SPANXD (SPANX family member D)

symbol:
SPANXD
locus group:
protein-coding gene
location:
Xq27.2
gene_family:
alias symbol:
CT11.4
alias name:
cancer/testis antigen family 11, m…
entrez id:
64648
ensembl gene id:
ENSG00000196406
ucsc gene id:
uc004fbq.5
refseq accession:
NM_032417
hgnc_id:
HGNC:14332
approved reserved:
2001-01-03
Xq27.2
基因染色体位置图

Temporally regulated transcription and translation of several testis-specific genes is required to initiate the series of molecular and morphological changes in the male germ cell lineage necessary for the formation of mature spermatozoa. This gene is a member of the SPANX family of cancer/testis-associated genes, which are located in a cluster on chromosome X. The SPANX genes encode differentially expressed testis-specific proteins that localize to various subcellular compartments. This particular gene encodes a sperm protein that is associated with the nucleus but, although a role in spermatogenesis is suggested, the specific function of this family member has not yet been determined. Polymorphisms in this gene may be associated with prostate cancer susceptibility. [provided by RefSeq, Apr 2014]

几种睾丸特异性基因短暂调节转录和翻译,需要启动一系列的雄性生殖细胞系必要的成熟精子形成的分子和形态的变化。此基因是SPANX家族的癌症/睾丸相关基因,它位于X染色体上的群集的SPANX基因编码的差异表达睾丸特异性蛋白质定位于各种亚细胞区室中的一员。这个特定基因编码与该核,但相关联的精子蛋白质,虽然在精子发生作用建议,该家族成员的特定功能还没有被确定。在这种基因多态性可能患有前列腺癌的易感性相关联。 [由RefSeq的,2014年4月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
SPANXD基因的碱基突变:           仅显示部分snp
rs782810757       rs782814316       rs782762253       rs782771507       rs782778491       rs782780182       rs782780479       rs782781827       rs782792565       rs782795519       rs782810261       rs782727820       rs782744745       rs782745133       rs782694090       rs782695664       rs782704404      

SPANXD基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TGGACAAACAATCCAGTGC
59
GTCTGAGTACCCACTCGAG
59
GGACAAACAATCCAGTGCC
60
GTCTGAGTACCCACTCGAG
59
GACAAACAATCCAGTGCCG
60
GTCTGAGTACCCACTCGAG
59
      尚未收录相关数据

SPANXD基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

SPANXD基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005515
Q9BXN6 (UniProtKB)
IPI
GO:0005634
Q9BXN6 (UniProtKB)
IDA
GO:0005737
Q9BXN6 (UniProtKB)
IEA

可能调控 SPANXD基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Azoospermia 0.002367032 1 0 GAD
Oligospermia 0.002367032 1 0 GAD
Male infertility 0.002367032 1 0 GAD
Malignant neoplasm of prostate 0.000271442 1 0 BeFree
Prostate carcinoma 0.000271442 1 0 BeFree

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