SEZ6L2 (seizure related 6 homolog like 2)

symbol:
SEZ6L2
locus group:
protein-coding gene
location:
16p11.2
gene_family:
alias symbol:
PSK-1|FLJ90517
alias name:
type I transmembrane receptor (sei…
entrez id:
26470
ensembl gene id:
ENSG00000174938
ucsc gene id:
uc002dup.5
refseq accession:
NM_012410
hgnc_id:
HGNC:30844
approved reserved:
2004-07-12
16p11.2
基因染色体位置图

This gene encodes a seizure-related protein that is localized on the cell surface. The gene is located in a region of chromosome 16p11.2 that is thought to contain candidate genes for autism spectrum disorders (ASD), though there is no evidence directly implicating this gene in ASD. Increased expression of this gene has been found in lung cancers, and the protein is therefore considered to be a novel prognostic marker for lung cancer. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Aug 2011]

该基因编码是在细胞表面上的局部癫痫发作相关的蛋白。该基因位于被认为含有对自闭症候选基因(ASD)染色体16p11.2的一个区域,虽然没有证据直接牵连在ASD这种基因。该基因的表达增加已经在肺癌被发现,因此,该蛋白被认为是肺癌的新的预后标志物。这个基因的选择性剪接的结果在多个转录变体。 [由RefSeq的,2011年8月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
SEZ6L2基因的碱基突变:           仅显示部分snp
rs11344       rs7189550       rs7189750       rs7498372       rs77905673       rs78964414       rs112477079       rs115351766       rs116806822       rs140635603       rs141266563       rs144993909       rs146783719       rs147565326       rs148255395       rs148270044       rs148281484      

SEZ6L2基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CTTCGATTTGAAGCCATGTG
58
TTCCCGCACATTCAATATCTC
59
CTTTGAGCTTATCGGCGAG
59
CTCATAGGCAACTTTGCAGAG
59
TATGATTCGGACATGGACG
57
CCTCAAAGGCTTCAAATCG
57
CTTTGAGCTTATCGGCGAG
59
CTCATAGGCAACTTTGCAGAG
59
CTTTGAGCTTATCGGCGAG
59
CTCATAGGCAACTTTGCAGAG
59
TGGCAGCCAGATTACTTAGAG
60
CGATCAGATCCCTGGATCC
59
GCTATGAGGGCTTTGAGCT
60
TCTGGGTCACTTTGCAGAG
60
AGAAGGACAAGTCCTTCGG
59
GGAGGTAGGCCTGATAGTG
59
CTTTGAGCTTATCGGCGAG
59
CTCATAGGCAACTTTGCAGAG
59
GTTGAGATATTGAATGTGCGG
57
GAAACTGCAGTGTGAGGTC
58
      尚未收录相关数据

SEZ6L2基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

SEZ6L2基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005783
A0A087WYL5 (UniProtKB)
IEA
GO:0008344
A0A087WYL5 (UniProtKB)
IEA
GO:0016021
A0A087WYL5 (UniProtKB)
IEA
GO:0021680
A0A087WYL5 (UniProtKB)
IEA
GO:0043025
A0A087WYL5 (UniProtKB)
IEA
GO:0060074
A0A087WYL5 (UniProtKB)
IEA
GO:0090036
A0A087WYL5 (UniProtKB)
IEA
GO:0005789
Q6UXD5 (UniProtKB)
IEA
GO:0005886
Q6UXD5 (UniProtKB)
IEA
GO:0016021
Q6UXD5 (UniProtKB)
IEA

可能调控 SEZ6L2基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Autistic Disorder 0.122638474 1 0 BeFree_CTD_human_GAD
Stomach Carcinoma 0.000542884 2 0 BeFree
Malignant neoplasm of stomach 0.000542884 2 0 BeFree
Small cell carcinoma of lung 0.000271442 1 0 BeFree
Neuropil Threads 0.000271442 1 0 BeFree
Malignant neoplasm of lung 0.000271442 1 0 BeFree
Senile Plaques 0.000271442 1 0 BeFree
Dementia 0.000271442 1 0 BeFree
Atrial Septal Defects 0.000271442 1 0 BeFree
Klinefelter Syndrome 0.000271442 1 0 BeFree

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