PHOX2B (paired like homeobox 2B)

symbol:
PHOX2B
locus group:
protein-coding gene
location:
4p13
gene_family:
PRD class homeoboxes and pseudogenes
alias symbol:
NBPhox
alias name:
None
entrez id:
8929
ensembl gene id:
ENSG00000109132
ucsc gene id:
uc003gwf.4
refseq accession:
NM_003924
hgnc_id:
HGNC:9143
approved reserved:
1999-01-11
4p13
基因染色体位置图

PHOX2B(paired-like homeobox 2B)是一个在神经系统发育中起关键作用的转录因子基因,属于PHOX基因家族。该家族成员(如PHOX2A和PHOX2B)均含有同源异型盒结构域,能够结合DNA调控下游靶基因表达,其共性在于参与自主神经系统、肠神经系统及颅神经节的发育分化。PHOX2B主要在胚胎期表达,主导交感神经、副交感神经及部分感觉神经元的命运决定,其表达产物通过激活酪氨酸羟化酶(TH)和多巴胺β-羟化酶(DBH)等基因,促进儿茶酚胺能神经元的分化。该基因的典型作用位点包括脑干(如呼吸中枢相关区域)和肾上腺髓质。突变对PHOX2B功能的影响显著,尤其是多聚丙氨酸重复序列的扩展突变(常见20-25次重复,正常为20次以内)会导致蛋白错误折叠和核内聚集,引发先天性中枢性低通气综合征(CCHS),表现为自主呼吸控制缺陷,常伴随巨结肠或神经母细胞瘤。此外,错义突变可能破坏DNA结合能力,导致霍纳综合征或神经嵴衍生组织异常。PHOX2B过表达会过度驱动神经嵴细胞向神经元分化,可能诱发神经母细胞瘤;而表达降低则导致自主神经节发育不全,引发肠神经系统缺失(如赫什朋病)。该基因与多种神经嵴相关疾病相关,其单倍剂量不足还影响RET信号通路,进而干扰肠神经迁移。家族性CCHS病例中,PHOX2B突变携带者的外显率接近100%,但表现度可能因修饰基因或环境因素而异。

The DNA-associated protein encoded by this gene is a member of the paired family of homeobox proteins localized to the nucleus. The protein functions as a transcription factor involved in the development of several major noradrenergic neuron populations and the determination of neurotransmitter phenotype. The gene product is linked to enhancement of second messenger-mediated activation of the dopamine beta-hydroylase, c-fos promoters and several enhancers, including cyclic amp-response element and serum-response element. [provided by RefSeq, Jul 2008]

由该基因编码的DNA结合蛋白是定位于细胞核同源异型框蛋白的配对家族的一个成员。该蛋白质的功能中涉及几个主要去甲肾上腺素能神经元种群的发展和神经递质的表型的测定的转录因子。该基因产物被链接到增强多巴胺β-内hydroylase的第二信使介导的活化和c-fos的启动子和多个增强子,包括环AMP-应答元件和血清应答元件。 [由RefSeq的,2008年7月提供]

PHOX2B基因的碱基序列:[NCBI]
Loading Gene Browser...
PHOX2B基因的碱基突变:           仅显示部分snp
rs1063611       rs2196822       rs3038692       rs3833622       rs3834807       rs4608840       rs6811325       rs6826373       rs7661854       rs11723860       rs17879258       rs17881486       rs17882335       rs17884724       rs17885216       rs17885864       rs28462174      

PHOX2B基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AGTATAACCCGATAAGGACCA
58
AGTTTGTAAGGAACTGCGG
58
ATTTCCTCGGTTTCTTCCC
57
AGTTTGTAAGGAAACCCGC
58
AGTATAACCCGATAAGGACCAC
59
GTTTGTAAGGAACTGCGGC
60
GCAGATAACAAATTTCCTCGG
58
GTGAAGAGTTTGTAAGGAAACC
58
GTATAACCCGATAAGGACCAC
58
AGTTTGTAAGGAACTGCGG
58
GCAGATAACAAATTTCCTCGGT
59
GTGAAGAGTTTGTAAGGAAACCC
60
转录因子
影响基因
影响类型
参考文献链接(PubMed)
PHOX2B
ALK
Activation
PHOX2B
DBH
Activation
PHOX2B
DBH
Unknown
PHOX2B
MSX1
Repression
PHOX2B
PHOX2A
Unknown
PHOX2B
TLX2
Activation
PHOX2B
TLX2
Unknown

