TMEFF2 (transmembrane protein with EGF like and two follistatin like domains 2)

symbol:
TMEFF2
locus group:
protein-coding gene
location:
2q32.3
gene_family:
alias symbol:
TENB2|HPP1|TR|TPEF|CT120.2
alias name:
transmembrane protein TENB2|tomore…
entrez id:
23671
ensembl gene id:
ENSG00000144339
ucsc gene id:
uc002utc.4
refseq accession:
NM_016192
hgnc_id:
HGNC:11867
approved reserved:
1998-10-02
2q32.3
基因染色体位置图

This gene encodes a member of the tomoregulin family of transmembrane proteins. This protein has been shown to function as both an oncogene and a tumor suppressor depending on the cellular context and may regulate prostate cancer cell invasion. Multiple soluble forms of this protein have been identified that arise from both an alternative splice variant and ectodomain shedding. Additionally, this gene has been found to be hypermethylated in multiple cancer types. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2015]

该基??因编码的tomoregulin家族的跨膜蛋白的成员。此蛋白已被示出为根据蜂窝上下文既致癌基因和肿瘤抑制和可调节前列腺癌细胞侵袭的功能。这种蛋白质的多种可溶形式已被确定使得来自两个备选剪接变体和胞外域脱落引起的。此外,该基因已被发现在多种癌症类型被甲基化。选择性剪接结果在多个抄本变形。 [由RefSeq的,2015年2月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
TMEFF2基因的碱基突变:           仅显示部分snp
rs2356753       rs2356754       rs2356755       rs2884022       rs2884023       rs3053696       rs3738883       rs4303667       rs4308083       rs4324279       rs4330061       rs4429414       rs4449077       rs4853488       rs4853657       rs5837275       rs5837276      

TMEFF2基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CCAACACCTGTAAATTTGATGG
58
CATTGTTGCACTTGAACTGAC
59
ATGTCTTTGGGTCGATGTC
58
TCTTGCTTTCTCTTCTCTGC
58
GGGTCGATGTCAAGATAACAC
59
ACACTTTCCTCTTGCTTTCTC
59
CCAACACCTGTAAATTTGATGG
58
CATTGTTGCACTTGAACTGAC
59
ATGTCTTAATCGCAGCTGTG
59
CCTAAAGTTTGGCCCTTGTG
60
CTGCATCACAAGGAAATGC
58
TGTATTGTCTGAACTGTAGTGC
59
GTCTGTCAGTTCAAGTGCA
58
CAGGTAACACTCATTCTGGT
57
TTAATCGCAGCTGTGATTGG
59
CCTAAAGTTTGGCCCTTGTG
60
ATGTCTTTGGGTCGATGTC
58
CTTGCTTTCTCTTCTCTGCA
58
TCTGCATCACAAGGAAATGC
59
GTATTGTCTGAACTGTAGTGCC
59
      尚未收录相关数据

TMEFF2基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

TMEFF2基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0003674
Q9UIK5 (UniProtKB)
ND
GO:0005576
Q9UIK5 (UniProtKB)
IEA
GO:0016021
Q9UIK5 (UniProtKB)
NAS
GO:0016021
Q9UIK5 (UniProtKB)
NAS
GO:0030336
Q9UIK5 (UniProtKB)
IDA
GO:0044319
Q9UIK5 (UniProtKB)
IDA
GO:0045720
Q9UIK5 (UniProtKB)
IMP
GO:0051497
Q9UIK5 (UniProtKB)
IDA

可能调控 TMEFF2基因的相关microRNA:     

BioGrid

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Diabetes Mellitus 0.122367032 1 1 GAD_GWASCAT
Prostatic Neoplasms 0.120271442 2 0 BeFree_CTD_human
Polycystic Ovary Syndrome 0.12 1 0 CTD_human
Diabetes 0.12 1 1 GWASCAT
Colorectal Neoplasms 0.008173051 3 0 LHGDN
Adenocarcinoma 0.006534468 4 0 BeFree_LHGDN
Colorectal Cancer 0.002985861 11 0 BeFree
Stomach Neoplasms 0.00272435 1 0 LHGDN
Bladder Neoplasm 0.00272435 1 0 LHGDN
Esophageal Neoplasms 0.00272435 1 0 LHGDN

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