LDOC1 (LDOC1 regulator of NFKB signaling)

symbol:
LDOC1
locus group:
protein-coding gene
location:
Xq27.1
gene_family:
alias symbol:
Mar7|Mart7|SIRH7|RTL7
alias name:
Sushi-Ichi retrotransposon homolog…
entrez id:
23641
ensembl gene id:
ENSG00000182195
ucsc gene id:
uc004fbj.5
refseq accession:
NM_012317
hgnc_id:
HGNC:6548
approved reserved:
2000-05-19
Xq27.1
基因染色体位置图

The protein encoded by this gene contains a leucine zipper-like motif and a proline-rich region that shares marked similarity with an SH3-binding domain. The protein localizes to the nucleus and is down-regulated in some cancer cell lines. It is thought to regulate the transcriptional response mediated by the nuclear factor kappa B (NF-kappaB). The gene has been proposed as a tumor suppressor gene whose protein product may have an important role in the development and/or progression of some cancers. [provided by RefSeq, Jul 2008]

由该基因编码的蛋白质中含有一个亮氨酸拉链样基序和股标有SH3结合域相似性的富含脯氨酸的区域。该蛋白定位于细胞核,在某些肿瘤细胞系被下调。它被认为是调节由核因子κB(NF-κB的)介导的转录反应。的基因已经被提出作为一种肿瘤抑制基因,其蛋白产物可能在一些癌症的发展和/或进展中起重要作用。 [由RefSeq的规定,2008年7月]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
LDOC1基因的碱基突变:           仅显示部分snp
rs782819133       rs782778699       rs782768794       rs782755864       rs782745113       rs782741825       rs782712898       rs782706476       rs782709689       rs782690755       rs782649481       rs782653115       rs782678233       rs782629477       rs782639870       rs782616829       rs782604812      

LDOC1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CCTAATCAGCCTCCTCACC
59
ATCCATCTCGATGTAGGGC
59
CAGACTACCACCTTTCGAG
57
AAAGGCATAGCCAACTCTG
58
CCAGAGAACTATGCTGCCA
60
AGGTGGTAGTCTGTAGGTG
58
TACATCGAGATGGATAGCCC
59
GTTTCATCTCATCGAGGAAGG
59
TGAACGAGAACCGATTCTG
58
GTGAGGAGGCTGATTAGGA
58
AACTATGCTGCCACTTCAC
58
CTCGAAAGGTGGTAGTCTG
57
      尚未收录相关数据

LDOC1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

LDOC1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005515
O95751 (UniProtKB)
IPI
GO:0005634
O95751 (UniProtKB)
IDA
GO:0005730
O95751 (UniProtKB)
IDA
GO:0008285
O95751 (UniProtKB)
IEA

可能调控 LDOC1基因的相关microRNA:     

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Pancreatic Neoplasm 0.00272435 1 0 LHGDN
Squamous cell carcinoma 0.000542884 2 0 BeFree
Carcinogenesis 0.000271442 1 0 BeFree
Malignant neoplasm of pancreas 0.000271442 1 0 BeFree
Chronic Lymphocytic Leukemia 0.000271442 1 0 BeFree
Hypertensive disease 0.000271442 1 0 BeFree
Pancreatic carcinoma 0.000271442 1 0 BeFree

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