NOD1 (nucleotide binding oligomerization domain containing 1)

symbol:
NOD1
locus group:
protein-coding gene
location:
7p14.3
gene_family:
NLR family
alias symbol:
NLRC1|CLR7.1
alias name:
nucleotide-binding oligomerization…
entrez id:
10392
ensembl gene id:
ENSG00000106100
ucsc gene id:
uc003tav.4
refseq accession:
NM_001354849
hgnc_id:
HGNC:16390
approved reserved:
2001-12-11
7p14.3
基因染色体位置图

NOD1(核苷酸结合寡聚化结构域1,Nucleotide-binding oligomerization domain-containing protein 1)是一种模式识别受体(PRR),属于NOD样受体(NLR)基因家族。该家族成员均含有中央的核苷酸结合寡聚化结构域(NOD domain)和C端的富含亮氨酸重复序列(LRR),负责识别病原体相关分子模式(PAMPs)或危险相关分子模式(DAMPs)。NOD1主要定位于细胞质,通过识别细菌肽聚糖的降解产物(如iE-DAP)激活NF-κB和MAPK信号通路,诱导促炎细胞因子(如IL-6、TNF-α)的产生,在先天免疫防御中起关键作用。其功能位点包括N端的CARD结构域(用于下游信号传导)、中央的NOD结构域(负责自我寡聚化)和C端的LRR(配体识别)。NOD1突变可能导致功能丧失或异常激活,与克罗恩病、哮喘、特应性皮炎等免疫相关疾病密切相关。例如,某些SNP(如rs2075820)会降低其对细菌产物的敏感性,增加感染风险;而过度激活则可能引发慢性炎症。过表达NOD1会增强炎症反应,可能导致自身免疫疾病或组织损伤;而表达降低则使机体易受细菌感染,尤其是革兰氏阴性菌。NOD1还通过调控肠道菌群平衡影响代谢性疾病(如糖尿病),并与肿瘤微环境相关——在某些癌症中高表达促进肿瘤生长,而在另一些情况下可能增强抗肿瘤免疫。NLR家族共性包括:均含NOD和LRR结构域、形成炎症小体(inflammasome)或信号复合物、参与免疫和细胞死亡调控。需要注意的是,NOD1与同家族的NOD2功能部分重叠但识别配体不同(NOD2识别MDP),且两者在疾病关联性上存在差异。

This gene encodes a member of the NOD (nucleotide-binding oligomerization domain) family. This member is a cytosolic protein. It contains an N-terminal caspase recruitment domain (CARD), a centrally located nucleotide-binding domain (NBD), and 10 tandem leucine-rich repeats (LRRs) in its C terminus. The CARD is involved in apoptotic signaling, LRRs participate in protein-protein interactions, and mutations in the NBD may affect the process of oligomerization and subsequent function of the LRR domain. This protein is an intracellular pattern-recognition receptor (PRR) that initiates inflammation in response to a subset of bacteria through the detection of bacterial diaminopimelic acid. Multiple alternatively spliced transcript variants differring in the 5' UTR have been described, but the full-length nature of these variants has not been determined. [provided by RefSeq, Oct 2009]

该基因编码的NOD(核苷酸结合寡聚化结构域)家族的一员。该成员是一种胞浆蛋白。它包含在它的C-末端的N-末端蛋白酶募集结构域(CARD),位于中央的核苷酸结合结构域(NBD)和10串联富含亮氨酸的重复序列(个LRR)。该卡是涉及凋亡信号,个LRR参与蛋白质 - 蛋白质相互作用,并且在NBD突变可能影响低聚和LRR结构域的后续功能的过程。这种蛋白是在通过检测细菌二氨基庚二酸的响应于细菌的一个子集启动炎症的细胞内的模式识别受体(PRR)。多个可变剪接转录物变体的5‘端非编码区differring已经描述,但这些变体的全长性质尚未确定。 [由RefSeq的,2009年10月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
NOD1基因的碱基突变:           仅显示部分snp
rs732038       rs736781       rs736782       rs1558065       rs1558066       rs1558067       rs1558068       rs1558069       rs1558070       rs2190504       rs2391869       rs2906766       rs2906773       rs2970502       rs2975632       rs2975633       rs3735433      

NOD1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CCAAGTCATCCAGAAGCCA
60
TCCTGACTTACAATCACCGT
59
GTGGCCAAGTGATTGTAAGTC
60
AAACAGCAACTTGTCTTCCC
59
GCAAGAGGTGGAGATTGTG
59
TTCTGGAATTGCTTCTGTCTC
58
AAACCAGATCACTGACGGT
59
TTTCCAAAGTCCCAAATAGGTC
59
CACGCATCTTAAACTGGGA
58
GATTTGCTGTTCTTCACAGC
58
TCTTTAGCGCATCAAATACTCG
59
CTGACTTACAATCACCTCTCAC
59
GAGATTTGCCTAAATGGAAACC
58
CCTCTCAGAAACAGATAATCCG
59
TGAGGTTGGGCTTATCCAG
59
TTATGCCAGTGTTGCTCTG
58
AAGAAATGCACATCTCCGC
59
ACTTACAATCACTCAGTGTCAC
59
GAATCAGATCACAGCTAAGGG
58
GGTTTCCATTTAGGCAAATCTC
58
转录因子
影响基因
影响类型
参考文献链接(PubMed)
NR1I2
NOD1
Repression

