MECP2 (methyl-CpG binding protein 2)

symbol:
MECP2
locus group:
protein-coding gene
location:
Xq28
gene_family:
X-linked mental retardation
alias symbol:
None
alias name:
None
entrez id:
4204
ensembl gene id:
ENSG00000169057
ucsc gene id:
uc004fjv.3
refseq accession:
NM_004992
hgnc_id:
HGNC:6990
approved reserved:
1996-09-03
Xq28
基因染色体位置图

MECP2(甲基化CpG结合蛋白2)是一种位于X染色体上的关键基因,编码甲基化CpG结合蛋白2,属于甲基化DNA结合蛋白(MBD)家族。该家族成员通过识别并结合甲基化的DNA区域,参与表观遗传调控,影响基因表达。MECP2蛋白主要在中枢神经系统中高表达,尤其在神经元中发挥重要作用,通过调节染色质结构和基因转录参与神经发育、突触可塑性及神经元功能维持。MECP2蛋白包含两个主要功能域:甲基化DNA结合域(MBD)和转录抑制域(TRD),前者负责结合甲基化DNA,后者招募组蛋白去乙酰化酶等复合物以抑制靶基因表达。MECP2突变与多种神经系统疾病相关,最典型的是Rett综合征(RTT),这是一种主要影响女性的神经发育障碍,表现为发育倒退、语言丧失、运动功能障碍和自闭症样行为。大多数RTT病例由MECP2功能丧失性突变引起,如R106W、T158M等常见错义突变导致蛋白稳定性或DNA结合能力下降。此外,MECP2重复或过表达可导致MECP2重复综合征,表现为智力障碍、癫痫和运动异常,说明其表达水平需精确调控。MECP2功能异常还与其他疾病如自闭症、智力障碍和某些精神疾病相关。在动物模型中,MECP2敲除小鼠表现出类似RTT的症状,而过表达小鼠则出现神经退行性表型,证实其剂量敏感性。MECP2通过调控下游靶基因(如BDNF、DLX5等)影响神经发育,其表达变化可能破坏神经元网络平衡。该基因还参与胶质细胞功能,影响髓鞘形成。MECP2的转录后修饰(如磷酸化)可动态调节其活性,例如在神经元活动中BDNF调控依赖MECP2磷酸化状态。研究MECP2有助于理解表观遗传机制在神经疾病中的作用,并为相关治疗(如基因疗法或小分子调控)提供靶点。

DNA methylation is the major modification of eukaryotic genomes and plays an essential role in mammalian development. Human proteins MECP2, MBD1, MBD2, MBD3, and MBD4 comprise a family of nuclear proteins related by the presence in each of a methyl-CpG binding domain (MBD). Each of these proteins, with the exception of MBD3, is capable of binding specifically to methylated DNA. MECP2, MBD1 and MBD2 can also repress transcription from methylated gene promoters. In contrast to other MBD family members, MECP2 is X-linked and subject to X inactivation. MECP2 is dispensible in stem cells, but is essential for embryonic development. MECP2 gene mutations are the cause of most cases of Rett syndrome, a progressive neurologic developmental disorder and one of the most common causes of mental retardation in females. [provided by RefSeq, Jul 2009]

DNA甲基化是真核基因组的主要修改,并播放在哺乳动物发育中起重要作用。人类蛋白质MECP2,MBD1,MBD2,MBD3和MBD4包括家族由每一个中甲基化CpG结合结构域(MBD)的存在有关的核蛋白质。每个这些蛋白,用MBD3的例外,是能够特异性结合到甲基化的DNA。 MECP2,MBD1和MBD2也可以抑制甲基化从基因启动子的转录。相对于其他的MBD家庭成员,MECP2是X连锁并受X染色体失活。 MECP2是在干细胞中可涂布,但是对于胚胎发育是必不可少的。 MECP2基因突变是Rett综合征,进行性神经发育障碍和精神发育迟滞的女性中最常见的原因之一的大多数情况的原因。 [由RefSeq的,2009年7月提供]

MECP2基因的碱基序列:[NCBI]
Loading Gene Browser...
MECP2基因的碱基突变:           仅显示部分snp
rs782820321       rs782820183       rs782819018       rs782814793       rs782813866       rs782811632       rs782810113       rs782809973       rs782809624       rs782808165       rs782807480       rs782806083       rs782805738       rs782805651       rs782805356       rs782804619       rs782803951      

