S100A11 (S100 calcium binding protein A11)

symbol:
S100A11
locus group:
protein-coding gene
location:
1q21.3
gene_family:
S100 calcium binding proteins|EF-hand domain containing
alias symbol:
S100C
alias name:
calgizzarin
entrez id:
6282
ensembl gene id:
ENSG00000163191
ucsc gene id:
uc001ezn.3
refseq accession:
NM_005620
hgnc_id:
HGNC:10488
approved reserved:
1997-10-30
1q21.3
基因染色体位置图

The protein encoded by this gene is a member of the S100 family of proteins containing 2 EF-hand calcium-binding motifs. S100 proteins are localized in the cytoplasm and/or nucleus of a wide range of cells, and involved in the regulation of a number of cellular processes such as cell cycle progression and differentiation. S100 genes include at least 13 members which are located as a cluster on chromosome 1q21. This protein may function in motility, invasion, and tubulin polymerization. Chromosomal rearrangements and altered expression of this gene have been implicated in tumor metastasis. [provided by RefSeq, Jul 2008]

由该基因编码的蛋白质是S100家族含有2 EF手钙结合基序的蛋白质的成员。 S100蛋白是局部在广泛的细胞的细胞质和/或细胞核,并参与了许多细胞过程的调控,如细胞周期进程和分化。 S100基因包括至少13名成员分别位于作为染色体1q21集群。这种蛋白可以以运动,侵袭和微管蛋白聚合起作用。染色体重排和该基因的改变的表达有牵连肿瘤转移。 [由RefSeq的,2008年7月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
S100A11基因的碱基突变:           仅显示部分snp
rs2999550       rs2999551       rs2999552       rs3007675       rs3007676       rs3007677       rs3088381       rs3122301       rs3122302       rs3122303       rs3811422       rs4631697       rs4634912       rs6694472       rs6702172       rs10639752       rs11550578      

S100A11基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TTCACAAAGAACCAGAAGGA
57
AATCTAGCTGACCATCACTG
57
GGAGTTGATGAGAAACAGGC
59
CCTTCTGGTTCTTTGTGAAGG
59
TTCACAAAGAACCAGAAGGA
57
AATCTAGCTGACCATCACTG
57
GAGTTGATGAGAAACAGGCA
58
CCTTCTGGTTCTTTGTGAAGG
59
TCACAAAGAACCAGAAGGAC
58
AAATCTAGCTGACCATCACTG
58
TCACAAAGAACCAGAAGGAC
58
AAATCTAGCTGACCATCACTG
58
GGAGTTGATGAGAAACAGGC
59
CTTCTGGTTCTTTGTGAAGGC
60
TCACAAAGAACCAGAAGGAC
58
AATCTAGCTGACCATCACTG
57
TCACAAAGAACCAGAAGGAC
58
AATCTAGCTGACCATCACTG
57
转录因子
影响基因
影响类型
参考文献链接(PubMed)
STAT3
S100A11
Activation

S100A11基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

S100A11基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0001726
P31949 (UniProtKB)
IDA
GO:0005509
P31949 (UniProtKB)
IEA
GO:0005515
P31949 (UniProtKB)
IPI
GO:0005615
P31949 (UniProtKB)
IDA
GO:0005615
P31949 (UniProtKB)
IDA
GO:0005634
P31949 (UniProtKB)
IDA
GO:0005737
P31949 (UniProtKB)
IDA
GO:0005737
P31949 (UniProtKB)
TAS
GO:0007165
P31949 (UniProtKB)
TAS
GO:0008156
P31949 (UniProtKB)
TAS
GO:0008285
P31949 (UniProtKB)
TAS
GO:0042803
P31949 (UniProtKB)
IDA
GO:0044548
P31949 (UniProtKB)
IPI
GO:0048306
P31949 (UniProtKB)
IDA
GO:0070062
P31949 (UniProtKB)
IDA
GO:0070062
P31949 (UniProtKB)
IDA
GO:0070062
P31949 (UniProtKB)
IDA

可能调控 S100A11基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Degenerative polyarthritis 0.003267234 2 0 BeFree_LHGDN
Neoplasm Metastasis 0.003267234 3 0 BeFree_LHGDN
Liver carcinoma 0.002995792 2 0 BeFree_LHGDN
Fibroid Tumor 0.002995792 1 0 BeFree_LHGDN
Dermatitis, Atopic 0.002995792 2 0 BeFree_LHGDN
Lung Neoplasms 0.00272435 1 0 LHGDN
Bladder Neoplasm 0.00272435 1 0 LHGDN
Colorectal Neoplasms 0.00272435 1 0 LHGDN
Stomach Neoplasms 0.00272435 1 0 LHGDN
Tobacco Use Disorder 0.002367032 1 0 GAD

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