PIKFYVE (phosphoinositide kinase, FYVE-type zinc finger containing)

symbol:
PIKFYVE
locus group:
protein-coding gene
location:
2q34
gene_family:
Zinc fingers, FYVE-type
alias symbol:
MGC40423|KIAA0981|PIP5K|p235|ZFYVE29|FAB1
alias name:
zinc finger, FYVE domain containin…
entrez id:
200576
ensembl gene id:
ENSG00000115020
ucsc gene id:
uc002vcz.3
refseq accession:
NM_015040
hgnc_id:
HGNC:23785
approved reserved:
2003-12-12
2q34
基因染色体位置图

PIKFYVE是一种重要的激酶基因,属于磷脂酰肌醇激酶家族,其编码的蛋白质是一种多功能酶,具有磷脂酰肌醇-3-磷酸5-激酶活性,能够催化磷脂酰肌醇-3-磷酸(PI3P)转化为磷脂酰肌醇-3,5-二磷酸(PI(3,5)P2)。PIKFYVE在细胞内多个生理过程中发挥关键作用,包括膜运输、内体成熟、自噬调控以及离子通道的调节。该基因的主要作用位点集中在早期内体和溶酶体膜上,通过调节PI(3,5)P2的水平影响这些细胞器的功能。PIKFYVE的突变可能导致其功能丧失或异常,进而引发一系列病理变化,例如突变与神经退行性疾病、肌萎缩性侧索硬化症(ALS)以及某些免疫缺陷疾病有关。研究表明,PIKFYVE的功能异常可能导致溶酶体功能障碍,进而影响细胞的自噬过程,这与神经退行性疾病的发生密切相关。此外,PIKFYVE还与病毒感染有关,某些病毒会利用PIKFYVE调控的膜运输机制进入宿主细胞。当PIKFYVE过表达时,可能导致PI(3,5)P2水平异常升高,影响内体和溶酶体的正常功能,进而干扰细胞内的物质运输和降解过程,甚至可能促进肿瘤细胞的存活和转移。相反,PIKFYVE表达降低会导致PI(3,5)P2水平下降,影响自噬和内体成熟,可能导致细胞内废物积累和细胞死亡。PIKFYVE属于磷脂酰肌醇激酶家族,该家族的共性是通过磷酸化磷脂酰肌醇来调控细胞内的信号传导和膜动力学过程。家族成员通常参与细胞生长、存活、代谢和膜运输等重要生理功能。PIKFYVE的独特之处在于其特异性催化PI3P生成PI(3,5)P2,这一过程在维持细胞内环境稳定中具有不可替代的作用。

Phosphorylated derivatives of phosphatidylinositol (PtdIns) regulate cytoskeletal functions, membrane trafficking, and receptor signaling by recruiting protein complexes to cell- and endosomal-membranes. Humans have multiple PtdIns proteins that differ by the degree and position of phosphorylation of the inositol ring. This gene encodes an enzyme (PIKfyve; also known as phosphatidylinositol-3-phosphate 5-kinase type III or PIPKIII) that phosphorylates the D-5 position in PtdIns and phosphatidylinositol-3-phosphate (PtdIns3P) to make PtdIns5P and PtdIns(3,5)biphosphate. The D-5 position also can be phosphorylated by type I PtdIns4P-5-kinases (PIP5Ks) that are encoded by distinct genes and preferentially phosphorylate D-4 phosphorylated PtdIns. In contrast, PIKfyve preferentially phosphorylates D-3 phosphorylated PtdIns. In addition to being a lipid kinase, PIKfyve also has protein kinase activity. PIKfyve regulates endomembrane homeostasis and plays a role in the biogenesis of endosome carrier vesicles from early endosomes. Mutations in this gene cause corneal fleck dystrophy (CFD); an autosomal dominant disorder characterized by numerous small white flecks present in all layers of the corneal stroma. Histologically, these flecks appear to be keratocytes distended with lipid and mucopolysaccharide filled intracytoplasmic vacuoles. Alternative splicing results in multiple transcript variants encoding distinct isoforms.[provided by RefSeq, May 2010]

磷脂酰肌醇磷酸化衍生物(磷脂酰肌醇)招募蛋白复合物到细胞和内体膜细胞骨架调节功能,膜运输和受体信号。人类有由肌醇环的磷酸化程度和位置不同的多个磷脂酰肌醇蛋白。该基因编码的酶(PIKfyve;也称为磷脂酰肌醇-3-磷酸5-激酶III型或PIPKIII),该磷酸化在磷脂酰肌醇和磷脂酰肌醇-3-磷酸(PtdIns3P),以使PtdIns5P和磷脂酰肌醇(3为D-5的位置, 5)二磷酸。在D-5的位置也可以按类型被磷酸化我PtdIns4P-5激酶是由不同的基因编码,优先磷酸D-4磷酸磷脂酰肌醇(PIP5Ks)。与此相反,PIKfyve优先磷酸化的D-3磷酸化磷脂酰肌醇。除了是脂质激酶,PIKfyve还具有蛋白激酶活性。 PIKfyve调节内膜稳态和起着内体载体囊泡从早期内涵体的生物合成的作用。这种基因造成角膜营养不良斑点突变(CFD);常染色体显性遗传疾病的特点是存在于角膜基质的所有层无数小白色斑点。组织学上,这些斑点似乎是角膜扩张与脂质和粘多糖充满胞浆内空泡。在多个转录剪接变异体导致不同的编码亚型。[由RefSeq的,2010年5月提供]

