SART1 (spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP)

symbol:
SART1
locus group:
protein-coding gene
location:
11q13.1
gene_family:
alias symbol:
Ara1|Snu66|SNRNP110|HAF
alias name:
small nuclear ribonucleoprotein 11…
entrez id:
9092
ensembl gene id:
ENSG00000175467
ucsc gene id:
uc001ogl.4
refseq accession:
NM_005146
hgnc_id:
HGNC:10538
approved reserved:
1999-01-29
11q13.1
基因染色体位置图

This gene encodes two proteins, the SART1(800) protein expressed in the nucleus of the majority of proliferating cells, and the SART1(259) protein expressed in the cytosol of epithelial cancers. The SART1(259) protein is translated by the mechanism of -1 frameshifting during posttranscriptional regulation; its full-length sequence is not published yet. The two encoded proteins are thought to be involved in the regulation of proliferation. Both proteins have tumor-rejection antigens. The SART1(259) protein possesses tumor epitopes capable of inducing HLA-A2402-restricted cytotoxic T lymphocytes in cancer patients. This SART1(259) antigen may be useful in specific immunotherapy for cancer patients and may serve as a paradigmatic tool for the diagnosis and treatment of patients with atopy. The SART1(259) protein is found to be essential for the recruitment of the tri-snRNP to the pre-spliceosome in the spliceosome assembly pathway. [provided by RefSeq, Jul 2008]

这个基因编码两种蛋白,在大多数增殖细胞的细胞核表达的SART1(800)蛋白质,并在上皮癌的胞质溶胶中表达的SART1(259)的蛋白质。该SART1(259)蛋白质是由转录后调节时-1移码的机制转换;其全长序列尚未发布。两种编码的蛋白质被认为是参与细胞增殖的调节。这两种蛋白质有肿瘤排斥抗原。所述SART1(259)蛋白具有能在癌症患者中诱导的HLA-A2402-限制的细胞毒T淋巴细胞的肿瘤抗原表位。此SART1(259)抗原可以是在癌症患者特异性免疫有用,可作为用于治疗患有特应性的诊断和治疗一个例证工具。所述SART1(259)的蛋白质被发现是对三核蛋白的募集在剪接组件通路预剪接必不可少的。 [由RefSeq的,2008年7月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
SART1基因的碱基突变:           仅显示部分snp
rs491973       rs493899       rs501353       rs542332       rs543952       rs550435       rs552130       rs556643       rs586921       rs593525       rs622779       rs642293       rs649000       rs649066       rs660118       rs679581       rs688862      

SART1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GGAGACTAACAAACTCCGG
58
CTTGATGGCATTAACCTCCA
58
TTCTTCTTGTTCCAGCTGC
58
CCGGAGTTTGTTAGTCTCC
58
CTGTTATTATACACCTTGTGGGC
60
TCATCTTCTTCAGGAGCGC
60
GGACTTTGGTTCCAGACTG
58
GATGTCCATGTTCTCCACTC
58
TCGAATACGTGGATGAGACG
60
TCATCTTCTTCAGGAGCGC
60
GAGGATAAGATGGCCATCGA
59
GTCCTTCTCCTTGAAGTCCT
59
AATACGTGGATGAGACGGG
59
TCATCTTCTTCAGGAGCGC
60
AGGAGACTAACAAACTCCGG
59
GATGACATCAGCTGTCACG
59
GACCCTAGGAGAGGATGAC
58
GTAACTTGGCCCTCTTCTC
58
GCAGACTTTGTGTTTGGGA
59
TTTCCAGACAGACAAGAGGAG
60
      尚未收录相关数据

SART1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

SART1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0000398
E9PQI8 (UniProtKB)
IEA
GO:0000387
O43290 (UniProtKB)
TAS
GO:0000398
O43290 (UniProtKB)
IC
GO:0000398
O43290 (UniProtKB)
TAS
GO:0000481
O43290 (UniProtKB)
IBA
GO:0005515
O43290 (UniProtKB)
IPI
GO:0005515
O43290 (UniProtKB)
IPI
GO:0005515
O43290 (UniProtKB)
IPI
GO:0005515
O43290 (UniProtKB)
IPI
GO:0005515
O43290 (UniProtKB)
IPI
GO:0005515
O43290 (UniProtKB)
IPI
GO:0005515
O43290 (UniProtKB)
IPI
GO:0005654
O43290 (UniProtKB)
IDA
GO:0005654
O43290 (UniProtKB)
IDA
GO:0005654
O43290 (UniProtKB)
TAS
GO:0005654
O43290 (UniProtKB)
TAS
GO:0005737
O43290 (UniProtKB)
TAS
GO:0005794
O43290 (UniProtKB)
IDA
GO:0005829
O43290 (UniProtKB)
TAS
GO:0007050
O43290 (UniProtKB)
NAS
GO:0015030
O43290 (UniProtKB)
IDA
GO:0044822
O43290 (UniProtKB)
IDA
GO:0044822
O43290 (UniProtKB)
IDA
GO:0045292
O43290 (UniProtKB)
IBA
GO:0045585
O43290 (UniProtKB)
IDA
GO:0046540
O43290 (UniProtKB)
IBA
GO:0071013
O43290 (UniProtKB)
IDA
GO:0097193
O43290 (UniProtKB)
NAS

可能调控 SART1基因的相关microRNA:     

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Malignant neoplasm of prostate 0.002367032 1 0 GAD
Breast Carcinoma 0.000814326 3 1 BeFree
Malignant neoplasm of breast 0.000814326 3 1 BeFree
Squamous cell carcinoma 0.000271442 1 0 BeFree
Colorectal Carcinoma 0.000271442 1 0 BeFree
Glioblastoma 0.000271442 1 1 BeFree
Colorectal Cancer 0.000271442 1 0 BeFree

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