XBP1 (X-box binding protein 1)

symbol:
XBP1
locus group:
protein-coding gene
location:
22q12.1
gene_family:
Basic leucine zipper proteins
alias symbol:
None
alias name:
None
entrez id:
7494
ensembl gene id:
ENSG00000100219
ucsc gene id:
uc062cvg.1
refseq accession:
NM_005080
hgnc_id:
HGNC:12801
approved reserved:
1992-02-13
22q12.1
基因染色体位置图

XBP1(X-box binding protein 1)是一种关键的转录因子,属于碱性亮氨酸拉链(bZIP)转录因子家族,主要参与未折叠蛋白反应(UPR, unfolded protein response)和内质网应激(ER stress)的调控。该基因有两种剪接形式:XBP1u(未剪接的非活性形式)和XBP1s(剪接后的活性形式)。当细胞遭遇内质网应激时,IRE1α酶会剪接XBP1u的mRNA,产生XBP1s,后者进入细胞核激活一系列靶基因的表达,帮助细胞恢复蛋白质稳态。XBP1的靶基因主要涉及内质网相关降解(ERAD)、分子伴侣合成和脂质代谢等。XBP1的功能异常与多种疾病相关,如糖尿病、神经退行性疾病(阿尔茨海默病、帕金森病)和癌症。在癌症中,XBP1的过度表达可能促进肿瘤细胞存活和耐药性,而XBP1缺失可能导致内质网应激加剧,引发细胞凋亡。XBP1属于CREB/ATF转录因子家族,该家族成员通常通过结合DNA的特定序列(如CRE或ATF位点)调控基因表达,参与应激反应、代谢和细胞周期等过程。XBP1过表达可能增强细胞对内质网应激的耐受性,但长期激活可能导致病理状态;而XBP1表达降低则可能削弱细胞的应激适应能力,诱发炎症或凋亡。此外,XBP1与其他UPR通路分子(如ATF6、PERK)协同作用,共同维持内质网功能。在免疫系统中,XBP1还调控浆细胞的分化和抗体分泌,其突变可能导致免疫缺陷。

This gene encodes a transcription factor that regulates MHC class II genes by binding to a promoter element referred to as an X box. This gene product is a bZIP protein, which was also identified as a cellular transcription factor that binds to an enhancer in the promoter of the T cell leukemia virus type 1 promoter. It may increase expression of viral proteins by acting as the DNA binding partner of a viral transactivator. It has been found that upon accumulation of unfolded proteins in the endoplasmic reticulum (ER), the mRNA of this gene is processed to an active form by an unconventional splicing mechanism that is mediated by the endonuclease inositol-requiring enzyme 1 (IRE1). The resulting loss of 26 nt from the spliced mRNA causes a frame-shift and an isoform XBP1(S), which is the functionally active transcription factor. The isoform encoded by the unspliced mRNA, XBP1(U), is constitutively expressed, and thought to function as a negative feedback regulator of XBP1(S), which shuts off transcription of target genes during the recovery phase of ER stress. A pseudogene of XBP1 has been identified and localized to chromosome 5. [provided by RefSeq, Jul 2008]

这个基因编码通过结合被称为一个X框的启动子元件调节MHC II类基因的转录因子。这个基因的产物是一个的bZIP蛋白,其也被确定为结合到增强的T细胞白血病病毒1型启动子的启动子的细胞转录因子。它可以通过作为病毒反的DNA结合伙伴增加病毒蛋白质的表达。业已发现,在内质网(ER)折叠蛋白的积累,该基因的mRNA通过一个由内切核酸酶肌醇需要酶1(IRE1)介导的一种非常规的剪接机制加工成活性形式。核苷酸从剪接的mRNA的26造成的损失会导致移码和同种型XBP1(S),它是有功能活性的转录因子。由未剪接的mRNA所编码的同种型,XBP1(U)组成型表达,并且被认为充当XBP1(S)的一个负反馈调节器,其在ER应激的恢复阶段关闭靶基因的转录。 XBP1的假基因已被确定和定位于[由RefSeq的,2008年7月提供] 5号染色体

