L1CAM (L1 cell adhesion molecule)

symbol:
L1CAM
locus group:
protein-coding gene
location:
Xq28
gene_family:
CD molecules|Fibronectin type III domain containing|I-set domain containing
alias symbol:
CD171|NCAM-L1|CAML1
alias name:
neural cell adhesion molecule L1
entrez id:
3897
ensembl gene id:
ENSG00000198910
ucsc gene id:
uc031tks.2
refseq accession:
NM_024003
hgnc_id:
HGNC:6470
approved reserved:
1989-06-30
Xq28
基因染色体位置图

L1CAM(L1细胞粘附分子)是一种重要的跨膜糖蛋白,属于免疫球蛋白超家族中的L1家族。该基因位于X染色体(Xq28),编码的蛋白质在神经系统的发育和功能中起关键作用,主要参与神经元迁移、轴突导向、髓鞘形成以及突触可塑性等过程。L1CAM通过同源或异源相互作用与其他细胞表面分子(如整合素、神经生长因子受体)结合,介导细胞间粘附和信号传导。其突变会导致多种神经系统疾病,统称为L1综合征,包括X连锁脑积水(HSAS)、痉挛性截瘫1型(SPG1)和MASA综合征(智力障碍、拇指内收、步态异常等)。这些突变通常影响蛋白质的折叠、运输或功能,导致神经元迁移障碍或轴突导向缺陷。L1CAM过表达与多种癌症(如黑色素瘤、结直肠癌)的侵袭和转移相关,因其能增强细胞迁移和粘附;而表达降低则可能影响神经再生和修复能力。L1家族成员(如CHL1、NrCAM)均含有免疫球蛋白样和纤维连接蛋白III样结构域,共同参与细胞识别和神经系统发育。该基因还通过调控ERK和PI3K/AKT信号通路影响细胞存活,并与阿尔茨海默病中β-淀粉样蛋白的毒性作用相关。

The protein encoded by this gene is an axonal glycoprotein belonging to the immunoglobulin supergene family. The ectodomain, consisting of several immunoglobulin-like domains and fibronectin-like repeats (type III), is linked via a single transmembrane sequence to a conserved cytoplasmic domain. This cell adhesion molecule plays an important role in nervous system development, including neuronal migration and differentiation. Mutations in the gene cause X-linked neurological syndromes known as CRASH (corpus callosum hypoplasia, retardation, aphasia, spastic paraplegia and hydrocephalus). Alternative splicing of this gene results in multiple transcript variants, some of which include an alternate exon that is considered to be specific to neurons. [provided by RefSeq, May 2013]

由该基因编码的蛋白质是属于免疫球蛋白超基因家族的轴突糖蛋白。的胞外域,由几个免疫球蛋白样结构域和纤连蛋白样重复(III型)的,通过单跨膜序列的保守的胞质域相关。这种细胞粘附分子起着神经系统的发育,包括神经细胞迁移和分化中起重要作用。突变称为CRASH(胼胝体发育不全,迟钝,失语,痉挛性截瘫和脑积水)基因导致X连锁的神经系统综合征。在多个转录变异体本基因的结果的选择性剪接,其中一些包括被认为是特定的神经元的替代外显子。 [由RefSeq的,2013年5月提供]

L1CAM基因的碱基序列:[NCBI]
Loading Gene Browser...
L1CAM基因的碱基突变:           仅显示部分snp
rs782819687       rs782819951       rs782819666       rs782819212       rs782818719       rs782817251       rs782817909       rs782817224       rs782814807       rs782816280       rs782814242       rs782810182       rs782811117       rs782810065       rs782809879       rs782809530       rs782808723      

L1CAM基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CGCAGGACACTTGAAATATACAG
60
GGTGATCAGATCACTAGCGA
59
CGAGGAATTGATGGAGCCA
60
GAAGTGGACACCATCCCTC
60
AAATCCTCAACTCAAGTGCC
59
AGTACGTCACATTGTATCCG
58
AGTGAAGGATAAGGAGGACAC
59
TCTCCAGGGACCTGTACTC
60
CGAGGAATATGAAGGACACCA
60
CAGAGACAGAACAAAGCCAG
59
ACCTGAAGGTTAAAGATGCA
57
TTCTTCTCGATTGTGCTGC
59
AAGGATAAGGAGGACACCC
58
CCTCGTTGTCACTGTACTC
58
CGAGGAATATGAAGGACACCA
60
TGAGGCTGATGTCATCTGTG
60
CAGTGACAAGTACTTCATAGAGGA
60
ACATCCAGTTCGGTACTGG
59
CGAGGAATATGAAGGACACC
58
AGAGACAGAACAAAGCCAG
57
转录因子
影响基因
影响类型
参考文献链接(PubMed)
PAX2
L1CAM
Unknown
TFAP2A
L1CAM
Unknown

L1CAM基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

L1CAM基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005886
P32004 (UniProtKB)
TAS
GO:0005925
P32004 (UniProtKB)
IDA
GO:0006935
P32004 (UniProtKB)
TAS
GO:0007155
P32004 (UniProtKB)
IEA
GO:0007399
P32004 (UniProtKB)
TAS
GO:0007411
P32004 (UniProtKB)
TAS
GO:0009986
P32004 (UniProtKB)
IDA
GO:0016021
P32004 (UniProtKB)
IEA
GO:0044295
P32004 (UniProtKB)
ISS
GO:0045773
P32004 (UniProtKB)
ISS
GO:0050900
P32004 (UniProtKB)
TAS

可能调控 L1CAM基因的相关microRNA:     

Reactome

BioGrid

IntAct

mentha

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
MASA SYNDROME (disorder) 0.565428837 32 5 BeFree_CLINVAR_CTD_human_MGD_ORPHANET_UNIPROT
X-linked hydrocephalus syndrome 0.492757768 54 9 BeFree_CLINVAR_CTD_human_ORPHANET_UNIPROT
CORPUS CALLOSUM, PARTIAL AGENESIS OF, X-LINKED 0.48 1 1 CLINVAR_CTD_human_ORPHANET_UNIPROT
Hirschsprung Disease 0.12953026 7 0 BeFree_CTD_human_LHGDN
Spastic Paraplegia 0.123257302 12 0 BeFree_CLINVAR
Renal Cell Carcinoma 0.120542884 2 0 BeFree_CTD_human
Aphasia 0.120271442 2 0 BeFree_CTD_human
Congenital Hand Deformities 0.12 1 0 CTD_human
Gait Disorders, Neurologic 0.12 1 0 CTD_human
Hydrocephalus, X-Linked, with Congenital Idiopathic Intestinal Pseudoobstruction 0.12 0 0 CLINVAR

联系方式

山东省济南市章丘区文博路2号 齐鲁师范学院 genelibs生信实验室

山东省济南市高新区舜华路750号大学科技园北区F座4单元2楼

电话: 0531-88819269

E-mail: product@genelibs.com

微信公众号

关注微信订阅号,实时查看信息,关注医学生物学动态。