PIKFYVE基因的碱基序列:[NCBI]
Loading Gene Browser...
PIKFYVE基因的碱基突变:           仅显示部分snp
rs893253       rs893254       rs893255       rs893256       rs934712       rs934713       rs934714       rs959855       rs976247       rs994696       rs994697       rs999890       rs999891       rs1004189       rs1030879       rs1370370       rs1437414      

PIKFYVE基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TGGGCTATACAGGAGACCT
59
AATTACTGTCTGTGGAATGAGC
59
CGCTCTTCAGCATTAGACAC
59
CTTCGAAGCTGAACAGCTG
59
AAATTCTTCTGGACAGTGTGC
59
GATCCTGAAACTCCATTCCAC
58
TCTGTTAGGTCACCCACAC
59
TCGGAGGTCTCCTAATGCT
60
CAGGAGAACACAGGAGACC
59
ATTACTGTCTGTGGAATGAGCA
60
TGGGCTATACAGGAGACCT
59
AATTACTGTCTGTGGAATGAGC
58
AAATTCTTCTGGACAGTGTGC
59
GATCCTGAAACTCCATTCCAC
59
CTCTTACCTCCTACTGCTCTC
59
GGAGAATAACTGACATACCTGAG
58
CAGTCGGTCTTTGAGTCAC
58
GTCCTGCAACCTGTTATTCC
59
AGTTGGATTCTCCAGTACCTG
59
CTGGTGTTACCTGTTTGCA
58
      尚未收录相关数据

PIKFYVE基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

PIKFYVE基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0046872
C9JL08 (UniProtKB)
IEA
GO:0005524
E9PDH4 (UniProtKB)
IEA
GO:0005622
E9PDH4 (UniProtKB)
IEA
GO:0035556
E9PDH4 (UniProtKB)
IEA
GO:0046872
E9PDH4 (UniProtKB)
IEA
GO:0000139
Q9Y2I7 (UniProtKB)
TAS
GO:0000285
Q9Y2I7 (UniProtKB)
IEA
GO:0005515
Q9Y2I7 (UniProtKB)
IPI
GO:0005515
Q9Y2I7 (UniProtKB)
IPI
GO:0005515
Q9Y2I7 (UniProtKB)
IPI
GO:0005515
Q9Y2I7 (UniProtKB)
IPI
GO:0005515
Q9Y2I7 (UniProtKB)
IPI
GO:0005524
Q9Y2I7 (UniProtKB)
IEA
GO:0005829
Q9Y2I7 (UniProtKB)
IEA
GO:0005911
Q9Y2I7 (UniProtKB)
IEA
GO:0006661
Q9Y2I7 (UniProtKB)
TAS
GO:0006661
Q9Y2I7 (UniProtKB)
TAS
GO:0006661
Q9Y2I7 (UniProtKB)
TAS
GO:0008270
Q9Y2I7 (UniProtKB)
IEA
GO:0010008
Q9Y2I7 (UniProtKB)
IDA
GO:0012506
Q9Y2I7 (UniProtKB)
IEA
GO:0016308
Q9Y2I7 (UniProtKB)
TAS
GO:0031410
Q9Y2I7 (UniProtKB)
IEA
GO:0031901
Q9Y2I7 (UniProtKB)
IDA
GO:0031901
Q9Y2I7 (UniProtKB)
IDA
GO:0031901
Q9Y2I7 (UniProtKB)
TAS
GO:0031902
Q9Y2I7 (UniProtKB)
TAS
GO:0032288
Q9Y2I7 (UniProtKB)
IEA
GO:0034504
Q9Y2I7 (UniProtKB)
IMP
GO:0035556
Q9Y2I7 (UniProtKB)
IEA
GO:0036092
Q9Y2I7 (UniProtKB)
IEA
GO:0042147
Q9Y2I7 (UniProtKB)
IMP
GO:0042147
Q9Y2I7 (UniProtKB)
IMP
GO:0043813
Q9Y2I7 (UniProtKB)
TAS
GO:0045121
Q9Y2I7 (UniProtKB)
IDA
GO:0046854
Q9Y2I7 (UniProtKB)
IEA
GO:0048471
Q9Y2I7 (UniProtKB)
IEA
GO:1904562
Q9Y2I7 (UniProtKB)
IC
GO:2000785
Q9Y2I7 (UniProtKB)
IMP
GO:0006898
Q9Y2I7 (UniProtKB)
IMP

可能调控 PIKFYVE基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Fleck corneal dystrophy 0.480814326 3 3 BeFree_CLINVAR_CTD_human_ORPHANET_UNIPROT
Tobacco Use Disorder 0.002367032 1 0 GAD
Fibrinogen Adverse Event 0.002367032 1 1 GAD
Carcinogenesis 0.000542884 2 0 BeFree
Age related macular degeneration 0.000542884 2 0 BeFree
Carcinoma, Transitional Cell 0.000271442 1 0 BeFree
Kashin-Beck Disease 0.000271442 1 0 BeFree
Disseminated Malignant Neoplasm 0.000271442 1 0 BeFree
Neoplasm Metastasis 0.000271442 1 0 BeFree

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