XBP1基因的碱基序列:[NCBI]
Loading Gene Browser...
XBP1基因的碱基突变:           仅显示部分snp
rs14963       rs1064181       rs2097461       rs2228260       rs2239815       rs2267131       rs2269575       rs2269576       rs2269577       rs2269578       rs3788409       rs5752800       rs5762803       rs5762808       rs5762809       rs6005888       rs11439270      

XBP1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TAAAGTTCTGCTTCTGTCGG
58
TTTCAGTTTCCTCCTCAGC
57
TCAGATTCAGAGTCTGATATCCTG
59
CTTCTGGGTAGACCTCTGG
59
TAAAGTTCTGCTTCTGTCGG
58
TTTCAGTTTCCTCCTCAGC
57
TAAAGTTCTGCTTCTGTCGG
58
TTTCAGTTTCCTCCTCAGC
57
CTCGGACATGAGGAAACTG
58
GTTCCAGCTCACTCATTCG
59
TAAAGTTCTGCTTCTGTCGG
58
TTTCAGTTTCCTCCTCAGC
57
CAGATTCAGAGTCTGATATCCTG
58
CCTTCTGGGTAGACCTCTG
59
TAAAGTTCTGCTTCTGTCGG
58
TTTCAGTTTCCTCCTCAGC
57
CAGATTCAGAGTCTGATATCCTG
58
CTTCTGGGTAGACCTCTGG
59
CTAAAGTTCTGCTTCTGTCGG
59
TTCAGTTTCCTCCTCAGCG
60
转录因子
影响基因
影响类型
参考文献链接(PubMed)
ATF6
XBP1
Unknown
BACH2
XBP1
Repression
BCL6
XBP1
Repression
CEBPB
XBP1
Activation
PAX5
XBP1
Repression
XBP1
CCL2
Unknown
XBP1
CXCL8
Unknown
XBP1
DDIT3
Unknown
XBP1
EDEM2
Unknown
XBP1
ERN1
Unknown

