OFD1 (OFD1 centriole and centriolar satellite protein)

symbol:
OFD1
locus group:
protein-coding gene
location:
Xp22.2
gene_family:
alias symbol:
71-7A|JBTS10
alias name:
Joubert syndrome type 10
entrez id:
8481
ensembl gene id:
ENSG00000046651
ucsc gene id:
uc004cvp.5
refseq accession:
NM_003611
hgnc_id:
HGNC:2567
approved reserved:
1998-10-01
Xp22.2
基因染色体位置图

OFD1(Oral-Facial-Digital Syndrome 1)基因位于X染色体短臂(Xp22.2),编码一种中心体和基体相关蛋白,主要参与纤毛的形成和功能调控。该基因的突变会导致一种罕见的X连锁显性遗传病——口-面-指综合征1型(OFD1综合征),主要表现为口腔、面部及指/趾的发育异常,并可能伴随多囊肾、神经系统缺陷等。OFD1蛋白在细胞分裂、纤毛组装及信号转导中起关键作用,尤其在胚胎发育期间对组织形态发生至关重要。突变通常导致蛋白功能丧失,影响纤毛的正常形成,进而干扰Hedgehog等发育相关信号通路,引发多器官发育障碍。该基因属于中心体/基体相关基因家族,这类基因的共同特点是参与微管组织、细胞周期调控及纤毛相关功能。OFD1过表达可能破坏中心体复制平衡,导致染色体不稳定或纤毛异常增生;而表达降低则会引起纤毛缺陷,影响细胞运动、信号感知等功能,与肾囊肿、视网膜变性等疾病相关。此外,OFD1与初级纤毛疾病(纤毛病)密切相关,这类疾病常表现为神经、骨骼、视网膜等多系统异常。在女性携带者中,由于X染色体随机失活,症状严重程度存在差异,而男性半合子突变通常致死。研究还发现OFD1与细胞自噬、mTOR通路存在交互作用,可能影响代谢调控。该基因家族成员多具有保守的中心体定位序列,并在纤毛发生、细胞极性建立等过程中协同作用。

This gene is located on the X chromosome and encodes a centrosomal protein. A knockout mouse model has been used to study the effect of mutations in this gene. The mouse gene is also located on the X chromosome, however, unlike the human gene it is not subject to X inactivation. Mutations in this gene are associated with oral-facial-digital syndrome type I and Simpson-Golabi-Behmel syndrome type 2. Many pseudogenes have been identified; a single pseudogene is found on chromosome 5 while as many as fifteen have been found on the Y chromosome. Alternatively spliced transcripts have been described for this gene but the biological validity of these transcripts has not been determined. [provided by RefSeq, Jul 2008]

此基因位于X染色体上并且编码中心体蛋白。敲除小鼠模型已被用于研究突变在该基因的作用。小鼠基因也位于X染色体上,但是,与人类基因是不受X染色体失活。在这个基因的突变与口腔颌面数字综合征I型和Simpson-Golabi-Behmel辨证分型2.许多假已经确定有关;一个假的5号染色体上发现的,而多达15已在Y染色体上找到。可变剪接转录物已经被描述为这种基因,但这些转录物的生物有效性尚未确定。 [由RefSeq的,2008年7月提供]

OFD1基因的碱基序列:[NCBI]
Loading Gene Browser...
OFD1基因的碱基突变:           仅显示部分snp
rs781665189       rs781730305       rs781771508       rs781591913       rs781574077       rs781586689       rs781484868       rs781420575       rs781451985       rs781360188       rs781277679       rs781298608       rs781351566       rs781220762       rs781242321       rs781190242       rs781196178      

OFD1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GTTCAGCACCTTTGTTCCTC
59
TAAACATGTTGGACTGCGC
59
AATCACTGGTTTCAGGATCTG
58
CTACAAAGATGACGGCTCCT
59
GAGTCGGCAGATAAGAGCT
59
GAGTCGTCTAGTTCTTCATGAG
58
AATCACTGGTTTCAGGATCTG
58
CTACAAAGATGACGGCTCC
58
GTTCAGCACCTTTGTTCCT
58
TAAACATGTTGGACTGCGC
59
AGTCGGCAGATAAGAGCTC
59
GAGTCGTCTAGTTCTTCATGAG
58
GAGTCGGCAGATAAGAGCT
59
TTCGACTTTGTCACTAGATTGC
59
TTCAGCACCTTTGTTCCTC
58
GTAAACATGTTGGACTGCG
57
AAATCACTGGTTTCAGGATCTG
58
TACAAAGATGACGGCTCCT
58
      尚未收录相关数据

OFD1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

OFD1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0015630
A6NF31 (UniProtKB)
IDA
GO:0000086
O75665 (UniProtKB)
TAS
GO:0005515
O75665 (UniProtKB)
IPI
GO:0005515
O75665 (UniProtKB)
IPI
GO:0005515
O75665 (UniProtKB)
IPI
GO:0005515
O75665 (UniProtKB)
IPI
GO:0005515
O75665 (UniProtKB)
IPI
GO:0005515
O75665 (UniProtKB)
IPI
GO:0005515
O75665 (UniProtKB)
IPI
GO:0005515
O75665 (UniProtKB)
IPI
GO:0005515
O75665 (UniProtKB)
IPI
GO:0005515
O75665 (UniProtKB)
IPI
GO:0005634
O75665 (UniProtKB)
IEA
GO:0005813
O75665 (UniProtKB)
IDA
GO:0005814
O75665 (UniProtKB)
IDA
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005829
O75665 (UniProtKB)
TAS
GO:0005929
O75665 (UniProtKB)
IDA
GO:0015630
O75665 (UniProtKB)
IDA
GO:0016020
O75665 (UniProtKB)
IDA
GO:0034451
O75665 (UniProtKB)
ISS
GO:0036064
O75665 (UniProtKB)
IDA
GO:0042802
O75665 (UniProtKB)
IPI
GO:0043014
O75665 (UniProtKB)
ISS
GO:0043015
O75665 (UniProtKB)
ISS
GO:0060271
O75665 (UniProtKB)
ISS
GO:0060287
O75665 (UniProtKB)
ISS
GO:0007067
O75665 (UniProtKB)
ISS
GO:0007099
O75665 (UniProtKB)
ISS
GO:0090307
O75665 (UniProtKB)
ISS

可能调控 OFD1基因的相关microRNA:     

Reactome

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
SIMPSON-GOLABI-BEHMEL SYNDROME, TYPE 2 (disorder) 0.360814326 3 1 BeFree_CLINVAR_CTD_human_ORPHANET
Orofaciodigital Syndrome I 0.360542884 7 90 BeFree_CLINVAR_ORPHANET_UNIPROT
Orofaciodigital syndrome type1 0.241628651 6 0 BeFree_CTD_human_ORPHANET
JOUBERT SYNDROME 10 (disorder) 0.240271442 1 3 BeFree_CLINVAR_CTD_human
OROFACIODIGITAL SYNDROME VI 0.12 0 0 ORPHANET
Retinitis Pigmentosa 0.12 0 0 ORPHANET
Oto-Palato-digital syndrome type 1 0.12 1 0 CTD_human
Intellectual Disability 0.00272435 1 0 LHGDN
Orofaciodigital Syndromes 0.001357209 5 0 BeFree
Congenital Abnormality 0.001085767 4 0 BeFree

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