
    Science. 1990 Jul 13;249(4965):169-71 PMID: 2164710
  29. Kinetics of interaction of nucleotides with nucleotide-free H-ras p21.
    Biochemistry. 1990 Jun 26;29(25):6058-65 PMID: 2200519
  30. Properties of the exchange rate of guanine nucleotides to the novel rap-2B protein.
    Biochem Biophys Res Commun. 1990 Aug 31;171(1):319-24 PMID: 2118346
  31. The GTPase superfamily: conserved structure and molecular mechanism.
    Nature. 1991 Jan 10;349(6305):117-27 PMID: 1898771
  32. An ultrafiltration assay for nucleotide binding to ribonucleotide reductase.
    Anal Biochem. 1990 Aug 15;189(1):138-41 PMID: 2278383
  33. Crystal structures at 2.2 A resolution of the catalytic domains of normal ras protein and an oncogenic mutant complexed with GDP.
    J Mol Biol. 1991 Feb 5;217(3):503-16 PMID: 1899707
  34. The product of the rap2 gene, member of the ras superfamily. Biochemical characterization and site-directed mutagenesis.
    J Biol Chem. 1991 Mar 5;266(7):4315-21 PMID: 1900290
  35. The ras superfamily of small GTP-binding proteins.
    Trends Biochem Sci. 1990 Dec;15(12):469-72 PMID: 2127644
  36. Is there a rate-limiting step before GTP cleavage by H-ras p21?
    Biochemistry. 1991 Nov 19;30(46):11181-5 PMID: 1932038
  37. Effects of ions on the intrinsic activities of c-H-ras protein p21. A comparison with elongation factor Tu.
    Eur J Biochem. 1992 Feb 15;204(1):179-85 PMID: 1740128
  38. Interactions of the ras-like protein p25rab3A with Mg2+ and guanine nucleotides.
    Biochem J. 1992 Mar 1;282 ( Pt 2):387-92 PMID: 1312327
  39. Rac1, a low-molecular-mass GTP-binding-protein with high intrinsic GTPase activity and distinct biochemical properties.
    Eur J Biochem. 1992 Jun 1;206(2):537-46 PMID: 1597193
  40. A mouse CDC25-like product enhances the formation of the active GTP complex of human ras p21 and Saccharomyces cerevisiae RAS2 proteins.
    J Biol Chem. 1992 Dec 5;267(34):24181-3 PMID: 1447167
  41. DRG: a novel developmentally regulated GTP-binding protein.
    Biochem Biophys Res Commun. 1992 Nov 30;189(1):363-70 PMID: 1449490
  42. Kinetic and structural analysis of the Mg(2+)-binding site of the guanine nucleotide-binding protein p21H-ras.
    J Biol Chem. 1993 Jan 15;268(2):923-9 PMID: 8419371
  43. Sequence of the Schizosaccharomyces pombe gtp1 gene and identification of a novel family of putative GTP-binding proteins.
    Gene. 1993 Mar 30;125(2):191-3 PMID: 8462872
  44. The nucleotide exchange rates of rho and rac small GTP-binding proteins are enhanced to different extents by their regulatory protein Smg GDS.
    Biochem Biophys Res Commun. 1993 Aug 16;194(3):1188-93 PMID: 8352776
  45. Proteins regulating Ras and its relatives.
    Nature. 1993 Dec 16;366(6456):643-54 PMID: 8259209
  46. The gene upstream of DmRP128 codes for a novel GTP-binding protein of Drosophila melanogaster.
    Mol Gen Genet. 1994 Feb;242(4):391-8 PMID: 8121394
  47. Fluorescent guanine nucleotide analogs and G protein activation.
    J Biol Chem. 1994 May 13;269(19):13771-8 PMID: 8188654
  48. Molecular cloning and characterization of yeast rho GDP dissociation inhibitor.
    J Biol Chem. 1994 Aug 5;269(31):19713-8 PMID: 8051050
  49. A novel GTP-binding protein which is selectively repressed in SV40 transformed fibroblasts.
    J Biol Chem. 1994 Oct 14;269(41):25447-53 PMID: 7929244
  50. Effects on Bacillus subtilis of a conditional lethal mutation in the essential GTP-binding protein Obg.
    J Bacteriol. 1994 Dec;176(23):7155-60 PMID: 7961486
  51. Biochemical characterization of the essential GTP-binding protein Obg of Bacillus subtilis.
    J Bacteriol. 1994 Dec;176(23):7161-8 PMID: 7961487
  52. Characterization of Rad, a new member of Ras/GTPase superfamily, and its regulation by a unique GTPase-activating protein (GAP)-like activity.
    J Biol Chem. 1995 Mar 3;270(9):4805-12 PMID: 7876254
  53. Possible role for the essential GTP-binding protein Obg in regulating the initiation of sporulation in Bacillus subtilis.
    J Bacteriol. 1995 Jun;177(11):3308-11 PMID: 7768831
  54. Analysis of intrinsic and CDC25-stimulated guanine nucleotide exchange of p21ras-nucleotide complexes by fluorescence measurements.
    Methods Enzymol. 1995;255:95-109 PMID: 8524141
  55. X-ray crystal structure analysis of the catalytic domain of the oncogene product p21H-ras complexed with caged GTP and mant dGppNHp.
    J Mol Biol. 1995 Oct 13;253(1):132-50 PMID: 7473708
  56. Measurement of intrinsic nucleotide exchange and GTP hydrolysis rates.
    Methods Enzymol. 1995;256:67-76 PMID: 7476456
  57. Influence of Mg2+ on the structure and function of Rab5.
    J Biol Chem. 1996 Jan 19;271(3):1322-8 PMID: 8576119
  58. Investigation of the GTP-binding/GTPase cycle of Cdc42Hs using extrinsic reporter group fluorescence.
    Biochemistry. 1996 Apr 9;35(14):4602-8 PMID: 8605211
  59. Partial G protein activation by fluorescent guanine nucleotide analogs. Evidence for a triphosphate-bound but inactive state.
    J Biol Chem. 1996 Mar 1;271(9):4791-7 PMID: 8617747
  60. Characterization of DRGs, developmentally regulated GTP-binding proteins, from pea and Arabidopsis.
    Plant Mol Biol. 1999 Jan;39(1):75-82 PMID: 10080710
  61. Kinetics of interaction of Rab5 and Rab7 with nucleotides and magnesium ions.
    J Biol Chem. 1996 Aug 23;271(34):20470-8 PMID: 8702787
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1999-09-00
Pages
5825-32
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC94105
Subset
IM
Grants
NIGMS NIH HHS · R01 GM055133 · United States
NIGMS NIH HHS · GM-55133 · United States
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