Home LiteratureArticle Details
PMID: 10359674 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Regulation of photoreceptor phosphodiesterase catalysis by its non-catalytic cGMP-binding sites.

The Biochemical journal ·Vol. 340 ( Pt 3) ·1999-06-15 ·Pages 863-9

D'Amours MR, Cote RH

Abstract

The photoreceptor 3':5'-cyclic nucleotide phosphodiesterase (PDE) is the central enzyme of visual excitation in rod photoreceptors. The hydrolytic activity of PDE is precisely regulated by its inhibitory gamma subunit (Pgamma), which binds directly to the catalytic site. We examined the inhibition of frog rod outer segment PDE by endogenous Pgamma, as well as by synthetic peptides corresponding to its central and C-terminal domains, to determine whether the non-catalytic cGMP-binding sites on the catalytic alphabeta dimer of PDE allosterically regulate PDE activity. We found that the apparent binding affinity of Pgamma for PDE was 28 pM when cGMP occupied the non-catalytic sites, whereas Pgamma had an apparent affinity only 1/16 of this when the sites were empty. The elevated basal activity of PDE with empty non-catalytic sites can be decreased by the addition of nanomolar levels of cGMP, demonstrating that the high-affinity non-catalytic sites on the PDE catalytic dimer mediate this effect. No evidence for a direct allosteric effect of the non-catalytic sites on catalysis could be detected for the activated enzyme lacking bound Pgamma. The intrinsic affinity of a synthetic C-terminal (residues 63-87) Pgamma peptide to bind and to inhibit the hydrolytic activity of activated PDE was enhanced 300-fold in the presence of cGMP compared with cAMP. We conclude that the binding of cGMP to the non-catalytic sites of PDE induces an allosteric change in the structure of the catalytic domain that greatly enhances the interaction of the C-terminus of Pgamma with the catalytic domain.