XBP1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

XBP1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0003700
B1AHH1 (UniProtKB)
IEA
GO:0006355
B1AHH1 (UniProtKB)
IEA
GO:0043565
B1AHH1 (UniProtKB)
IEA
GO:0003700
B1AHH2 (UniProtKB)
IEA
GO:0006355
B1AHH2 (UniProtKB)
IEA
GO:0043565
B1AHH2 (UniProtKB)
IEA
GO:0000122
P17861 (UniProtKB)
IDA
GO:0000122
P17861 (UniProtKB)
IDA
GO:0000122
P17861 (UniProtKB)
IDA
GO:0000977
P17861 (UniProtKB)
IDA
GO:0000977
P17861 (UniProtKB)
IDA
GO:0000981
P17861 (UniProtKB)
IEA
GO:0001047
P17861 (UniProtKB)
ISS
GO:0001085
P17861 (UniProtKB)
IEA
GO:0001158
P17861 (UniProtKB)
IDA
GO:0001525
P17861 (UniProtKB)
ISS
GO:0001889
P17861 (UniProtKB)
ISS
GO:0001934
P17861 (UniProtKB)
IDA
GO:0001935
P17861 (UniProtKB)
IEA
GO:0001935
P17861 (UniProtKB)
IDA
GO:0002020
P17861 (UniProtKB)
IPI
GO:0002639
P17861 (UniProtKB)
IDA
GO:0003677
P17861 (UniProtKB)
TAS
GO:0003700
P17861 (UniProtKB)
IDA
GO:0003700
P17861 (UniProtKB)
IDA
GO:0005515
P17861 (UniProtKB)
IPI
GO:0005515
P17861 (UniProtKB)
IPI
GO:0005515
P17861 (UniProtKB)
IPI
GO:0005515
P17861 (UniProtKB)
IPI
GO:0005515
P17861 (UniProtKB)
IPI
GO:0005515
P17861 (UniProtKB)
IPI
GO:0005515
P17861 (UniProtKB)
IPI
GO:0005515
P17861 (UniProtKB)
IPI
GO:0005634
P17861 (UniProtKB)
IDA
GO:0005634
P17861 (UniProtKB)
IDA
GO:0005634
P17861 (UniProtKB)
IDA
GO:0005634
P17861 (UniProtKB)
IDA
GO:0005634
P17861 (UniProtKB)
IDA
GO:0005654
P17861 (UniProtKB)
TAS
GO:0005654
P17861 (UniProtKB)
TAS
GO:0005737
P17861 (UniProtKB)
ISS
GO:0005737
P17861 (UniProtKB)
ISS
GO:0005737
P17861 (UniProtKB)
IDA
GO:0005737
P17861 (UniProtKB)
IDA
GO:0005783
P17861 (UniProtKB)
IDA
GO:0005789
P17861 (UniProtKB)
IEA
GO:0005829
P17861 (UniProtKB)
IDA
GO:0006366
P17861 (UniProtKB)
ISS
GO:0006511
P17861 (UniProtKB)
ISS
GO:0006633
P17861 (UniProtKB)
TAS
GO:0006914
P17861 (UniProtKB)
IEA
GO:0006955
P17861 (UniProtKB)
TAS
GO:0006990
P17861 (UniProtKB)
ISS
GO:0006990
P17861 (UniProtKB)
IDA
GO:0006996
P17861 (UniProtKB)
TAS
GO:0007517
P17861 (UniProtKB)
IEA
GO:0010506
P17861 (UniProtKB)
IEA
GO:0010508
P17861 (UniProtKB)
IDA
GO:0010832
P17861 (UniProtKB)
ISS
GO:0014065
P17861 (UniProtKB)
IDA
GO:0015031
P17861 (UniProtKB)
IEA
GO:0016021
P17861 (UniProtKB)
IEA
GO:0016049
P17861 (UniProtKB)
IDA
GO:0019901
P17861 (UniProtKB)
IPI
GO:0030176
P17861 (UniProtKB)
IDA
GO:0030331
P17861 (UniProtKB)
TAS
GO:0030968
P17861 (UniProtKB)
ISS
GO:0031017
P17861 (UniProtKB)
IEA
GO:0031062
P17861 (UniProtKB)
IDA
GO:0031490
P17861 (UniProtKB)
IDA
GO:0031490
P17861 (UniProtKB)
IDA
GO:0031625
P17861 (UniProtKB)
IPI
GO:0031647
P17861 (UniProtKB)
IDA
GO:0031648
P17861 (UniProtKB)
IEA
GO:0031648
P17861 (UniProtKB)
IDA
GO:0031648
P17861 (UniProtKB)
IDA
GO:0031648
P17861 (UniProtKB)
IMP
GO:0031670
P17861 (UniProtKB)
ISS
GO:0032008
P17861 (UniProtKB)
IMP
GO:0032869
P17861 (UniProtKB)
ISS
GO:0034599
P17861 (UniProtKB)
IDA
GO:0034976
P17861 (UniProtKB)
IDA
GO:0034976
P17861 (UniProtKB)
IDA
GO:0034976
