RPL3 (ribosomal protein L3)

symbol:
RPL3
locus group:
protein-coding gene
location:
22q13.1
gene_family:
L ribosomal proteins
alias symbol:
L3
alias name:
None
entrez id:
6122
ensembl gene id:
ENSG00000100316
ucsc gene id:
uc003axi.4
refseq accession:
NM_000967
hgnc_id:
HGNC:10332
approved reserved:
1990-07-03
22q13.1
基因染色体位置图

RPL3(核糖体蛋白L3)是核糖体大亚基的组成蛋白之一,属于RPL基因家族(核糖体蛋白家族),该家族成员均参与核糖体组装及蛋白质翻译过程。RPL3在细胞质中与rRNA结合,形成60S核糖体亚基,其核心功能是维持核糖体结构稳定性并催化肽键形成(翻译延伸阶段的关键步骤)。该基因表达产物具有高度保守性,其突变可能导致核糖体组装异常,引发核糖体病(如Diamond-Blackfan贫血),表现为造血功能障碍或发育迟缓。研究发现RPL3与p53通路相互作用,其低表达会激活p53依赖的细胞周期阻滞,抑制肿瘤生长;而过表达可能通过增强蛋白质合成促进癌细胞增殖。在结直肠癌和乳腺癌中常见RPL3拷贝数增加,与化疗耐药性相关。RPL家族共性包括:均含碱性氨基酸结构域以结合rRNA,多数定位于核仁参与核糖体前体加工,且表达水平受mTOR信号通路调控。若RPL3表达异常(如敲除实验),会导致核糖体应激反应(ribosomal stress),触发核仁应激通路,影响细胞增殖或凋亡。此外,RPL3单核苷酸多态性(SNP)可能与神经退行性疾病风险相关,但机制尚不明确。专业术语解释:核糖体(ribosome)—蛋白质合成工厂;核糖体病(ribosomopathy)—核糖体功能缺陷导致的疾病;mTOR—调控细胞生长的关键激酶。

Ribosomes, the complexes that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L3P family of ribosomal proteins and it is located in the cytoplasm. The protein can bind to the HIV-1 TAR mRNA, and it has been suggested that the protein contributes to tat-mediated transactivation. This gene is co-transcribed with several small nucleolar RNA genes, which are located in several of this gene's introns. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

核糖体,催化合成蛋白质复合物,由一个小40S亚基和60S大亚基。一起这些亚基组成的4 RNA种类和大约80结构不同的蛋白质。该基因编码一种核糖体蛋白,它是60S亚基的一个组成部分。该蛋白属于L3P家族核糖体蛋白,它是位于细胞质中。蛋白质可以结合到HIV-1的TAR的mRNA,并且它已经表明该蛋白质有助于达介导的反式激活。该基因共同转录与几个核仁小分子RNA基因,分别位于几个这种基因的内含子。备用转录剪接变体,编码不同同种型,已经表征。作为典型编码核糖体蛋白的基因,有该基因通过基因组分散的多个经处理的假基因。 [由RefSeq的,2008年7月提供]

RPL3基因的碱基序列:[NCBI]
Loading Gene Browser...
RPL3基因的碱基突变:           仅显示部分snp
rs6509       rs137623       rs470080       rs470081       rs738331       rs1569498       rs2007418       rs2072872       rs5995709       rs9611144       rs11266894       rs11547987       rs11547999       rs11548023       rs12484030       rs61737929       rs71319030      

RPL3基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TCGAGAGGCTTGTGAAGAG
59
GAACTTTCTGTGAGACTGCA
58
AAGAAAGCATTCATGGGACC
58
ATTAAGCTCCTTCTTCCTTTGC
59
TCGAGAGGCTTGTGAAGAG
59
AGAACTTTCTGTGAGAGGCC
59
CTGAGATCAACAAGAAGCAGG
59
GTATCCCAAGGTCAGAGCA
58
AGATTTATAAGATTGGCCAGGG
58
GGCATTGTTCTTGATCAGC
57
AGCTTCCCTAAGGATGACC
58
CTTGTTCACCTTGGATCCC
58
TTGTCATGCTGAAAGGCTG
58
TCAATCTTCTCCAGAGCCC
58
AAGTCATCCGTGTCATTGC
58
ACCTGGATCTCCATCAGGT
59
ATTTGATGGCGTGATGTCTC
58
GAAGCTCTTCACCTTCCCA
59
TCGAGAGGCTTGTGAAGAG
59
AACTTTCTGTGAGACTGCAG
58
转录因子
影响基因
影响类型
参考文献链接(PubMed)
KHSRP
RPL3
Unknown
NPM1
RPL3
Unknown

