SBDS (SBDS ribosome maturation factor)

symbol:
SBDS
locus group:
protein-coding gene
location:
7q11.21
gene_family:
alias symbol:
CGI-97|FLJ10917|SDS|SWDS|SDO1
alias name:
None
entrez id:
51119
ensembl gene id:
ENSG00000126524
ucsc gene id:
uc003tvm.2
refseq accession:
NM_016038
hgnc_id:
HGNC:19440
approved reserved:
2003-07-02
7q11.21
基因染色体位置图

This gene encodes a member of a highly conserved protein family that exists from archaea to vertebrates and plants. The encoded protein may function in RNA metabolism. Mutations within this gene are associated with Shwachman-Bodian-Diamond syndrome. An alternative transcript has been described, but its biological nature has not been determined. This gene has a closely linked pseudogene that is distally located. [provided by RefSeq, Jul 2008]

这个基因编码高度保守的蛋白家族,从古脊椎动物和植物中存在的成员。所编码的蛋白质可在RNA的代谢作用。这种基因突变在与Shwachman - 迪恩 - 钻石综合征。一种替代转录进行了说明,但其生物性质尚未确定。该基因有密切的联系假即位于远端。 [由RefSeq的,2008年7月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
SBDS基因的碱基突变:           仅显示部分snp
rs1053589       rs1053591       rs1053594       rs1053599       rs1053607       rs1061695       rs3204901       rs3807433       rs4308614       rs4718437       rs4718438       rs6957031       rs6958030       rs6961020       rs6969553       rs6971508       rs7778881      

SBDS基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CACCGTGATCCTTATTGAGAG
58
TTATCACTTCCAAAGCCTGC
58
ACACCGTGATCCTTATTGAG
57
TATCACTTCCAAAGCCTGC
57
CACCGTGATCCTTATTGAGAG
58
TATCACTTCCAAAGCCTGC
57
      尚未收录相关数据

SBDS基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

SBDS基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0042256
A0A087X020 (UniProtKB)
IEA
GO:0042256
F8WE72 (UniProtKB)
IEA
GO:0000922
Q9Y3A5 (UniProtKB)
IDA
GO:0000922
Q9Y3A5 (UniProtKB)
IDA
GO:0001833
Q9Y3A5 (UniProtKB)
IEA
GO:0005515
Q9Y3A5 (UniProtKB)
IPI
GO:0005515
Q9Y3A5 (UniProtKB)
IPI
GO:0005515
Q9Y3A5 (UniProtKB)
IPI
GO:0005634
Q9Y3A5 (UniProtKB)
IDA
GO:0005634
Q9Y3A5 (UniProtKB)
IDA
GO:0005634
Q9Y3A5 (UniProtKB)
IDA
GO:0005654
Q9Y3A5 (UniProtKB)
IEA
GO:0005730
Q9Y3A5 (UniProtKB)
IDA
GO:0005730
Q9Y3A5 (UniProtKB)
IDA
GO:0005737
Q9Y3A5 (UniProtKB)
IDA
GO:0005737
Q9Y3A5 (UniProtKB)
IDA
GO:0005737
Q9Y3A5 (UniProtKB)
IDA
GO:0006364
Q9Y3A5 (UniProtKB)
IMP
GO:0007052
Q9Y3A5 (UniProtKB)
IDA
GO:0008017
Q9Y3A5 (UniProtKB)
IDA
GO:0008283
Q9Y3A5 (UniProtKB)
IMP
GO:0019843
Q9Y3A5 (UniProtKB)
IDA
GO:0030282
Q9Y3A5 (UniProtKB)
IMP
GO:0030595
Q9Y3A5 (UniProtKB)
IDA
GO:0042256
Q9Y3A5 (UniProtKB)
IDA
GO:0043022
Q9Y3A5 (UniProtKB)
IDA
GO:0044822
Q9Y3A5 (UniProtKB)
IDA
GO:0048539
Q9Y3A5 (UniProtKB)
IMP

可能调控 SBDS基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Shwachman syndrome 0.492757768 47 11 BeFree_CLINVAR_CTD_human_ORPHANET_UNIPROT
Aplastic anemia, idiopathic 0.12 0 0 ORPHANET
APLASTIC ANEMIA, SUSCEPTIBILITY TO (finding) 0.12 0 1 CLINVAR
Dwarfism 0.00434307 16 0 BeFree
Anemia, Diamond-Blackfan 0.002995792 2 0 BeFree_LHGDN
Aplastic Anemia 0.00272435 1 0 LHGDN
Dyskeratosis Congenita 0.00272435 1 0 LHGDN
Obesity 0.002442977 9 0 BeFree
Hereditary spherocytosis 0.001357209 5 0 BeFree
Overweight 0.001357209 5 0 BeFree

联系方式

山东省济南市 高新区 崇华路359号 三庆世纪财富中心C1115室

电话: 0531-88819269

E-mail: product@genelibs.com

微信公众号

关注微信订阅号,实时查看信息,关注医学生物学动态。