TNFSF11 (TNF superfamily member 11)

symbol:
TNFSF11
locus group:
protein-coding gene
location:
13q14
gene_family:
CD molecules|Tumor necrosis factor (ligand) superfamily
alias symbol:
TRANCE|RANKL|OPGL|ODF|CD254
alias name:
None
entrez id:
8600
ensembl gene id:
ENSG00000120659
ucsc gene id:
uc001uyu.3
refseq accession:
NM_003701
hgnc_id:
HGNC:11926
approved reserved:
1998-12-04
13q14
基因染色体位置图

This gene encodes a member of the tumor necrosis factor (TNF) cytokine family which is a ligand for osteoprotegerin and functions as a key factor for osteoclast differentiation and activation. This protein was shown to be a dentritic cell survival factor and is involved in the regulation of T cell-dependent immune response. T cell activation was reported to induce expression of this gene and lead to an increase of osteoclastogenesis and bone loss. This protein was shown to activate antiapoptotic kinase AKT/PKB through a signaling complex involving SRC kinase and tumor necrosis factor receptor-associated factor (TRAF) 6, which indicated this protein may have a role in the regulation of cell apoptosis. Targeted disruption of the related gene in mice led to severe osteopetrosis and a lack of osteoclasts. The deficient mice exhibited defects in early differentiation of T and B lymphocytes, and failed to form lobulo-alveolar mammary structures during pregnancy. Two alternatively spliced transcript variants have been found. [provided by RefSeq, Jul 2008]

该基因编码肿瘤坏死因子(TNF)细胞因子家族,其为骨和用作用于破骨细胞的分化及活化的关键因素的配位体中的一员。这种蛋白质被证明是一个树突状细胞存活因子,并参与T细胞依赖的免疫应答的调节。 T细胞活化据报道,诱导该基因和铅的表达增加破骨细胞和骨骼的损失。这种蛋白质被证明通过一个信号复合涉及SRC激酶和肿瘤坏死因子受体相关因子(TRAF)6,这表明该蛋白可能在细胞凋亡的调节作用来激活抗凋亡激酶AKT / PKB。在小鼠体内相关基因的靶向破坏导致严重的骨硬化症和缺乏破骨细胞。不足的小鼠表现出在T和B淋巴细胞的早期分化缺陷,未能在怀孕期间,以形成lobulo肺泡乳腺结构。两个可变剪接转录变异体已被发现。 [由RefSeq的,2008年7月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
TNFSF11基因的碱基突变:           仅显示部分snp
rs189398       rs238222       rs238223       rs346574       rs346575       rs346576       rs346586       rs346587       rs346588       rs346589       rs346590       rs346591       rs346592       rs346603       rs346604       rs387856       rs443188      

TNFSF11基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AAACAGGCCTTTCAAGGAG
58
CATCCACCATCGCTTTCTC
59
AAACAGGCCTTTCAAGGAG
58
CATCCACCATCGCTTTCTC
59
AAACAGGCCTTTCAAGGAG
58
CATCCACCATCGCTTTCTC
59
TATTTCAGAGCGCAGATGGA
59
TGACTCTCCAGAGTTGTGTC
59
TATTTCAGAGCGCAGATGGA
59
TGACTCTCCAGAGTTGTGTC
59
TAGATCTGGCCAAGAGGAG
58
TTATGGGAACCAGATGGGA
58
ATTTCAGAGCGCAGATGGA
60
TGACTCTCCAGAGTTGTGTC
59
ATTTCAGAGCGCAGATGGA
60
TGACTCTCCAGAGTTGTGTC
59
TAGATCTGGCCAAGAGGAG
58
TTATGGGAACCAGATGGGA
58
TAGATCTGGCCAAGAGGAG
58
TTATGGGAACCAGATGGGA
58
转录因子
影响基因
影响类型
参考文献链接(PubMed)
DACH1
TNFSF11
Repression
E2F1
TNFSF11
Activation
HSF2
TNFSF11
Activation

