HLA-DQA2 (major histocompatibility complex, class II, DQ alpha 2)

symbol:
HLA-DQA2
locus group:
protein-coding gene
location:
6p21.32
gene_family:
Histocompatibility complex|C1-set domain containing
alias symbol:
None
alias name:
None
entrez id:
3118
ensembl gene id:
ENSG00000237541
ucsc gene id:
uc011hzy.3
refseq accession:
NM_020056
hgnc_id:
HGNC:4943
approved reserved:
2001-06-22
6p21.32
基因染色体位置图

HLA-DQA2是人类白细胞抗原(HLA)基因家族中的一员,属于HLA II类基因。HLA基因家族编码主要组织相容性复合体(MHC)蛋白,在免疫系统中起关键作用,负责抗原呈递以激活T细胞。HLA-DQA2编码的蛋白质与HLA-DQB1或HLA-DQB2基因编码的蛋白质形成异源二聚体,共同构成HLA-DQ分子,参与外源性抗原的呈递过程。HLA-DQA2主要在抗原呈递细胞(如树突状细胞、B细胞和巨噬细胞)中表达。HLA-DQA2基因突变可能影响其与HLA-DQB基因产物的结合能力,导致抗原呈递功能受损,从而影响免疫应答。某些HLA-DQA2等位基因与自身免疫性疾病如乳糜泻、1型糖尿病和类风湿性关节炎的易感性相关。HLA-DQA2过表达可能导致过度免疫激活,增加自身免疫疾病风险;而表达降低则可能削弱对外来病原体的免疫应答,增加感染风险。HLA基因家族具有高度多态性,成员间共享相似的基因结构和功能,均参与抗原呈递和免疫调节。HLA-DQA2与家族其他成员如HLA-DQA1有较高序列相似性,但表达模式和功能存在差异。

This gene belongs to the HLA class II alpha chain family. The encoded protein forms a heterodimer with a class II beta chain. It is located in intracellular vesicles and plays a central role in the peptide loading of MHC class II molecules by helping to release the CLIP molecule from the peptide binding site. Class II molecules are expressed in antigen presenting cells (B lymphocytes, dendritic cells, macrophages) and are used to present antigenic peptides on the cell surface to be recognized by CD4 T-cells. [provided by RefSeq, Jun 2010]

None

HLA-DQA2基因的碱基序列:[NCBI]
Loading Gene Browser...
HLA-DQA2基因的碱基突变:           仅显示部分snp
rs1744       rs1129956       rs2051597       rs2051598       rs2051599       rs2051600       rs2071798       rs2071799       rs2071800       rs2213565       rs2213567       rs2213568       rs2227127       rs2227128       rs2239799       rs2239800       rs2395249      

HLA-DQA2基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AAGACATTGTGGCTGACCA
60
ATTCATGGGTGTACTGGCC
60
CACCAATGAGGTTCCTGAG
58
TCCACAAGACAGATGAGGG
59
CACCAATGAGGTTCCTGAG
58
CACAAGACAGATGAGGGTG
58
转录因子
影响基因
影响类型
参考文献链接(PubMed)
RFX5
HLA-DQA2
Unknown
RFXANK
HLA-DQA2
Unknown
RFXAP
HLA-DQA2
Unknown

HLA-DQA2基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

HLA-DQA2基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0006955
A0A140TA34 (UniProtKB)
IEA
GO:0019882
A0A140TA34 (UniProtKB)
IEA
GO:0042613
A0A140TA34 (UniProtKB)
IEA
GO:0000139
P01906 (UniProtKB)
TAS
GO:0000139
P01906 (UniProtKB)
TAS
GO:0005765
P01906 (UniProtKB)
TAS
GO:0005765
P01906 (UniProtKB)
TAS
GO:0005765
P01906 (UniProtKB)
TAS
GO:0005765
P01906 (UniProtKB)
TAS
GO:0005765
P01906 (UniProtKB)
TAS
GO:0005765
P01906 (UniProtKB)
TAS
GO:0005765
P01906 (UniProtKB)
TAS
GO:0005765
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005886
P01906 (UniProtKB)
TAS
GO:0005887
P01906 (UniProtKB)
NAS
GO:0006955
P01906 (UniProtKB)
NAS
GO:0010008
P01906 (UniProtKB)
IEA
GO:0012507
P01906 (UniProtKB)
TAS
GO:0012507
P01906 (UniProtKB)
TAS
GO:0019886
P01906 (UniProtKB)
TAS
GO:0030658
P01906 (UniProtKB)
TAS
GO:0030658
P01906 (UniProtKB)
TAS
GO:0030666
P01906 (UniProtKB)
TAS
GO:0030666
P01906 (UniProtKB)
TAS
GO:0030669
P01906 (UniProtKB)
TAS
GO:0030669
P01906 (UniProtKB)
TAS
GO:0031295
P01906 (UniProtKB)
TAS
GO:0032395
P01906 (UniProtKB)
NAS
GO:0032588
P01906 (UniProtKB)
TAS
GO:0032588
P01906 (UniProtKB)
TAS
GO:0032588
P01906 (UniProtKB)
TAS
GO:0032588
P01906 (UniProtKB)
TAS
GO:0032588
P01906 (UniProtKB)
TAS
GO:0042613
P01906 (UniProtKB)
IEA
GO:0050852
P01906 (UniProtKB)
TAS
GO:0060333
P01906 (UniProtKB)
TAS
GO:0071556
P01906 (UniProtKB)
TAS
GO:0071556
P01906 (UniProtKB)
TAS
GO:0071556
P01906 (UniProtKB)
TAS
GO:0071556
P01906 (UniProtKB)
TAS

可能调控 HLA-DQA2基因的相关microRNA:     

Reactome

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Rheumatoid Arthritis 0.123452799 6 8 BeFree_CTD_human_GAD
Hepatitis B, Chronic 0.120542884 3 1 BeFree_GWASCAT
Diabetes Mellitus, Insulin-Dependent 0.018653544 61 2 BeFree_GAD
Celiac Disease 0.006786047 25 0 BeFree
Lupus Erythematosus, Systemic 0.003995683 7 3 BeFree_GAD
Graves Disease 0.003528744 13 0 BeFree
Asthma 0.003181358 4 0 BeFree_GAD
Narcolepsy 0.002909916 3 0 BeFree_GAD
Spontaneous abortion 0.002367032 1 0 GAD
Idiopathic Membranous Glomerulonephritis 0.002171535 8 2 BeFree

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