MECP2基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
ATAGTTCCCATCAGGAGCC
59
TCTTCCCTTAGAGCCTCTG
58
ACAGGATTCCATGGTAGCT
58
GAGGTCCTGGTCTTCTGAC
59
AATACACCTTGCTTCTGTAGAC
58
GAGGTGTCAGAAACCACTG
58
TAGAGAAGGAGCTGCTTCG
59
TTCCCTATTCTAGTGTGGGAG
58
CTCTGCAGTAGTCTCACGT
59
TTTCTTCCCTCGCTCAGTC
59
TAGCAGGAACAAGTAGGTGG
59
CCCAGAACACAATGTCTAGTC
59
CTGCTGGGAAGTATGATGTG
59
CACTTTAGAGCGAAAGGCT
58
TGACCTGATGGTTCTGGAG
59
TTTCTTCCCAAAGGCTGCT
60
GAACTCCTGACCTCAAGCA
59
TCTTCCCTGTAATCCCAGC
59
ATCAGAAGAAGCACGTGGA
59
TTCCTCAACACATGCTGGA
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
MECP2
ABCB1
Unknown
MECP2
ALOX5
Unknown
MECP2
CCND1
Repression
MECP2
CDKL5
Unknown
MECP2
DLX5
Unknown
MECP2
ESR1
Repression
MECP2
ESR1
Unknown
MECP2
GAD1
Repression
MECP2
IGFBP3
Repression
MECP2
MGMT
Unknown

