SLC22A18 (solute carrier family 22 member 18)

symbol:
SLC22A18
locus group:
protein-coding gene
location:
11p15.4
gene_family:
Solute carriers
alias symbol:
BWR1A|TSSC5|ITM
alias name:
organic cation transporter like 2|…
entrez id:
5002
ensembl gene id:
ENSG00000110628
ucsc gene id:
uc001lwx.3
refseq accession:
NM_183233
hgnc_id:
HGNC:10964
approved reserved:
1998-06-05
11p15.4
基因染色体位置图

SLC22A18(溶质载体家族22成员18)属于SLC22基因家族,该家族编码跨膜转运蛋白,主要负责转运有机阳离子、阴离子和两性离子等小分子物质。SLC22A18定位于11号染色体(11p15.5),其编码的蛋白质可能参与细胞内外物质的转运,但具体底物尚未完全明确。该基因在多种组织中表达,包括肾脏、肝脏和胎盘等。SLC22A18位于基因组印记区域(genomic imprinting region),意味着其表达受亲本来源影响,通常仅从母源染色体表达。SLC22A18的突变或表达异常可能与某些疾病相关,如Beckwith-Wiedemann综合征(一种过度生长障碍疾病)和某些癌症(如肺癌和乳腺癌),因其位于11p15.5这一肿瘤相关区域。基因过表达可能影响细胞增殖或凋亡,而表达降低可能导致转运功能受损,影响相关代谢途径。SLC22A18所属的SLC22基因家族成员均具有12个预测的跨膜结构域(transmembrane domains),负责多种内源性和外源性物质的转运。目前对该基因功能的了解仍有限,需要更多研究揭示其具体生物学作用和疾病关联机制。

This gene is one of several tumor-suppressing subtransferable fragments located in the imprinted gene domain of 11p15.5, an important tumor-suppressor gene region. Alterations in this region have been associated with the Beckwith-Wiedemann syndrome, Wilms tumor, rhabdomyosarcoma, adrenocortical carcinoma, and lung, ovarian, and breast cancer. This gene is imprinted, with preferential expression from the maternal allele. Mutations in this gene have been found in Wilms' tumor and lung cancer. This protein may act as a transporter of organic cations, and have a role in the transport of chloroquine and quinidine-related compounds in kidney. Two alternatively spliced transcript variants encoding the same protein have been described. [provided by RefSeq, Oct 2010]

这个基因位于11p15.5的印记基因领域,一个重要的肿瘤抑制基因区几个肿瘤抑制subtransferable片段中的一个。在这一区域的改变已与贝克威思-威德曼综合征,肾母细胞瘤,横纹肌肉瘤,肾上腺皮质癌和肺癌,卵巢癌和乳腺癌有关。该基因印迹,以从母体等位基因优先表达。在这个基因的突变已经在肾母细胞瘤和肺癌被发现。这种蛋白质可以充当有机阳离子转运,并在氯喹和肾奎尼丁相关化合物的输送的作用。两个编码相同蛋白质可变剪接转录物变体已有描述。 [由RefSeq的,2010年10月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
SLC22A18基因的碱基突变:           仅显示部分snp
rs120738       rs120738       rs120739       rs120739       rs120740       rs120740       rs365605       rs365605       rs366696       rs366696       rs367035       rs367035       rs389646       rs389646       rs390266       rs390266       rs392212      

SLC22A18基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CTGATCAAGGCTGTCTCCA
59
AGCAGTGGTTGTACAGAGG
59
ATCTTGCTTACCTACGTGCT
59
TTTCCGAGACAGGTATGGC
60
GAGGATCTTCCTGGTGAAGG
60
GAACATGACCATGAAGAGCC
59
TCTTGCTTACCTACGTGCT
59
TTTCCGAGACAGGTATGGC
60
TGATCAAGGCTGTCTCCAC
59
GAGCAGTGGTTGTACAGAG
58
AGGATCTTCCTGGTGAAGG
58
AGAACATGACCATGAAGAGC
58
TGATCAAGGCTGTCTCCAC
59
AGCAGTGGTTGTACAGAGG
59
GATCTTCCTGGTGAAGGTG
58
GGAGAACATGACCATGAAGAG
59
CTTGCTTACCTACGTGCTG
59
TTTCCGAGACAGGTATGGC
60
      尚未收录相关数据

SLC22A18基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

SLC22A18基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005215
A0A024RCG2 (UniProtKB)
IEA
GO:0016021
A0A024RCG2 (UniProtKB)
IEA
GO:0055085
A0A024RCG2 (UniProtKB)
IEA
GO:0005215
A0A0J9YWM3 (UniProtKB)
IEA
GO:0016021
A0A0J9YWM3 (UniProtKB)
IEA
GO:0055085
A0A0J9YWM3 (UniProtKB)
IEA
GO:0016021
A0A0J9YXN9 (UniProtKB)
IEA
GO:0016021
E9PMN7 (UniProtKB)
IEA
GO:0005215
E9PRM7 (UniProtKB)
IEA
GO:0016021
E9PRM7 (UniProtKB)
IEA
GO:0055085
E9PRM7 (UniProtKB)
IEA
GO:0005635
Q96BI1 (UniProtKB)
IDA
GO:0005737
Q96BI1 (UniProtKB)
IDA
GO:0005886
Q96BI1 (UniProtKB)
TAS
GO:0006855
Q96BI1 (UniProtKB)
IEA
GO:0007588
Q96BI1 (UniProtKB)
NAS
GO:0015238
Q96BI1 (UniProtKB)
IDA
GO:0015293
Q96BI1 (UniProtKB)
IEA
GO:0015307
Q96BI1 (UniProtKB)
TAS
GO:0015695
Q96BI1 (UniProtKB)
NAS
GO:0015893
Q96BI1 (UniProtKB)
IDA
GO:0016020
Q96BI1 (UniProtKB)
IDA
GO:0016021
Q96BI1 (UniProtKB)
NAS
GO:0016021
Q96BI1 (UniProtKB)
NAS
GO:0016324
Q96BI1 (UniProtKB)
IDA
GO:0031625
Q96BI1 (UniProtKB)
IPI
GO:0046618
Q96BI1 (UniProtKB)
IEA

可能调控 SLC22A18基因的相关microRNA:     

BioGrid

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Carcinoma of lung 0.24 1 1 CLINVAR_UNIPROT
Mammary Neoplasms 0.123267234 3 0 BeFree_CTD_human_LHGDN
Breast adenocarcinoma 0.12 0 0 CLINVAR
Lung Neoplasms 0.12 0 0 CTD_human
Rhabdomyosarcoma 1 0.12 0 0 CTD_human
Alcoholic Intoxication, Chronic 0.002367032 1 0 GAD
Breast Carcinoma 0.001357209 5 0 BeFree
Malignant neoplasm of breast 0.001357209 5 0 BeFree
Glioma 0.001085767 4 0 BeFree
Adenocarcinoma 0.000814326 3 0 BeFree

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