P17861 (UniProtKB)
IDA
GO:0034976
P17861 (UniProtKB)
IDA
GO:0034976
P17861 (UniProtKB)
IDA
GO:0034976
P17861 (UniProtKB)
IDA
GO:0035356
P17861 (UniProtKB)
ISS
GO:0035924
P17861 (UniProtKB)
IDA
GO:0035924
P17861 (UniProtKB)
IDA
GO:0036312
P17861 (UniProtKB)
IEA
GO:0036498
P17861 (UniProtKB)
TAS
GO:0036498
P17861 (UniProtKB)
TAS
GO:0036498
P17861 (UniProtKB)
TAS
GO:0036500
P17861 (UniProtKB)
TAS
GO:0042149
P17861 (UniProtKB)
ISS
GO:0042632
P17861 (UniProtKB)
ISS
GO:0042803
P17861 (UniProtKB)
TAS
GO:0042826
P17861 (UniProtKB)
IEA
GO:0042993
P17861 (UniProtKB)
IDA
GO:0043066
P17861 (UniProtKB)
ISS
GO:0044212
P17861 (UniProtKB)
IDA
GO:0044212
P17861 (UniProtKB)
IDA
GO:0044212
P17861 (UniProtKB)
IDA
GO:0045348
P17861 (UniProtKB)
IMP
GO:0045579
P17861 (UniProtKB)
IDA
GO:0045582
P17861 (UniProtKB)
IDA
GO:0045600
P17861 (UniProtKB)
ISS
GO:0045944
P17861 (UniProtKB)
ISS
GO:0045944
P17861 (UniProtKB)
IDA
GO:0045944
P17861 (UniProtKB)
IDA
GO:0045944
P17861 (UniProtKB)
IDA
GO:0045944
P17861 (UniProtKB)
IMP
GO:0045944
P17861 (UniProtKB)
IDA
GO:0045944
P17861 (UniProtKB)
IDA
GO:0045944
P17861 (UniProtKB)
IDA
GO:0046982
P17861 (UniProtKB)
IDA
GO:0046982
P17861 (UniProtKB)
TAS
GO:0048010
P17861 (UniProtKB)
IDA
GO:0048666
P17861 (UniProtKB)
ISS
GO:0051024
P17861 (UniProtKB)
ISS
GO:0055089
P17861 (UniProtKB)
ISS
GO:0055092
P17861 (UniProtKB)
ISS
GO:0060612
P17861 (UniProtKB)
ISS
GO:0060691
P17861 (UniProtKB)
IEA
GO:0070059
P17861 (UniProtKB)
IEA
GO:0071222
P17861 (UniProtKB)
IDA
GO:0071230
P17861 (UniProtKB)
ISS
GO:0071332
P17861 (UniProtKB)
ISS
GO:0071333
P17861 (UniProtKB)
ISS
GO:0071353
P17861 (UniProtKB)
ISS
GO:0071375
P17861 (UniProtKB)
ISS
GO:0071498
P17861 (UniProtKB)
IDA
GO:0071498
P17861 (UniProtKB)
IDA
GO:0071498
P17861 (UniProtKB)
IDA
GO:0071498
P17861 (UniProtKB)
IDA
GO:0071499
P17861 (UniProtKB)
IDA
GO:0071499
P17861 (UniProtKB)
IDA
GO:1900100
P17861 (UniProtKB)
IDA
GO:1900102
P17861 (UniProtKB)
IDA
GO:1900103
P17861 (UniProtKB)
IMP
GO:1900413
P17861 (UniProtKB)
TAS
GO:1901800
P17861 (UniProtKB)
IEA
GO:1901985
P17861 (UniProtKB)
IDA
GO:1902236
P17861 (UniProtKB)
IDA
GO:1903071
P17861 (UniProtKB)
TAS
GO:1903489
P17861 (UniProtKB)
ISS
GO:1990418
P17861 (UniProtKB)
ISS
GO:1990440
P17861 (UniProtKB)
TAS
GO:2000347
P17861 (UniProtKB)
ISS
GO:2000353
P17861 (UniProtKB)
IDA
GO:2000778
P17861 (UniProtKB)
ISS

可能调控 XBP1基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Glioma 0.120271442 1 0 BeFree_CTD_human
Fatty Liver 0.120271442 2 0 BeFree_CTD_human
Non-alcoholic Fatty Liver Disease 0.120271442 2 0 BeFree_CTD_human
Squamous cell carcinoma of esophagus 0.12 1 1 GWASCAT
MAJOR AFFECTIVE DISORDER 7 0.12 0 0 CTD_human
Malignant neoplasm of esophagus 0.12 1 1 GWASCAT
MAJOR AFFECTIVE DISORDER 1 0.12 0 0 CTD_human
Schizophrenia 0.013549688 6 0 BeFree_GAD_LHGDN
Bipolar Disorder 0.011530042 15 0 BeFree_GAD_LHGDN
Mammary Neoplasms 0.008444493 3 0 BeFree_LHGDN

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