PPM1D (protein phosphatase, Mg2+/Mn2+ dependent 1D)

symbol:
PPM1D
locus group:
protein-coding gene
location:
17q23.3
gene_family:
Protein phosphatases, Mg2+/Mn2+ dependent
alias symbol:
Wip1|PP2C-DELTA
alias name:
wild-type p53-induced phosphatase …
entrez id:
8493
ensembl gene id:
ENSG00000170836
ucsc gene id:
uc002iyt.3
refseq accession:
NM_003620
hgnc_id:
HGNC:9277
approved reserved:
1998-10-14
17q23.3
基因染色体位置图

The protein encoded by this gene is a member of the PP2C family of Ser/Thr protein phosphatases. PP2C family members are known to be negative regulators of cell stress response pathways. The expression of this gene is induced in a p53-dependent manner in response to various environmental stresses. While being induced by tumor suppressor protein TP53/p53, this phosphatase negatively regulates the activity of p38 MAP kinase, MAPK/p38, through which it reduces the phosphorylation of p53, and in turn suppresses p53-mediated transcription and apoptosis. This phosphatase thus mediates a feedback regulation of p38-p53 signaling that contributes to growth inhibition and the suppression of stress induced apoptosis. This gene is located in a chromosomal region known to be amplified in breast cancer. The amplification of this gene has been detected in both breast cancer cell line and primary breast tumors, which suggests a role of this gene in cancer development. [provided by RefSeq, Jul 2008]

由该基因编码的蛋白质是PP2C家族丝氨酸/苏氨酸蛋白磷酸酶的成员。 PP2C家族成员已知是细胞应激反应途径的负调节剂。该基因的表达是在p53依赖性方式响应于各种环境胁迫诱导。同时被诱导肿瘤抑制蛋白TP53 / p53基因,这种磷酸酶负调节的p38 MAP激酶,MAPK / p38的,通过它降低p53的磷酸化的活性,进而抑制p53介导的转录和细胞凋亡。因此,这种磷酸酶介导,有助于生长抑制和应激诱导细胞凋亡的抑制P38-p53信号的反馈调节。该基因位于已知在乳腺癌待扩增的染色体区域。该基因的扩增已经在两种乳腺癌细胞系和原发性乳腺肿瘤,这表明该基因在癌症发展中的作用被检测。 [由RefSeq的,2008年7月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
PPM1D基因的碱基突变:           仅显示部分snp
rs1058864       rs1308169       rs1494959       rs1960355       rs1960356       rs1988736       rs2172806       rs2378768       rs2464601       rs2464602       rs5821296       rs7208231       rs7208331       rs7210987       rs7211070       rs7212086       rs7213795      

PPM1D基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
ACACAGGACCATAAGCCAG
59
CCCAGACTTGTTCATTACACTC
59
TGACACAGGACCATAAGCC
59
CAGACTTGTTCATTACACTCCC
59
GACACAGGACCATAAGCCA
59
CCAGACTTGTTCATTACACTCC
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
CREB1
PPM1D
Unknown

PPM1D基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

PPM1D基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0004722
K7EJH1 (UniProtKB)
IEA
GO:0006470
K7EJH1 (UniProtKB)
IEA
GO:0000086
O15297 (UniProtKB)
IEA
GO:0004722
O15297 (UniProtKB)
IDA
GO:0005515
O15297 (UniProtKB)
IPI
GO:0005515
O15297 (UniProtKB)
IPI
GO:0005634
O15297 (UniProtKB)
TAS
GO:0006470
O15297 (UniProtKB)
TAS
GO:0008285
O15297 (UniProtKB)
TAS
GO:0009267
O15297 (UniProtKB)
IEA
GO:0009314
O15297 (UniProtKB)
TAS
GO:0009617
O15297 (UniProtKB)
IEA
GO:0035970
O15297 (UniProtKB)
IDA
GO:0046872
O15297 (UniProtKB)
IEA
GO:0051019
O15297 (UniProtKB)
IPI

可能调控 PPM1D基因的相关microRNA:     

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Mammary Neoplasms 0.131983168 8 0 BeFree_CTD_human_LHGDN
Glioma 0.120814326 3 0 BeFree_CTD_human
Brain Stem Neoplasms 0.12 1 0 CTD_human
Breast Carcinoma 0.004614512 17 0 BeFree
Malignant neoplasm of breast 0.004614512 17 0 BeFree
Medulloblastoma 0.00408156 5 0 BeFree_LHGDN
Stomach Neoplasms 0.00272435 1 0 LHGDN
Carcinogenesis 0.002714419 10 0 BeFree
Ovarian Carcinoma 0.002442977 9 0 BeFree
Malignant neoplasm of ovary 0.002442977 9 0 BeFree

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