RPS18 (ribosomal protein S18)

symbol:
RPS18
locus group:
protein-coding gene
location:
6p21.32
gene_family:
S ribosomal proteins
alias symbol:
KE3|KE-3|HKE3|S18
alias name:
None
entrez id:
6222
ensembl gene id:
ENSG00000231500
ucsc gene id:
uc063zkv.1
refseq accession:
NM_022551
hgnc_id:
HGNC:10401
approved reserved:
1993-06-23
6p21.32
基因染色体位置图

RPS18(核糖体蛋白S18)是核糖体小亚基的组成蛋白之一,属于RPS基因家族(核糖体蛋白家族),该家族成员均为核糖体的结构组分,参与蛋白质翻译过程。RPS18在核糖体组装和mRNA解码中起关键作用,其表达产物与rRNA结合形成40S小亚基,确保翻译起始和延伸的准确性。主要作用位点为细胞质中的核糖体复合体。若RPS18发生突变(如错义突变或缺失),可能导致核糖体功能异常,引发核糖体病(ribosomopathy),典型表现为发育迟缓、贫血或癌症易感性(如5q-综合征)。该基因与迪亚蒙德-布莱克范贫血(Diamond-Blackfan anemia,DBA)相关,患者常伴有RPS家族基因突变导致的红细胞生成障碍。当RPS18过表达时,可能破坏核糖体亚基平衡,触发p53依赖的细胞周期阻滞(核糖体应激反应);而低表达则导致翻译效率下降,影响细胞增殖。RPS基因家族的共性包括:高度保守性(从酵母到人类)、管家基因特性(持续基础表达)以及部分成员具备核糖体外功能(如调控凋亡)。需注意术语"核糖体应激"(ribosomal stress)指核糖体失衡激活的细胞应激通路,"解码"(decoding)特指核糖体读取mRNA密码子的过程。目前中文文献对"ribosomopathy"尚无统一译法,多直译为核糖体病。

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S13P family of ribosomal proteins. It is located in the cytoplasm. The gene product of the E. coli ortholog (ribosomal protein S13) is involved in the binding of fMet-tRNA, and thus, in the initiation of translation. This gene is an ortholog of mouse Ke3. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

核糖体,催化蛋白质合成的细胞器,由一个小40S亚基和60S大亚基。一起这些亚基组成的4 RNA种类和大约80结构不同的蛋白质。该基因编码一种核糖体蛋白,它是40S亚基的一个组成部分。该蛋白属于S13P家族核糖体的蛋白质。它位于细胞质中。大肠杆菌直向同源物(核糖体蛋白S13)基因产物参与fMet酰tRNA的结合,因此,在翻译起始。这个基因小鼠KE3的同源物。作为典型编码核糖体蛋白的基因,有该基因通过基因组分散的多个经处理的假基因。 [由RefSeq的,2008年7月提供]

RPS18基因的碱基序列:[NCBI]
Loading Gene Browser...
RPS18基因的碱基突变:           仅显示部分snp
rs463302       rs464367       rs2231258       rs9368759       rs11302500       rs61742768       rs72654475       rs72654476       rs72654477       rs72654478       rs72654479       rs72654480       rs72654481       rs72654482       rs72654483       rs72654484       rs111604602      

RPS18基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GACTGGTTCTTGAACAGACAG
59
GACCATTGGCTAGGACCTG
60
CATGTGGTGTTGAGGAAAGC
60
TGATCACACGTTCCACCTC
60
TGCAGCCATGTCTCTAGTG
60
CACATGAGCATATCTTCGGC
59
CACTGCCATTAAGGGTGTG
59
TCATCCTCAGTGAGTTCTCC
59
CCATTATGCAGAATCCACGC
60
GACCATTGGCTAGGACCTG
60
TTGCGAGTACTCAACACCA
59
GAAACCCTGTCTCTACTTAATGG
59
TGCAGCCATGTCTCTAGTG
60
CACATGAGCATATCTTCGGC
59
CACTGCCATTAAGGGTGTG
59
TCATCCTCAGTGAGTTCTCC
59
CATGTGGTGTTGAGGAAAGC
59
TGATCACACGTTCCACCTC
59
CTGAGGATGAGGTGGAACG
60
GTCTGTTCAAGAACCAGTCTG
59
      尚未收录相关数据

RPS18基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

RPS18基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0003723
J3JS69 (UniProtKB)
IEA
GO:0003735
J3JS69 (UniProtKB)
IEA
GO:0005581
J3JS69 (UniProtKB)
IEA
GO:0005840
J3JS69 (UniProtKB)
IEA
GO:0006412
J3JS69 (UniProtKB)
IEA
GO:0000184
P62269 (UniProtKB)
TAS
GO:0003735
P62269 (UniProtKB)
IEA
GO:0005515
P62269 (UniProtKB)
IPI
GO:0005634
P62269 (UniProtKB)
IDA
GO:0005634
P62269 (UniProtKB)
IDA
GO:0005654
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005829
P62269 (UniProtKB)
TAS
GO:0005840
P62269 (UniProtKB)
NAS
GO:0005925
P62269 (UniProtKB)
IDA
GO:0006364
P62269 (UniProtKB)
TAS
GO:0006412
P62269 (UniProtKB)
IBA
GO:0006412
P62269 (UniProtKB)
IC
GO:0006412
P62269 (UniProtKB)
IC
GO:0006412
P62269 (UniProtKB)
IC
GO:0006413
P62269 (UniProtKB)
TAS
GO:0006614
P62269 (UniProtKB)
TAS
GO:0015935
P62269 (UniProtKB)
IDA
GO:0016020
P62269 (UniProtKB)
IDA
GO:0019083
P62269 (UniProtKB)
TAS
GO:0019843
P62269 (UniProtKB)
IEA
GO:0022627
P62269 (UniProtKB)
IDA
GO:0022627
P62269 (UniProtKB)
IDA
GO:0042254
P62269 (UniProtKB)
IBA
GO:0044822
P62269 (UniProtKB)
IDA
GO:0044822
P62269 (UniProtKB)
IDA
GO:0070062
P62269 (UniProtKB)
IDA
GO:0070062
P62269 (UniProtKB)
IDA
GO:0070062
P62269 (UniProtKB)
IDA

可能调控 RPS18基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Lupus Erythematosus, Systemic 0.002367032 1 0 GAD
Colon Carcinoma 0.000542884 2 0 BeFree
Malignant tumor of colon 0.000542884 2 0 BeFree
Keloid 0.000271442 1 0 BeFree
Colorectal Cancer 0.000271442 1 0 BeFree
Colorectal Carcinoma 0.000271442 1 0 BeFree

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