NOD1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

NOD1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005524
G3XAL1 (UniProtKB)
IEA
GO:0042981
G3XAL1 (UniProtKB)
IEA
GO:0042981
Q7Z2K1 (UniProtKB)
IEA
GO:0000187
Q9Y239 (UniProtKB)
TAS
GO:0002606
Q9Y239 (UniProtKB)
ISS
GO:0005515
Q9Y239 (UniProtKB)
IPI
GO:0005515
Q9Y239 (UniProtKB)
IPI
GO:0005515
Q9Y239 (UniProtKB)
IPI
GO:0005515
Q9Y239 (UniProtKB)
IPI
GO:0005515
Q9Y239 (UniProtKB)
IPI
GO:0005515
Q9Y239 (UniProtKB)
IPI
GO:0005524
Q9Y239 (UniProtKB)
IEA
GO:0005737
Q9Y239 (UniProtKB)
IDA
GO:0005737
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0005829
Q9Y239 (UniProtKB)
TAS
GO:0006915
Q9Y239 (UniProtKB)
TAS
GO:0006919
Q9Y239 (UniProtKB)
IDA
GO:0006952
Q9Y239 (UniProtKB)
TAS
GO:0006954
Q9Y239 (UniProtKB)
TAS
GO:0007165
Q9Y239 (UniProtKB)
TAS
GO:0007254
Q9Y239 (UniProtKB)
TAS
GO:0008656
Q9Y239 (UniProtKB)
TAS
GO:0009595
Q9Y239 (UniProtKB)
TAS
GO:0016045
Q9Y239 (UniProtKB)
IDA
GO:0016323
Q9Y239 (UniProtKB)
IDA
GO:0016324
Q9Y239 (UniProtKB)
IEA
GO:0032731
Q9Y239 (UniProtKB)
IEA
GO:0032755
Q9Y239 (UniProtKB)
IEA
GO:0032760
Q9Y239 (UniProtKB)
IEA
GO:0032760
Q9Y239 (UniProtKB)
IEA
GO:0035556
Q9Y239 (UniProtKB)
IDA
GO:0042228
Q9Y239 (UniProtKB)
IDA
GO:0042742
Q9Y239 (UniProtKB)
IDA
GO:0042802
Q9Y239 (UniProtKB)
IDA
GO:0042802
Q9Y239 (UniProtKB)
IPI
GO:0042803
Q9Y239 (UniProtKB)
IPI
GO:0042834
Q9Y239 (UniProtKB)
TAS
GO:0043123
Q9Y239 (UniProtKB)
IDA
GO:0043280
Q9Y239 (UniProtKB)
IDA
GO:0045087
Q9Y239 (UniProtKB)
IEA
GO:0046330
Q9Y239 (UniProtKB)
IEA
GO:0050700
Q9Y239 (UniProtKB)
IDA
GO:0050830
Q9Y239 (UniProtKB)
IEA
GO:0051000
Q9Y239 (UniProtKB)
IEA
GO:0051092
Q9Y239 (UniProtKB)
IDA
GO:0051092
Q9Y239 (UniProtKB)
IDA
GO:0051092
Q9Y239 (UniProtKB)
TAS
GO:0051259
Q9Y239 (UniProtKB)
TAS
GO:0070374
Q9Y239 (UniProtKB)
IEA
GO:0070423
Q9Y239 (UniProtKB)
TAS
GO:0071225
Q9Y239 (UniProtKB)
IMP
GO:1901224
Q9Y239 (UniProtKB)
IMP
GO:1904417
Q9Y239 (UniProtKB)
IEA

可能调控 NOD1基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
nervous system disorder 0.12 1 0 CTD_human
Crohn Disease 0.017088363 10 3 BeFree_GAD_LHGDN
Inflammatory Bowel Diseases 0.013711509 15 6 BeFree_GAD_LHGDN
Asthma 0.011454097 8 0 BeFree_GAD_LHGDN
Inflammation 0.008173051 3 0 LHGDN
Ulcerative Colitis 0.006091273 6 0 BeFree_GAD
Sarcoidosis 0.005362824 1 0 BeFree_GAD_LHGDN
Dermatitis, Atopic 0.002909916 2 0 BeFree_GAD
Colonic Neoplasms 0.00272435 1 0 LHGDN
Infection 0.00272435 1 0 LHGDN

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