MMP1 (matrix metallopeptidase 1)

symbol:
MMP1
locus group:
protein-coding gene
location:
11q22.2
gene_family:
Endogenous ligands|Matrix metallopeptidases
alias symbol:
None
alias name:
interstitial collagenase
entrez id:
4312
ensembl gene id:
ENSG00000196611
ucsc gene id:
uc001phi.3
refseq accession:
NM_002421
hgnc_id:
HGNC:7155
approved reserved:
1986-01-01
11q22.2
基因染色体位置图

MMP1(基质金属蛋白酶1)属于基质金属蛋白酶(MMP)家族,这是一类依赖锌离子的内肽酶,主要功能是降解细胞外基质(ECM)成分,如胶原蛋白、弹性蛋白和蛋白聚糖,在组织重塑、伤口修复、胚胎发育和炎症反应中起关键作用。MMP1特异性切割I型、II型和III型胶原,这是ECM的主要结构蛋白,因此它在结缔组织代谢中尤为重要。MMP1的活性受组织抑制剂(TIMPs)严格调控,失衡可能导致病理状态。MMP1基因突变或表达异常与多种疾病相关,例如过表达会促进肿瘤侵袭和转移,因为其过度降解ECM为癌细胞扩散创造条件,同时激活生长因子释放。类风湿性关节炎和骨关节炎中也发现MMP1水平升高,导致关节软骨破坏。相反,MMP1表达不足可能影响伤口愈合或组织修复。MMP家族成员(如MMP2、MMP9)共享类似结构,包括前肽域、催化域和铰链区,但底物偏好不同。某些单核苷酸多态性(如MMP1-1607 1G/2G)可增强其启动子活性,增加癌症风险。研究还显示MMP1通过激活蛋白酶激活受体(PAR1)参与炎症信号传导。靶向MMP1的药物(如抑制剂)正在开发中,用于治疗癌症和炎症性疾病,但因MMP家族功能冗余和广泛生理作用,面临挑战。

Proteins of the matrix metalloproteinase (MMP) family are involved in the breakdown of extracellular matrix in normal physiological processes, such as embryonic development, reproduction, and tissue remodeling, as well as in disease processes, such as arthritis and metastasis. Most MMP's are secreted as inactive proproteins which are activated when cleaved by extracellular proteinases. This gene encodes a secreted enzyme which breaks down the interstitial collagens, types I, II, and III. The gene is part of a cluster of MMP genes which localize to chromosome 11q22.3. Alternative splicing results in multiple transcript variants.[provided by RefSeq, Mar 2009]

基质金属蛋白酶(MMP)家族的蛋白质是参与细胞外基质的在正常生理过程,诸如胚胎发育,生殖和组织重塑,以及在疾病过程,如关节炎和转移的击穿。大多数的MMP的分泌为当由胞外蛋白酶裂解其中被激活无活性原蛋白。该基因编码一种分解插页胶原,I型,II和III分泌的酶。该基因是定位于染色体11q22.3基质金属蛋白酶的基因簇的一部分。选择性剪接结果在多个抄本变形。[由RefSeq的,2009年03月提供]

MMP1基因的碱基序列:[NCBI]
Loading Gene Browser...
MMP1基因的碱基突变:           仅显示部分snp
rs5854       rs10488       rs470132       rs470146       rs470211       rs470215       rs470221       rs470358       rs470558       rs470747       rs473509       rs475007       rs488178       rs491152       rs494379       rs498186       rs513964      

MMP1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CAGTAAGCTAACCTTTGATGCT
59
TTTGTGCGCATGTAGAATCTG
60
CCTCTGACATTCACCAAGGT
60
AGAGTTGTCCCGATGATCTC
59
ACAGTAAGCTAACCTTTGATGC
59
TTGTGCGCATGTAGAATCTG
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
BACH1
MMP1
Activation
CEBPB
MMP1
Unknown
CITED2
MMP1
Repression
ETS1
MMP1
Activation
ETS1
MMP1
Unknown
ETS2
MMP1
Unknown
ETV3
MMP1
Unknown
ETV4
MMP1
Unknown
FLI1
MMP1
Repression
FOS
MMP1
Activation

MMP1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

MMP1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0004175
P03956 (UniProtKB)
IDA
GO:0004222
P03956 (UniProtKB)
IDA
GO:0004222
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0004252
P03956 (UniProtKB)
TAS
GO:0005509
P03956 (UniProtKB)
IEA
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005576
P03956 (UniProtKB)
TAS
GO:0005578
P03956 (UniProtKB)
IEA
GO:0006508
P03956 (UniProtKB)
IDA
GO:0006508
P03956 (UniProtKB)
IDA
GO:0008270
P03956 (UniProtKB)
IEA
GO:0016032
P03956 (UniProtKB)
IEA
GO:0022617
P03956 (UniProtKB)
TAS
GO:0030574
P03956 (UniProtKB)
TAS
GO:0032461
P03956 (UniProtKB)
IDA
GO:0044267
P03956 (UniProtKB)
TAS
GO:0050900
P03956 (UniProtKB)
TAS

可能调控 MMP1基因的相关microRNA:     

Reactome

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Chronic Obstructive Airway Disease 0.225384847 16 0 BeFree_CTD_human_GAD_LHGDN_RGD
Neoplasm Metastasis 0.147173982 74 0 BeFree_CTD_human_LHGDN
Colorectal Neoplasms 0.146528866 11 0 CTD_human_GAD_LHGDN
Mammary Neoplasms 0.140970545 15 0 BeFree_CTD_human_LHGDN
Lung Neoplasms 0.135902907 8 0 BeFree_CTD_human_GAD_LHGDN
Atherosclerosis 0.132354299 12 0 BeFree_CTD_human_GAD_LHGDN
Oral Submucous Fibrosis 0.12764398 5 0 BeFree_CTD_human_GAD
Neoplasm Invasiveness 0.125091382 3 0 CTD_human_GAD_LHGDN
Non-Small Cell Lung Carcinoma 0.123181358 4 0 BeFree_CTD_human_GAD
Hallopeau-Siemens Disease 0.121085767 4 0 BeFree_ORPHANET

联系方式

山东省济南市章丘区文博路2号 齐鲁师范学院 genelibs生信实验室

山东省济南市高新区舜华路750号大学科技园北区F座4单元2楼

电话: 0531-88819269

E-mail: product@genelibs.com

微信公众号

关注微信订阅号,实时查看信息,关注医学生物学动态。