PDGFD (platelet derived growth factor D)

symbol:
PDGFD
locus group:
protein-coding gene
location:
11q22.3
gene_family:
alias symbol:
SCDGF-B|MSTP036|IEGF
alias name:
spinal cord derived growth factor B
entrez id:
80310
ensembl gene id:
ENSG00000170962
ucsc gene id:
uc001php.4
refseq accession:
NM_025208
hgnc_id:
HGNC:30620
approved reserved:
2004-01-22
11q22.3
基因染色体位置图

PDGFD(血小板衍生生长因子D)属于血小板衍生生长因子(PDGF)家族,该家族包括PDGFA、PDGFB、PDGFC和PDGFD四个成员,它们通过激活受体酪氨酸激酶(PDGFRα和PDGFRβ)调控细胞增殖、迁移和存活。PDGFD以无活性形式分泌,需经蛋白水解激活才能结合PDGFRβ或PDGFRα/β异源二聚体,主要参与血管生成、组织修复和胚胎发育。其表达在成纤维细胞、平滑肌细胞和某些肿瘤细胞中显著。PDGFD突变可能导致功能丧失或异常激活,与纤维化疾病(如肺纤维化)、动脉粥样硬化和肿瘤(如胶质瘤、前列腺癌)相关。过表达会促进血管异常增生和肿瘤转移,而表达降低可能影响组织修复。PDGF家族共性为通过旁分泌或自分泌信号调控间充质细胞行为,并在病理条件下参与纤维化与癌症进展。研究PDGFD有助于开发针对上述疾病的靶向疗法。

The protein encoded by this gene is a member of the platelet-derived growth factor family. The four members of this family are mitogenic factors for cells of mesenchymal origin and are characterized by a core motif of eight cysteines, seven of which are found in this factor. This gene product only forms homodimers and, therefore, does not dimerize with the other three family members. It differs from alpha and beta members of this family in having an unusual N-terminal domain, the CUB domain. Two splice variants have been identified for this gene. [provided by RefSeq, Jul 2008]

由该基因编码的蛋白质是血小板衍生的生长因子家族的一个成员。这个家族的四名成员是间充质起源的细胞有丝分裂的因素和八个半胱氨酸,其中7个在这个因素中找到一个核心主题的特点。该基因产物仅形成同二聚体,因此,不与其它三个家族成员二聚化。它不同于这个家庭的α和β成员有一个不寻常的N端结构域,虎子域。两个剪接变体已被确定为这个基因。 [由RefSeq的,2008年7月提供]

PDGFD基因的碱基序列:[NCBI]
Loading Gene Browser...
PDGFD基因的碱基突变:           仅显示部分snp
rs260797       rs260798       rs260799       rs260800       rs260801       rs260802       rs260803       rs260804       rs260805       rs260806       rs260807       rs260808       rs1052313       rs1566580       rs2279789       rs3050598       rs4754098      

PDGFD基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
ATCACATTCAAGTCCGATGAC
58
CGGGTTGGAAATCTTCCAG
58
ATCACATTCAAGTCCGATGAC
58
GGGTTGGAAATCTTCCAGC
58
TCACATTCAAGTCCGATGAC
58
CGGGTTGGAAATCTTCCAG
58
      尚未收录相关数据

PDGFD基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

PDGFD基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005161
H0YD37 (UniProtKB)
IEA
GO:0048008
H0YD37 (UniProtKB)
IEA
GO:0000139
Q9GZP0 (UniProtKB)
TAS
GO:0000139
Q9GZP0 (UniProtKB)
TAS
GO:0005161
Q9GZP0 (UniProtKB)
IBA
GO:0005576
Q9GZP0 (UniProtKB)
TAS
GO:0005576
Q9GZP0 (UniProtKB)
TAS
GO:0005615
Q9GZP0 (UniProtKB)
IBA
GO:0005788
Q9GZP0 (UniProtKB)
TAS
GO:0007275
Q9GZP0 (UniProtKB)
IEA
GO:0007596
Q9GZP0 (UniProtKB)
IBA
GO:0008083
Q9GZP0 (UniProtKB)
IEA
GO:0008284
Q9GZP0 (UniProtKB)
IBA
GO:0014068
Q9GZP0 (UniProtKB)
IBA
GO:0030335
Q9GZP0 (UniProtKB)
IBA
GO:0031954
Q9GZP0 (UniProtKB)
IBA
GO:0036120
Q9GZP0 (UniProtKB)
IEA
GO:0043406
Q9GZP0 (UniProtKB)
IBA
GO:0048008
Q9GZP0 (UniProtKB)
IBA
GO:0048146
Q9GZP0 (UniProtKB)
IEA
GO:0048661
Q9GZP0 (UniProtKB)
IEA
GO:0050730
Q9GZP0 (UniProtKB)
IEA
GO:0051781
Q9GZP0 (UniProtKB)
IEA
GO:0070062
Q9GZP0 (UniProtKB)
IDA
GO:0070301
Q9GZP0 (UniProtKB)
IEA
GO:0070374
Q9GZP0 (UniProtKB)
IBA
GO:0071230
Q9GZP0 (UniProtKB)
IEA
GO:0071560
Q9GZP0 (UniProtKB)
IEA
GO:0071673
Q9GZP0 (UniProtKB)
IEA
GO:0072126
Q9GZP0 (UniProtKB)
IEA
GO:2000439
Q9GZP0 (UniProtKB)
IEA

可能调控 PDGFD基因的相关microRNA:     

Reactome

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Coronary Artery Disease 0.12 1 0 CTD_human
Lung Injury 0.12 1 0 CTD_human
Fibrosis 0.12 1 0 CTD_human
Glomerulonephritis 0.080271442 2 0 BeFree_RGD
Liver Cirrhosis 0.08 1 0 RGD
Myocardial Infarction 0.08 1 0 RGD
Prostatic Neoplasms 0.002995792 2 0 BeFree_LHGDN
Cerebrovascular accident 0.002909916 2 0 BeFree_GAD
Pancreatic Neoplasm 0.00272435 1 0 LHGDN
Diabetes Mellitus 0.002638474 1 1 BeFree_GAD

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