SSX3 (SSX family member 3)

symbol:
SSX3
locus group:
protein-coding gene
location:
Xp11.23
gene_family:
alias symbol:
CT5.3
alias name:
None
entrez id:
10214
ensembl gene id:
ENSG00000165584
ucsc gene id:
uc004djd.3
refseq accession:
NM_021014
hgnc_id:
HGNC:11337
approved reserved:
1999-06-10
Xp11.23
基因染色体位置图

The product of this gene belongs to the family of highly homologous synovial sarcoma X (SSX) breakpoint proteins. These proteins may function as transcriptional repressors. They are also capable of eliciting spontaneous humoral and cellular immune responses in cancer patients, and are potentially useful targets in cancer vaccine-based immunotherapy. While some of the related SSX genes are involved in t(X;18)(p11.2;q11.2) translocations that are characteristically found in all synovial sarcomas, this gene does not appear to be involved in such translocations. [provided by RefSeq, Jul 2013]

该基??因的产物属于家庭高度同源的滑膜肉瘤X(SSX)断点蛋白质。这些蛋白质可以充当转录抑制。它们也能够引发癌症患者自发的体液和细胞免疫应答,且是潜在的癌症基于疫苗免疫治疗的目标。虽然一些相关SSX基因参与T(X 18)(P11.2; q11.2),它们在所有的滑膜肉瘤特征发现易位,该基因似乎不参与这些易位。 [由RefSeq的,2013年7月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
SSX3基因的碱基突变:           仅显示部分snp
rs782821094       rs782820828       rs782818691       rs782818116       rs782817683       rs782813407       rs782807459       rs782802651       rs782806336       rs782800971       rs782800226       rs782800803       rs782796390       rs782798652       rs782799267       rs782793029       rs782793572      

SSX3基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GAAGATTAACATGATATCTGGACCC
59
ATAAATCACCAGCTGCTTTCTC
59
GAAGATTAACATGATATCTGGACCC
59
ATAAATCACCAGCTGCTTTCTC
59
ATCTTCCCGAAGATCATGC
57
TCTTCTCAGAGGTAGTTGGT
57
CCTAACCGTGGGAATCAGG
59
CTTCTTGGGCATGATCTTCG
59
GTTTCGAAGGAAGTGCCAG
59
AGTATCTCTGAAGGACACCAG
59
TCATGCGTAATAAACGGGTC
59
GGACGTTGAACCTGATTCC
59
GAAGATTAACATGATATCTGGACCC
59
TAAATCACCAGCTGCTTTCTC
59
CTCTAGAGTTTGGAAACCTTTACC
59
CTTCTTGGGCATGATCTTCG
59
TTCATGCGTAATAAACGGGTC
59
GACGTTGAACCTGATTCCC
59
GAAGATTAACATGATATCTGGACCC
59
TAAATCACCAGCTGCTTTCTC
59
      尚未收录相关数据

SSX3基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

SSX3基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0003676
A0A087WWQ6 (UniProtKB)
IEA
GO:0005622
A0A087WWQ6 (UniProtKB)
IEA
GO:0006355
A0A087WWQ6 (UniProtKB)
IEA
GO:0003676
Q99909 (UniProtKB)
IEA
GO:0003714
Q99909 (UniProtKB)
IBA
GO:0005515
Q99909 (UniProtKB)
IPI
GO:0005515
Q99909 (UniProtKB)
IPI
GO:0005515
Q99909 (UniProtKB)
IPI
GO:0005515
Q99909 (UniProtKB)
IPI
GO:0005515
Q99909 (UniProtKB)
IPI
GO:0005515
Q99909 (UniProtKB)
IPI
GO:0005515
Q99909 (UniProtKB)
IPI
GO:0005515
Q99909 (UniProtKB)
IPI
GO:0005515
Q99909 (UniProtKB)
IPI
GO:0005634
Q99909 (UniProtKB)
IBA
GO:0006351
Q99909 (UniProtKB)
IEA
GO:0006355
Q99909 (UniProtKB)
IEA
GO:1903507
Q99909 (UniProtKB)
IBA

可能调控 SSX3基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源

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