TNFSF11基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

TNFSF11基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0001503
O14788 (UniProtKB)
IEA
GO:0002158
O14788 (UniProtKB)
IEA
GO:0002548
O14788 (UniProtKB)
IDA
GO:0005125
O14788 (UniProtKB)
IDA
GO:0005125
O14788 (UniProtKB)
IDA
GO:0005125
O14788 (UniProtKB)
NAS
GO:0005164
O14788 (UniProtKB)
NAS
GO:0005164
O14788 (UniProtKB)
NAS
GO:0005576
O14788 (UniProtKB)
NAS
GO:0005576
O14788 (UniProtKB)
NAS
GO:0005576
O14788 (UniProtKB)
TAS
GO:0005576
O14788 (UniProtKB)
TAS
GO:0005576
O14788 (UniProtKB)
TAS
GO:0005576
O14788 (UniProtKB)
TAS
GO:0005576
O14788 (UniProtKB)
TAS
GO:0005576
O14788 (UniProtKB)
TAS
GO:0005576
O14788 (UniProtKB)
TAS
GO:0005615
O14788 (UniProtKB)
IEA
GO:0005737
O14788 (UniProtKB)
IEA
GO:0005886
O14788 (UniProtKB)
TAS
GO:0005886
O14788 (UniProtKB)
TAS
GO:0005886
O14788 (UniProtKB)
TAS
GO:0005886
O14788 (UniProtKB)
TAS
GO:0005886
O14788 (UniProtKB)
TAS
GO:0005886
O14788 (UniProtKB)
TAS
GO:0005886
O14788 (UniProtKB)
TAS
GO:0005887
O14788 (UniProtKB)
NAS
GO:0006955
O14788 (UniProtKB)
NAS
GO:0007257
O14788 (UniProtKB)
IEA
GO:0009887
O14788 (UniProtKB)
IEA
GO:0019221
O14788 (UniProtKB)
IDA
GO:0030316
O14788 (UniProtKB)
ISS
GO:0030316
O14788 (UniProtKB)
IDA
GO:0030316
O14788 (UniProtKB)
NAS
GO:0032813
O14788 (UniProtKB)
IC
GO:0033209
O14788 (UniProtKB)
ISS
GO:0033209
O14788 (UniProtKB)
TAS
GO:0033209
O14788 (UniProtKB)
TAS
GO:0033598
O14788 (UniProtKB)
IEA
GO:0034112
O14788 (UniProtKB)
IDA
GO:0038001
O14788 (UniProtKB)
IEA
GO:0043123
O14788 (UniProtKB)
IEA
GO:0043406
O14788 (UniProtKB)
IDA
GO:0045453
O14788 (UniProtKB)
IEA
GO:0045672
O14788 (UniProtKB)
IDA
GO:0045672
O14788 (UniProtKB)
IDA
GO:0045780
O14788 (UniProtKB)
IDA
GO:0045944
O14788 (UniProtKB)
IDA
GO:0050870
O14788 (UniProtKB)
IDA
GO:0051091
O14788 (UniProtKB)
ISS
GO:0051092
O14788 (UniProtKB)
IDA
GO:0051260
O14788 (UniProtKB)
IEA
GO:0051466
O14788 (UniProtKB)
ISS
GO:0051897
O14788 (UniProtKB)
IEA
GO:0055074
O14788 (UniProtKB)
IEA
GO:0060749
O14788 (UniProtKB)
IEA
GO:0070371
O14788 (UniProtKB)
IEA
GO:0071812
O14788 (UniProtKB)
ISS
GO:0071847
O14788 (UniProtKB)
IDA
GO:0071848
O14788 (UniProtKB)
IDA
GO:1902533
O14788 (UniProtKB)
IDA
GO:2001206
O14788 (UniProtKB)
IEA

可能调控 TNFSF11基因的相关microRNA:     

MINT

BioGrid

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Osteopetrosis, mild autosomal recessive form 0.44 1 1 CLINVAR_CTD_human_MGD_UNIPROT
Osteoporosis 0.140984357 18 0 BeFree_CTD_human_GAD_LHGDN
Osteopetrosis 0.125991584 4 0 BeFree_CTD_human_LHGDN
Alveolar Bone Loss 0.1254487 3 0 CTD_human_LHGDN
Chronic Periodontitis 0.123810118 6 2 BeFree_CTD_human_LHGDN
Chronic Lymphocytic Leukemia 0.122995792 2 0 BeFree_CTD_human_LHGDN
Hypercalcemia 0.120542884 3 0 BeFree_CTD_human
Infantile malignant osteopetrosis 0.12 0 0 ORPHANET
Lytic lesion 0.12 1 0 CTD_human
Myocarditis 0.08 1 0 RGD

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