MeSH Terms
3',5'-Cyclic-AMP Phosphodiesterases/antagonists & inhibitors,metabolism Allosteric Regulation Allosteric Site Animals Binding, Competitive Catalytic Domain Cyclic AMP/metabolism Cyclic GMP/metabolism Dimerization Enzyme Activation/drug effects Holoenzymes/metabolism Hydrolysis/drug effects Kinetics Models, Chemical Peptides/chemical synthesis,pharmacology Phosphodiesterase Inhibitors/pharmacology Rana catesbeiana Rod Cell Outer Segment/cytology,enzymology Trypsin/pharmacology
Chemicals
Holoenzymes Peptides Phosphodiesterase Inhibitors Cyclic AMP 3',5'-Cyclic-AMP Phosphodiesterases Trypsin Cyclic GMP
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
D'Amours M R
Department of Biochemistry and Molecular Biology, University of New Hampshire, Durham, NH 03824-3544, USA.
Cote R H
References (40)
40 references, click to expand
  1. Characterization and analysis of frog photoreceptor membranes.
    J Gen Physiol. 1971 Sep;58(3):225-37 PMID: 4255372
  2. Probing domain functions of chimeric PDE6alpha'/PDE5 cGMP-phosphodiesterase.
    J Biol Chem. 1998 Sep 18;273(38):24485-90 PMID: 9733741
  3. Purification and properties of the light-activated cyclic nucleotide phosphodiesterase of rod outer segments.
    J Biol Chem. 1975 Aug 25;250(16):6320-7 PMID: 169236
  4. Cyclic GMP-specific, high affinity, noncatalytic binding sites on light-activated phosphodiesterase.
    J Biol Chem. 1980 Dec 10;255(23):11619-24 PMID: 6254976
  5. Purification and characterization of a cyclic GMP-stimulated cyclic nucleotide phosphodiesterase from bovine tissues.
    J Biol Chem. 1982 Feb 25;257(4):1973-9 PMID: 6276403
  6. Reciprocal effects of an inhibitory factor on catalytic activity and noncatalytic cGMP binding sites of rod phosphodiesterase.
    Proc Natl Acad Sci U S A. 1982 Jun;79(12):3702-6 PMID: 6285360
  7. Purification and characterization of the gamma regulatory subunit of the cyclic GMP phosphodiesterase from retinal rod outer segments.
    J Biol Chem. 1982 Sep 25;257(18):11094-9 PMID: 6286681
  8. Magnitude of increase in retinal cGMP metabolic flux determined by 18O incorporation into nucleotide alpha-phosphoryls corresponds with intensity of photic stimulation.
    J Biol Chem. 1983 Aug 10;258(15):9213-9 PMID: 6307996
  9. Modulation of retinal transducin and phosphodiesterase activities by synthetic peptides of the phosphodiesterase gamma-subunit.
    FEBS Lett. 1987 Oct 5;222(2):266-70 PMID: 2820805
  10. Reciprocal control of retinal rod cyclic GMP phosphodiesterase by its gamma subunit and transducin.
    Proteins. 1986 Sep;1(1):90-9 PMID: 2835761
  11. Active sites of the cyclic GMP phosphodiesterase gamma-subunit of retinal rod outer segments.
    FEBS Lett. 1988 Jul 18;234(2):287-90 PMID: 2455657
  12. Assay of cyclic nucleotide phosphodiesterase using radiolabeled and fluorescent substrates.
    Methods Enzymol. 1988;159:457-70 PMID: 2842611
  13. cGMP is tightly bound to bovine retinal rod phosphodiesterase.
    Proc Natl Acad Sci U S A. 1989 Jun;86(11):4311-5 PMID: 2542968
  14. Expression in bacteria of functional inhibitory subunit of retinal rod cGMP phosphodiesterase.
    Proc Natl Acad Sci U S A. 1989 Jul;86(13):4922-6 PMID: 2544882
  15. Control of light-sensitive current in salamander rods.
    J Physiol. 1988 Sep;403:439-71 PMID: 2473195
  16. The effect of the gamma-subunit of the cyclic GMP phosphodiesterase of bovine and frog (Rana catesbiana) retinal rod outer segments on the kinetic parameters of the enzyme.
    Biochem J. 1990 Feb 1;265(3):655-8 PMID: 2154965
  17. Interactions between the subunits of transducin and cyclic GMP phosphodiesterase in Rana catesbiana rod photoreceptors.
    J Biol Chem. 1990 Jul 15;265(20):11539-48 PMID: 2164007
  18. Beta-subunit of bovine rod photoreceptor cGMP phosphodiesterase. Comparison with the phosphodiesterase family.
    J Biol Chem. 1990 Aug 5;265(22):12955-9 PMID: 2165490
  19. Binding of the gamma-subunit of retinal rod-outer-segment phosphodiesterase with both transducin and the catalytic subunits of phosphodiesterase.
    Biochem J. 1990 Nov 1;271(3):721-7 PMID: 2173904
  20. Activation and solubilization of the retinal cGMP-specific phosphodiesterase by limited proteolysis. Role of the C-terminal domain of the beta-subunit.