RPL3基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

RPL3基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0003735
B5MCW2 (UniProtKB)
IEA
GO:0005730
B5MCW2 (UniProtKB)
IDA
GO:0005737
B5MCW2 (UniProtKB)
IDA
GO:0005840
B5MCW2 (UniProtKB)
IEA
GO:0006412
B5MCW2 (UniProtKB)
IEA
GO:0003735
F8WCR1 (UniProtKB)
IEA
GO:0005840
F8WCR1 (UniProtKB)
IEA
GO:0006412
F8WCR1 (UniProtKB)
IEA
GO:0003735
G5E9G0 (UniProtKB)
IEA
GO:0005654
G5E9G0 (UniProtKB)
IDA
GO:0005730
G5E9G0 (UniProtKB)
IDA
GO:0005737
G5E9G0 (UniProtKB)
IDA
GO:0005840
G5E9G0 (UniProtKB)
IEA
GO:0006412
G5E9G0 (UniProtKB)
IEA
GO:0003735
H7C3M2 (UniProtKB)
IEA
GO:0005840
H7C3M2 (UniProtKB)
IEA
GO:0006412
H7C3M2 (UniProtKB)
IEA
GO:0003735
H7C422 (UniProtKB)
IEA
GO:0005730
H7C422 (UniProtKB)
IDA
GO:0005737
H7C422 (UniProtKB)
IDA
GO:0005840
H7C422 (UniProtKB)
IEA
GO:0006412
H7C422 (UniProtKB)
IEA
GO:0000027
P39023 (UniProtKB)
IBA
GO:0000184
P39023 (UniProtKB)
TAS
GO:0003723
P39023 (UniProtKB)
TAS
GO:0003735
P39023 (UniProtKB)
NAS
GO:0005515
P39023 (UniProtKB)
IPI
GO:0005515
P39023 (UniProtKB)
IPI
GO:0005634
P39023 (UniProtKB)
IDA
GO:0005654
P39023 (UniProtKB)
IDA
GO:0005730
P39023 (UniProtKB)
IDA
GO:0005730
P39023 (UniProtKB)
IDA
GO:0005730
P39023 (UniProtKB)
IDA
GO:0005737
P39023 (UniProtKB)
IDA
GO:0005737
P39023 (UniProtKB)
IDA
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005829
P39023 (UniProtKB)
TAS
GO:0005925
P39023 (UniProtKB)
IDA
GO:0006364
P39023 (UniProtKB)
TAS
GO:0006412
P39023 (UniProtKB)
NAS
GO:0006413
P39023 (UniProtKB)
TAS
GO:0006614
P39023 (UniProtKB)
TAS
GO:0019083
P39023 (UniProtKB)
TAS
GO:0022625
P39023 (UniProtKB)
IDA
GO:0044822
P39023 (UniProtKB)
IDA
GO:0044822
P39023 (UniProtKB)
IDA
GO:0070062
P39023 (UniProtKB)
IDA
GO:0071353
P39023 (UniProtKB)
IEA

可能调控 RPL3基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Mammary Neoplasms, Experimental 0.12 1 0 CTD_human
Animal Mammary Neoplasms 0.12 1 0 CTD_human
Malignant neoplasm of breast 0.000271442 1 0 BeFree
Breast Carcinoma 0.000271442 1 0 BeFree
Down Syndrome 0.000271442 1 0 BeFree
Q fever endocarditis 0.000271442 1 0 BeFree
NIEMANN-PICK DISEASE, TYPE C2 0.000271442 1 0 BeFree
Myopathies, Nemaline 0.000271442 1 0 BeFree
Mycoses 0.000271442 1 0 BeFree
Tuberculosis 0.000271442 1 0 BeFree

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