MECP2基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

MECP2基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0003677
A0A087WVW7 (UniProtKB)
IEA
GO:0005634
A0A087WVW7 (UniProtKB)
IEA
GO:0000122
A0A087WXF0 (UniProtKB)
IEA
GO:0005634
A0A087WXF0 (UniProtKB)
IEA
GO:0010385
A0A087WXF0 (UniProtKB)
IEA
GO:0042826
A0A087WXF0 (UniProtKB)
IEA
GO:0003677
A0A087X1U4 (UniProtKB)
IEA
GO:0005634
A0A087X1U4 (UniProtKB)
IEA
GO:0003677
A0A0D9SFX7 (UniProtKB)
IEA
GO:0005634
A0A0D9SFX7 (UniProtKB)
IEA
GO:0003677
B5MCB4 (UniProtKB)
IEA
GO:0005634
B5MCB4 (UniProtKB)
IEA
GO:0000122
P51608 (UniProtKB)
IEA
GO:0000400
P51608 (UniProtKB)
IEA
GO:0000790
P51608 (UniProtKB)
IEA
GO:0000792
P51608 (UniProtKB)
IDA
GO:0001662
P51608 (UniProtKB)
IEA
GO:0001666
P51608 (UniProtKB)
IEA
GO:0001964
P51608 (UniProtKB)
IEA
GO:0001976
P51608 (UniProtKB)
IEA
GO:0002087
P51608 (UniProtKB)
IEA
GO:0003677
P51608 (UniProtKB)
TAS
GO:0003700
P51608 (UniProtKB)
IEA
GO:0003714
P51608 (UniProtKB)
TAS
GO:0003729
P51608 (UniProtKB)
IEA
GO:0005515
P51608 (UniProtKB)
IPI
GO:0005515
P51608 (UniProtKB)
IPI
GO:0005515
P51608 (UniProtKB)
IPI
GO:0005515
P51608 (UniProtKB)
IPI
GO:0005615
P51608 (UniProtKB)
IDA
GO:0005634
P51608 (UniProtKB)
IDA
GO:0005634
P51608 (UniProtKB)
IDA
GO:0005634
P51608 (UniProtKB)
IDA
GO:0005634
P51608 (UniProtKB)
IDA
GO:0005739
P51608 (UniProtKB)
IEA
GO:0005829
P51608 (UniProtKB)
IBA
GO:0006020
P51608 (UniProtKB)
IEA
GO:0006122
P51608 (UniProtKB)
IEA
GO:0006342
P51608 (UniProtKB)
IEA
GO:0006349
P51608 (UniProtKB)
IEA
GO:0006351
P51608 (UniProtKB)
IEA
GO:0006541
P51608 (UniProtKB)
IEA
GO:0007416
P51608 (UniProtKB)
IEA
GO:0007507
P51608 (UniProtKB)
IEA
GO:0007585
P51608 (UniProtKB)
IEA
GO:0007616
P51608 (UniProtKB)
IEA
GO:0007626
P51608 (UniProtKB)
IBA
GO:0008104
P51608 (UniProtKB)
IEA
GO:0008134
P51608 (UniProtKB)
IEA
GO:0008211
P51608 (UniProtKB)
IEA
GO:0008284
P51608 (UniProtKB)
IEA
GO:0008327
P51608 (UniProtKB)
IBA
GO:0008344
P51608 (UniProtKB)
IEA
GO:0008542
P51608 (UniProtKB)
IEA
GO:0009314
P51608 (UniProtKB)
IBA
GO:0009405
P51608 (UniProtKB)
IEA
GO:0009791
P51608 (UniProtKB)
IEA
GO:0010212
P51608 (UniProtKB)
IEA
GO:0010288
P51608 (UniProtKB)
IEA
GO:0010385
P51608 (UniProtKB)
IMP
GO:0016358
P51608 (UniProtKB)
IEA
GO:0016571
P51608 (UniProtKB)
IEA
GO:0016573
P51608 (UniProtKB)
IEA
GO:0019230
P51608 (UniProtKB)
IEA
GO:0019233
P51608 (UniProtKB)
IEA
GO:0019904
P51608 (UniProtKB)
IPI
GO:0021549
P51608 (UniProtKB)
IEA
GO:0021591
P51608 (UniProtKB)
IEA
GO:0031061
P51608 (UniProtKB)
IEA
GO:0031490
P51608 (UniProtKB)
IEA
GO:0032048
P51608 (UniProtKB)
IEA
GO:0032355
P51608 (UniProtKB)
IEA
GO:0035067
P51608 (UniProtKB)
IEA
GO:0035176
P51608 (UniProtKB)
IEA
GO:0035197
P51608 (UniProtKB)
IEA
GO:0042551
P51608 (UniProtKB)
IEA
GO:0042826
P51608 (UniProtKB)
IEA
GO:0043234
P51608 (UniProtKB)
IEA
GO:0043524
P51608 (UniProtKB)
IEA
GO:0044030
P51608 (UniProtKB)
IEA
GO:0044822
P51608 (UniProtKB)
IDA
GO:0045322
P51608 (UniProtKB)
IEA
GO:0045892
P51608 (UniProtKB)
IDA
GO:0045893
P51608 (UniProtKB)
IEA
GO:0046470
P51608 (UniProtKB)
IEA
GO:0047485
P51608 (UniProtKB)
IPI
GO:0048712
P51608 (UniProtKB)
IEA
GO:0050432
P51608 (UniProtKB)
IEA
GO:0051965
P51608 (UniProtKB)
IEA
GO:0060079
P51608 (UniProtKB)
IEA
GO:0060291
P51608 (UniProtKB)
IEA
GO:0098794
P51608 (UniProtKB)
IEA

可能调控 MECP2基因的相关microRNA:     

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Rett Syndrome 0.8 532 259 BeFree_CLINVAR_CTD_human_GAD_LHGDN_MGD_ORPHANET_UNIPROT
Mental Retardation, X-Linked, Syndromic 13 0.48 4 27 CLINVAR_CTD_human_ORPHANET_UNIPROT
Lubs X-linked mental retardation syndrome 0.362171535 8 0 BeFree_CLINVAR_CTD_human_ORPHANET
ENCEPHALOPATHY, NEONATAL SEVERE, DUE TO MECP2 MUTATIONS 0.36 0 9 CLINVAR_CTD_human_ORPHANET
Angelman Syndrome 0.246795978 15 7 BeFree_CLINVAR_CTD_human_LHGDN
AUTISM, X-LINKED, SUSCEPTIBILITY TO, 3 (finding) 0.24 0 6 CLINVAR_CTD_human
Seizures 0.2112586 18 1 BeFree_CTD_human_GAD_LHGDN_RGD
Attention deficit hyperactivity disorder 0.200814326 4 1 BeFree_CLINVAR_RGD
Autistic Disorder 0.156566165 64 2 BeFree_CTD_human_GAD_LHGDN
Intellectual Disability 0.137150496 20 0 BeFree_CTD_human_LHGDN

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