    Eur J Biochem. 1991 Jul 15;199(2):263-9 PMID: 1649045
  21. Domain mapping of the retinal cyclic GMP phosphodiesterase gamma-subunit. Function of the domains encoded by the three exons of the gamma-subunit gene.
    Biochem J. 1992 Feb 1;281 ( Pt 3):637-43 PMID: 1311170
  22. Two-site high-affinity interaction between inhibitory and catalytic subunits of rod cyclic GMP phosphodiesterase.
    Biochem J. 1992 Apr 1;283 ( Pt 1):273-9 PMID: 1314566
  23. Noncatalytic cGMP-binding sites of amphibian rod cGMP phosphodiesterase control interaction with its inhibitory gamma-subunits. A putative regulatory mechanism of the rod photoresponse.
    J Biol Chem. 1992 Dec 5;267(34):24501-7 PMID: 1332960
  24. Amplification and kinetics of the activation steps in phototransduction.
    Biochim Biophys Acta. 1993 Mar 1;1141(2-3):111-49 PMID: 8382952
  25. Interactions of a G-protein with its effector: transducin and cGMP phosphodiesterase in retinal rods.
    Cell Signal. 1993 May;5(3):235-41 PMID: 7688544
  26. Intracellular cGMP concentration in rod photoreceptors is regulated by binding to high and moderate affinity cGMP binding sites.
    J Biol Chem. 1993 Aug 15;268(23):17190-8 PMID: 8394335
  27. Phosphorylation of an inhibitory subunit of cGMP phosphodiesterase in Rana catesbeiana rod photoreceptors. II. A possible mechanism for the turnoff of cGMP phosphodiesterase without GTP hydrolysis.
    J Biol Chem. 1994 May 27;269(21):15016-23 PMID: 8195138
  28. cGMP binding sites on photoreceptor phosphodiesterase: role in feedback regulation of visual transduction.
    Proc Natl Acad Sci U S A. 1994 May 24;91(11):4845-9 PMID: 8197145
  29. Rod outer segment structure influences the apparent kinetic parameters of cyclic GMP phosphodiesterase.
    J Gen Physiol. 1994 Jun;103(6):1071-98 PMID: 7931138
  30. The carboxyl terminus of the gamma-subunit of rod cGMP phosphodiesterase contains distinct sites of interaction with the enzyme catalytic subunits and the alpha-subunit of transducin.
    J Biol Chem. 1995 Jun 2;270(22):13210-5 PMID: 7768919
  31. Mechanism of photoreceptor cGMP phosphodiesterase inhibition by its gamma-subunits.
    Proc Natl Acad Sci U S A. 1996 May 28;93(11):5407-12 PMID: 8643588
  32. An interface of interaction between photoreceptor cGMP phosphodiesterase catalytic subunits and inhibitory gamma subunits.
    J Biol Chem. 1996 Aug 16;271(33):19964-9 PMID: 8702712
  33. Molecular origin of continuous dark noise in rod photoreceptors.
    Biophys J. 1996 Nov;71(5):2553-72 PMID: 8913594
  34. Possible stimulation of retinal rod recovery to dark state by cGMP release from a cGMP phosphodiesterase noncatalytic site.
    J Biol Chem. 1996 Dec 20;271(51):32495-8 PMID: 8955069
  35. Structure and function of proteins in G-protein-coupled signal transfer.
    Biochim Biophys Acta. 1996 Oct 29;1286(3):285-322 PMID: 8982287
  36. The gamma subunit of rod cGMP-phosphodiesterase blocks the enzyme catalytic site.
    J Biol Chem. 1997 May 2;272(18):11686-9 PMID: 9115217
  37. Binding of cGMP to both allosteric sites of cGMP-binding cGMP-specific phosphodiesterase (PDE5) is required for its phosphorylation.
    Biochem J. 1998 Feb 1;329 ( Pt 3):505-10 PMID: 9445376
  38. Structural features of the noncatalytic cGMP binding sites of frog photoreceptor phosphodiesterase using cGMP analogs.
    J Biol Chem. 1998 Mar 6;273(10):5557-65 PMID: 9488681
  39. Photoreceptor phosphodiesterase: interaction of inhibitory gamma subunit and cyclic GMP with specific binding sites on catalytic subunits.
    Methods. 1998 Jan;14(1):93-104 PMID: 9500861
  40. Relationship between the inhibition constant (K1) and the concentration of inhibitor which causes 50 per cent inhibition (I50) of an enzymatic reaction.
    Biochem Pharmacol. 1973 Dec 1;22(23):3099-108 PMID: 4202581
Article Info
Journal
The Biochemical journal
Abbr.
Biochem J
ISSN
0264-6021
Published
1999-06-15
Pages
863-9
Language
English
Region
England
NLM ID
2984726R
PMCID
PMC1220321
Subset
IM
Grants
NEI NIH HHS · R01 EY005798 · United States
NEI NIH HHS · EY-05798 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com