SP110 (SP110 nuclear body protein)

symbol:
SP110
locus group:
protein-coding gene
location:
2q37.1
gene_family:
minor histocompatibility antigens
alias symbol:
None
alias name:
None
entrez id:
3431
ensembl gene id:
ENSG00000135899
ucsc gene id:
uc002vqg.5
refseq accession:
NM_080424
hgnc_id:
HGNC:5401
approved reserved:
1996-12-19
2q37.1
基因染色体位置图

The nuclear body is a multiprotein complex that may have a role in the regulation of gene transcription. This gene is a member of the SP100/SP140 family of nuclear body proteins and encodes a leukocyte-specific nuclear body component. The protein can function as an activator of gene transcription and may serve as a nuclear hormone receptor coactivator. In addition, it has been suggested that the protein may play a role in ribosome biogenesis and in the induction of myeloid cell differentiation. Alternative splicing has been observed for this gene and three transcript variants, encoding distinct isoforms, have been identified. [provided by RefSeq, Jul 2008]

核体是可以具有在基因转录的调节作用一多蛋白复合物。此基因是SP100 / SP140家族核体蛋白的成员,并进行编码的特定白细胞的核体的组成部分。该蛋白质可以作为基因转录的活化剂和可作为核激素受体共激活因子。此外,已经表明,该蛋白可能在核糖体合成和在髓样细胞分化的诱导中发挥作用。选择性剪接已经观察到这种基因和三个转录变异体,编码不同同种型,也已确定。 [由RefSeq的,2008年7月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
SP110基因的碱基突变:           仅显示部分snp
rs9061       rs722555       rs919178       rs930031       rs930032       rs957682       rs957683       rs958978       rs967006       rs967007       rs1004868       rs1004869       rs1007661       rs1047254       rs1063154       rs1124534       rs1129411      

SP110基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CCTATGCCATACACAAGCC
58
CCAGAGATTCCATGTACATTCTC
58
AAGAGGTCTTCAGGAAGCC
59
CAAAGTCAGAAGCCAGCTG
59
TTTACAAGGCTTCTGACTTTGG
59
CAAGGAAGAGTCCAGAAACC
58
GAGATCCTGAGTGAGTCGC
59
TCATTGGTCACTGAAGTGCT
59
TACGGAAATGTACACGGTG
57
TAAGTCAAGTCCTACCTGGC
58
GCTCTATGCCAGAGATAAGAG
57
TGTCTAGATGAGGCTGTCC
58
AATGAAACACGGATCCTCAG
58
GTTCTTTGCGTTCCTTCCT
58
GTCTTCAGGAAGCCAACAG
58
CAAAGTCAGAAGCCAGCTG
59
TGAGATCCTGAGTGAGTCG
58
CATTGGTCACTGAAGTGCT
58
GCTCTATGCCAGAGATAAGAG
57
TTCTTGTCTGAAGGTGTGC
58
      尚未收录相关数据

SP110基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

SP110基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005634
C9JZQ4 (UniProtKB)
IEA
GO:0005634
E7EM70 (UniProtKB)
IEA
GO:0005634
E9PHK4 (UniProtKB)
IEA
GO:0003677
G5E9C0 (UniProtKB)
IEA
GO:0005634
G5E9C0 (UniProtKB)
IDA
GO:0005730
G5E9C0 (UniProtKB)
IDA
GO:0003677
Q9HB58 (UniProtKB)
IEA
GO:0004871
Q9HB58 (UniProtKB)
TAS
GO:0005634
Q9HB58 (UniProtKB)
IDA
GO:0005730
Q9HB58 (UniProtKB)
IDA
GO:0006351
Q9HB58 (UniProtKB)
IEA
GO:0006355
Q9HB58 (UniProtKB)
IEA
GO:0007165
Q9HB58 (UniProtKB)
IEA
GO:0008270
Q9HB58 (UniProtKB)
IEA
GO:0016032
Q9HB58 (UniProtKB)
IEA

可能调控 SP110基因的相关microRNA:     

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Hepatic venoocclusive disease with immunodeficiency 0.240271442 1 0 BeFree_CTD_human_ORPHANET
Chronic Lymphocytic Leukemia 0.124734064 5 1 GAD_GWASCAT
MYCOBACTERIUM TUBERCULOSIS, SUSCEPTIBILITY TO (finding) 0.12 0 0 CTD_human
Tuberculosis 0.010987159 14 0 BeFree_GAD_LHGDN
Hepatic Veno-Occlusive Disease 0.005991584 3 0 BeFree_LHGDN
Infection 0.0054487 2 0 LHGDN
Hepatitis C 0.004734064 2 0 GAD
Tuberculosis, Pulmonary 0.003724241 6 0 BeFree_GAD
Graft-vs-Host Disease 0.002367032 1 0 GAD
Immunologic Deficiency Syndromes 0.000542884 2 0 BeFree

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