PHOX2B基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

PHOX2B基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0000790
Q99453 (UniProtKB)
IDA
GO:0000977
Q99453 (UniProtKB)
IDA
GO:0000978
Q99453 (UniProtKB)
IDA
GO:0001077
Q99453 (UniProtKB)
IDA
GO:0001764
Q99453 (UniProtKB)
ISS
GO:0002087
Q99453 (UniProtKB)
ISS
GO:0003357
Q99453 (UniProtKB)
ISS
GO:0003357
Q99453 (UniProtKB)
IC
GO:0003358
Q99453 (UniProtKB)
ISS
GO:0003360
Q99453 (UniProtKB)
IEP
GO:0006366
Q99453 (UniProtKB)
IEA
GO:0008285
Q99453 (UniProtKB)
IEA
GO:0010001
Q99453 (UniProtKB)
ISS
GO:0010468
Q99453 (UniProtKB)
ISS
GO:0010971
Q99453 (UniProtKB)
ISS
GO:0021533
Q99453 (UniProtKB)
ISS
GO:0021723
Q99453 (UniProtKB)
ISS
GO:0021934
Q99453 (UniProtKB)
ISS
GO:0035914
Q99453 (UniProtKB)
IEA
GO:0045665
Q99453 (UniProtKB)
IEA
GO:0045666
Q99453 (UniProtKB)
IEA
GO:0045944
Q99453 (UniProtKB)
IDA
GO:0045944
Q99453 (UniProtKB)
IDA
GO:0045944
Q99453 (UniProtKB)
IMP
GO:0048483
Q99453 (UniProtKB)
IMP
GO:0048484
Q99453 (UniProtKB)
IEP
GO:0048485
Q99453 (UniProtKB)
ISS
GO:0048486
Q99453 (UniProtKB)
ISS
GO:0048839
Q99453 (UniProtKB)
ISS
GO:0048894
Q99453 (UniProtKB)
ISS
GO:0060541
Q99453 (UniProtKB)
ISS
GO:0061452
Q99453 (UniProtKB)
ISS
GO:0061549
Q99453 (UniProtKB)
ISS
GO:0071157
Q99453 (UniProtKB)
ISS
GO:0071542
Q99453 (UniProtKB)
ISS
GO:0071542
Q99453 (UniProtKB)
IC
GO:0071773
Q99453 (UniProtKB)
ISS
GO:1901166
Q99453 (UniProtKB)
ISS

可能调控 PHOX2B基因的相关microRNA:     

BioGrid

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Congenital central hypoventilation 0.467263739 84 2 BeFree_CTD_human_GAD_MGD_ORPHANET_UNIPROT
Neuroblastoma 0.260583432 38 0 BeFree_CTD_human_GAD_LHGDN_ORPHANET
Hirschsprung Disease 0.136707301 18 0 BeFree_CTD_human_GAD_LHGDN
Crohn Disease 0.128186863 6 1 BeFree_CTD_human_GAD
CCHS WITH HIRSCHSPRUNG DISEASE 0.121085767 4 1 BeFree_CLINVAR
NEUROBLASTOMA, SUSCEPTIBILITY TO, 2 0.12 0 2 CLINVAR
Hirschsprung disease ganglioneuroblastoma 0.12 0 1 CLINVAR
Neural crest tumor 0.12 0 0 ORPHANET
Hypoventilation 0.029253216 10 0 GAD_LHGDN
Central neuroblastoma 0.009500466 35 0 BeFree

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