WDPCP (WD repeat containing planar cell polarity effector)

symbol:
WDPCP
locus group:
protein-coding gene
location:
2p15
gene_family:
alias symbol:
hFrtz|fritz|BBS15|CPLANE5
alias name:
ciliogenesis and planar polarity e…
entrez id:
51057
ensembl gene id:
ENSG00000143951
ucsc gene id:
uc002sch.4
refseq accession:
NM_015910
hgnc_id:
HGNC:28027
approved reserved:
2009-02-25
2p15
基因染色体位置图

WDPCP(WD Repeat Containing Planar Cell Polarity Effector)是一个编码含有WD重复结构域蛋白的基因,主要参与平面细胞极性(PCP)的调控,对胚胎发育和组织形态发生至关重要。其表达产物通过与细胞骨架和膜蛋白相互作用,协调细胞定向排列和运动,尤其在纤毛形成和功能中发挥关键作用。WDPCP的突变会导致纤毛结构或功能异常,与多种纤毛病(如Bardet-Biedl综合征)相关,表现为视网膜退化、肥胖、多指畸形等。该基因属于BBSome复合体相关基因家族,该家族成员共同参与纤毛组装和信号传导,维持细胞极性。WDPCP过表达可能干扰正常纤毛发生,引发细胞迁移紊乱;而表达降低则会导致纤毛缺失或功能障碍,影响器官发育(如心脏左右不对称性缺陷)。此外,WDPCP与Frizzled/PCP通路相互作用,其异常表达可能破坏Wnt信号传导,进而影响胚胎神经管闭合等过程。研究还发现WDPCP在癌症转移中可能通过调控细胞极性参与肿瘤侵袭。

This gene encodes a cytoplasmic WD40 repeat protein. A similar gene in frogs encodes a planar cell polarity protein that plays a critical role in collective cell movement and ciliogenesis by mediating septin localization. Mutations in this gene are associated with Bardet-Biedl syndrome 15 and may also play a role in Meckel-Gruber syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2014]

该基??因编码一种细胞质WD40重复蛋白。在青蛙类似的基因编码,播放通过介导的Septin本地化集体细胞运动和ciliogenesis关键作用的平面细胞极性蛋白。在这种基因突变与巴比二氏综合征15相关联,并且还可能在梅克尔-格鲁伯综合征的作用。选择性剪接结果在多个抄本变形。 [由RefSeq的,2014年6月提供]

WDPCP基因的碱基序列:[NCBI]
Loading Gene Browser...
WDPCP基因的碱基突变:           仅显示部分snp
rs6734827       rs10439490       rs11344156       rs11696083       rs13009267       rs13432479       rs57315828       rs115570120       rs116882788       rs140437615       rs141439605       rs146972196       rs147842774       rs149987446       rs181892067       rs184659805       rs190819674      

WDPCP基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
ATTCTTCCATCACTTGCTCAG
58
GCATGATGCCATAAAGAGGT
58
AGATAGAGATTCCTTCTGCCA
58
ATGTCTCTATCCGCAATGTG
58
CGAGACAGTTGATTGAAGATCAG
60
TTTCTGTCATCGTGAGTTTGAG
59
AGGAAGACTAGAGGTTCTGAG
58
TGATAAGGCTGTTTGGTGC
59
AGAATACCTTACACATTGCGG
59
GGATAATCTCGTGCTGGTG
58
CTCCCGAGACAGGATAGAG
58
ATTCTTCAAAGACCACAGGT
57
TTCTTCCATCACTTGCTCAG
58
CCAGGAGTTCATAAAGAGGTC
58
CTACATTCAGCTCTTCTCACAG
59
ACTCCATCTTCTTGGTAAACTG
58
GAATACTGAATGGCTCTTCTAACAG
60
CAGTTCTCCGTCTTCTGCA
60
GGATTATAGACTTTGCCAACCC
59
TGGTGTTGGAAGGTGAGAG
59
      尚未收录相关数据

WDPCP基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

WDPCP基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0001822
O95876 (UniProtKB)
IEA
GO:0002093
O95876 (UniProtKB)
IEA
GO:0005856
O95876 (UniProtKB)
IEA
GO:0005930
O95876 (UniProtKB)
ISS
GO:0007224
O95876 (UniProtKB)
IEA
GO:0010762
O95876 (UniProtKB)
IEA
GO:0016476
O95876 (UniProtKB)
ISS
GO:0032185
O95876 (UniProtKB)
ISS
GO:0032880
O95876 (UniProtKB)
ISS
GO:0042384
O95876 (UniProtKB)
IEA
GO:0042733
O95876 (UniProtKB)
IEA
GO:0043010
O95876 (UniProtKB)
IEA
GO:0045184
O95876 (UniProtKB)
IEA
GO:0051893
O95876 (UniProtKB)
IEA
GO:0055123
O95876 (UniProtKB)
IEA
GO:0060021
O95876 (UniProtKB)
IEA
GO:0060271
O95876 (UniProtKB)
ISS
GO:0060541
O95876 (UniProtKB)
IEA
GO:0072358
O95876 (UniProtKB)
IEA
GO:0090521
O95876 (UniProtKB)
IEA
GO:0097541
O95876 (UniProtKB)
IEA
GO:1900027
O95876 (UniProtKB)
IEA
GO:2000114
O95876 (UniProtKB)
IEA
GO:0005886
O95876 (UniProtKB)
ISS
GO:0005938
O95876 (UniProtKB)
ISS
GO:0016324
O95876 (UniProtKB)
ISS

可能调控 WDPCP基因的相关microRNA:     

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Bardet-Biedl Syndrome 0.240271442 1 0 BeFree_CTD_human_ORPHANET
Orstavik Lindemann Solberg syndrome 0.24 1 2 CLINVAR_UNIPROT
Meckel-Gruber syndrome 0.12 0 0 ORPHANET
Obesity 0.12 1 1 GWASCAT
Heart defect, tongue hamartoma and polysyndactyly 0.12 0 0 ORPHANET
BARDET-BIEDL SYNDROME 15 0.12 0 1 CLINVAR
Atrial Fibrillation 0.002367032 1 1 GAD
Polysyndactyly 0.000271442 1 0 BeFree
Hamartoma of tongue 0.000271442 1 0 BeFree

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