NELFB (negative elongation factor complex member B)

symbol:
NELFB
locus group:
protein-coding gene
location:
9q34.3
gene_family:
alias symbol:
KIAA1182|NELF-B
alias name:
None
entrez id:
25920
ensembl gene id:
ENSG00000188986
ucsc gene id:
uc284qzh.1
refseq accession:
NM_015456
hgnc_id:
HGNC:24324
approved reserved:
2008-02-21
9q34.3

NELFB(Negative Elongation Factor B)是NELF(Negative Elongation Factor)复合体的一个亚基,属于转录调控因子家族。NELF复合体由四个亚基组成(NELFA、NELFB、NELFCD和NELFE),主要功能是抑制RNA聚合酶II的转录延伸,通过与DSIF(DRB Sensitivity-Inducing Factor)协同作用,在启动子近端暂停转录过程,从而精细调控基因表达。NELFB作为复合体的核心成员,直接参与结合RNA和Pol II,维持转录暂停状态,确保基因在适当的环境信号下被激活或抑制。NELFB的突变或表达异常可能导致转录调控紊乱,影响细胞增殖、分化及发育过程。研究表明,NELFB在癌症中可能发挥双重作用:在某些肿瘤(如乳腺癌)中过表达会促进细胞增殖和转移,而在其他情况下(如神经母细胞瘤)其低表达可能与恶性进展相关。NELF家族成员的共性是均参与转录暂停机制,通过动态响应细胞信号(如生长因子、应激刺激)调控下游基因(如原癌基因、细胞周期相关基因)的表达。若NELFB表达异常,可能破坏靶基因(如MYC、FOS)的转录动力学,进而影响细胞命运决定。此外,NELFB还参与病毒感染(如HIV)的潜伏期维持,其抑制可激活病毒转录。该基因的调控网络涉及组蛋白修饰(如H3K4me3)和非编码RNA的相互作用,凸显其在表观遗传调控中的重要性。

中文English

NELFB是负延伸因子(NELF),其中还包括NELFA的一个亚基(WHSC2; MIM 606026),无论是NELFC或NELFD(TH1L; MIM 605297),和NELFE(RDBP; MIM 154040)。 NELF充当与DRB灵敏度诱导因子(DSIF),SPT4的异二聚体(SUPT4H1; MIM 603555)和SPT5(SUPT5H; MIM 602102),以使RNA聚合酶II(见MIM 180660)的转录暂停(成田等人,。 2003 [考研12612062])。[由OMIM,2008年3月供应]

NELFB基因的碱基序列:[NCBI]
Loading Gene Browser...
蛋白质序列
1MFAGLQDLGV ANGEDLKETL TNCTEPLKAI EQFQTENGVL
41LPSLQSALPF LDLHGTPRLE FHQSVFDELR DKLLERVSAI
81 ASEGKAEER YKKLEDLLEK SFSLVKMPSL QPVVMCVMKH
121LPKVPEKKLK LVMADKELYR ACAVEVKRQI WQDNQALFGD
161E VSPLLKQY ILEKESALFS TELSVLHNFF SPSPKTRRQG
201EVVQRLTRMV GKNVKLYDMV LQFLRTLFLR TRNVHYCTLR
241AE LLMSLHD LDVGEICTVD PCHKFTWCLD ACIRERFVDS
281KRARELQGFL DGVKKGQEQV LGDLSMILCD PFAINTLALS
321TVR HLQELV GQETLPRDSP DLLLLLRLLA LGQGAWDMID
361SQVFKEPKME VELITRFLPM LMSFLVDDYT FNVDQKLPAE
401EKAP VSYPN TLPESFTKFL QEQRMACEVG LYYVLHITKQ
441RNKNALLRLL PGLVETFGDL AFGDIFLHLL TGNLALLADE
481FALED FCSS LFDGFFLTAS PRKENVHRHA LRLLIHLHPR
521VAPSKLEALQ KALEPTGQSG EAVKELYSQL GEKLEQLDHR
561KPSPAQ AAE TPALELPLPS VPAPAPL
结构预测来自 AlphaFold DB(UniProt: Q8WX92),颜色表示 pLDDT 置信度(深蓝高、黄橙低)。
NELFB基因的碱基突变:           仅显示部分snp
rs1134511       rs28367295       rs28418318       rs28455716       rs28631372       rs28637219       rs28657536       rs34439533       rs62584891       rs73668206       rs73668231       rs73668232       rs112228488       rs112821505       rs113294775       rs113349042       rs115120583      

NELFB基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GACGAATTTGCCCTTGAGG
59
CACGTTCTCCTTCCTTGGA
59
GATCAGAAACTTCCGGCTG
59
CTGCAGAAACTTAGTGAAGCT
59
GCTTCACTAAGTTTCTGCAGG
60
TCCTCTGCTTGGTGATGTG
60
转录因子
影响基因
影响类型
参考文献链接(PubMed)
NELFB
TFF1
Repression
NELFB
TFF1
Unknown

NELFB基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

NELFB基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005634
A0A0X1KG71 (UniProtKB)
IEA
GO:0045892
A0A0X1KG71 (UniProtKB)
IEA
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005515
Q8WX92 (UniProtKB)
IPI
GO:0005654
Q8WX92 (UniProtKB)
IDA
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005654
Q8WX92 (UniProtKB)
TAS
GO:0005737
Q8WX92 (UniProtKB)
IDA
GO:0006366
Q8WX92 (UniProtKB)
TAS
GO:0006368
Q8WX92 (UniProtKB)
TAS
GO:0006368
Q8WX92 (UniProtKB)
TAS
GO:0006368
Q8WX92 (UniProtKB)
TAS
GO:0032021
Q8WX92 (UniProtKB)
IDA
GO:0034244
Q8WX92 (UniProtKB)
IBA
GO:0050434
Q8WX92 (UniProtKB)
TAS

可能调控 NELFB基因的相关microRNA:     

String
BioGrid
IntAct
mentha
MINT
Reactome
加载中…
关联基因 作用方式 资源库来源/分值
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Mammary Neoplasms 0.0054487 2 0 LHGDN
Stomach Neoplasms 0.00272435 1 0 LHGDN
Malignant neoplasm of breast 0.000814326 3 0 BeFree
Breast Carcinoma 0.000814326 3 0 BeFree
Stomach Carcinoma 0.000271442 1 0 BeFree
Adenocarcinoma 0.000271442 1 0 BeFree
Malignant neoplasm of stomach 0.000271442 1 0 BeFree

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