S100A13 (S100 calcium binding protein A13)

symbol:
S100A13
locus group:
protein-coding gene
location:
1q21.3
gene_family:
S100 calcium binding proteins
alias symbol:
None
alias name:
None
entrez id:
6284
ensembl gene id:
ENSG00000189171
ucsc gene id:
uc057lce.1
refseq accession:
NM_005979
hgnc_id:
HGNC:10490
approved reserved:
1997-10-30
1q21.3
基因染色体位置图

S100A13是S100钙结合蛋白家族(S100 family)的成员之一,该家族是一类小分子量(10-12 kDa)的钙结合蛋白,通常以二聚体形式存在,参与细胞内外的多种生物学过程,如细胞增殖、分化、炎症反应和肿瘤发生。S100A13基因位于人类染色体1q21.3区域,编码的蛋白具有EF-hand结构域(一种常见的钙离子结合模体),可通过结合钙离子调节其功能。S100A13的主要作用位点包括细胞质和细胞外空间,它参与非经典分泌途径(unconventional secretion),协助其他蛋白(如成纤维细胞生长因子1,FGF1)的分泌。此外,S100A13在应激条件下(如缺氧或氧化应激)可能促进细胞凋亡或存活信号的传递。突变或异常表达可能影响其钙结合能力或蛋白相互作用,导致功能紊乱。研究表明,S100A13在多种疾病中发挥作用,如肿瘤(如乳腺癌、胶质瘤)、心血管疾病和炎症性疾病。其过表达可能促进肿瘤血管生成(通过增强FGF1的分泌)或加剧炎症反应,而低表达可能影响组织修复或应激响应。S100A13与S100家族其他成员共享钙调节特性,但功能上具有独特性,例如其参与非经典分泌途径的特点。该基因的异常表达还可能通过调控下游信号通路(如MAPK或NF-κB)影响其他基因的表达或细胞行为。

The protein encoded by this gene is a member of the S100 family of proteins containing 2 EF-hand calcium-binding motifs. S100 proteins are localized in the cytoplasm and/or nucleus of a wide range of cells, and involved in the regulation of a number of cellular processes such as cell cycle progression and differentiation. S100 genes include at least 13 members which are located as a cluster on chromosome 1q21. This protein is widely expressed in various types of tissues with a high expression level in thyroid gland. In smooth muscle cells, this protein co-expresses with other family members in the nucleus and in stress fibers, suggesting diverse functions in signal transduction. Multiple alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]

由该基因编码的蛋白质是S100家族含有2 EF手钙结合基序的蛋白质的成员。 S100蛋白是局部在广泛的细胞的细胞质和/或细胞核,并参与了许多细胞过程的调控,如细胞周期进程和分化。 S100基因包括至少13名成员分别位于作为染色体1q21集群。这种蛋白广泛表达在各类与甲状腺高表达水平的组织。在平滑肌细胞中,这种蛋白质在细胞核和在应力纤维其他家庭成员共表达,信号转导提示各种功能。已发现了该基因编码的蛋白质相同的多个可变剪接转录变异体。 [由RefSeq的,2008年7月提供]

S100A13基因的碱基序列:[NCBI]
Loading Gene Browser...
S100A13基因的碱基突变:           仅显示部分snp
rs14094       rs1888115       rs3818632       rs5777875       rs6143429       rs6694006       rs9427340       rs9427347       rs11355590       rs11486163       rs11486164       rs28379831       rs28380060       rs28446042       rs28518786       rs28580554       rs28635401      

S100A13基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
ATCTGCTCAAGGATGTGGG
60
TCATTGAACTTGAGCTCCGA
60
ATCTGCTCAAGGATGTGGG
60
TCATTGAACTTGAGCTCCGA
60
ATCTGCTCAAGGATGTGGG
60
TCATTGAACTTGAGCTCCGA
60
ATCTGCTCAAGGATGTGGG
60
TCATTGAACTTGAGCTCCGA
60
ATCTGCTCAAGGATGTGGG
60
TCATTGAACTTGAGCTCCGA
60
ATCTGCTCAAGGATGTGGG
60
TCATTGAACTTGAGCTCCGA
60
CTTCAATCAGGAAGCCAGAG
58
CTCATCAACGTGTTCCACG
59
ATCTGCTCAAGGATGTGGG
60
CATTGAACTTGAGCTCCGAG
59
ATCTGCTCAAGGATGTGGG
60
CATTGAACTTGAGCTCCGAG
59
ATCTGCTCAAGGATGTGGG
60
CATTGAACTTGAGCTCCGAG
59
      尚未收录相关数据

S100A13基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

S100A13基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005507
Q99584 (UniProtKB)
IDA
GO:0005507
Q99584 (UniProtKB)
IDA
GO:0005509
Q99584 (UniProtKB)
IDA
GO:0005509
Q99584 (UniProtKB)
IDA
GO:0005515
Q99584 (UniProtKB)
IPI
GO:0005515
Q99584 (UniProtKB)
IPI
GO:0005515
Q99584 (UniProtKB)
IPI
GO:0005615
Q99584 (UniProtKB)
IDA
GO:0005634
Q99584 (UniProtKB)
IDA
GO:0005634
Q99584 (UniProtKB)
IDA
GO:0005737
Q99584 (UniProtKB)
IDA
GO:0005829
Q99584 (UniProtKB)
IDA
GO:0008270
Q99584 (UniProtKB)
IDA
GO:0008284
Q99584 (UniProtKB)
IEA
GO:0008289
Q99584 (UniProtKB)
IEA
GO:0008360
Q99584 (UniProtKB)
IEA
GO:0017134
Q99584 (UniProtKB)
IPI
GO:0042629
Q99584 (UniProtKB)
IEA
GO:0042803
Q99584 (UniProtKB)
IPI
GO:0042803
Q99584 (UniProtKB)
IPI
GO:0043123
Q99584 (UniProtKB)
IDA
GO:0043303
Q99584 (UniProtKB)
NAS
GO:0046688
Q99584 (UniProtKB)
IEA
GO:0048471
Q99584 (UniProtKB)
IDA
GO:0050663
Q99584 (UniProtKB)
IMP
GO:0050703
Q99584 (UniProtKB)
IDA
GO:0050786
Q99584 (UniProtKB)
IPI
GO:0051602
Q99584 (UniProtKB)
IEA
GO:0070062
Q99584 (UniProtKB)
IDA

可能调控 S100A13基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Astrocytoma 0.002995792 2 0 BeFree_LHGDN
Glioma 0.00272435 1 0 LHGDN
melanoma 0.000542884 2 0 BeFree
Carcinoma of lung 0.000542884 2 0 BeFree
Cutaneous Melanoma 0.000542884 2 0 BeFree
Neoplasm Metastasis 0.000542884 2 0 BeFree
Malignant neoplasm of lung 0.000542884 2 0 BeFree
Carcinoma, Papillary 0.000271442 1 0 BeFree
Angiogenic Switch 0.000271442 1 0 BeFree
Dental caries 0.000271442 1 0 BeFree

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