HCN4 (hyperpolarization activated cyclic nucleotide gated potassium channel 4)

symbol:
HCN4
locus group:
protein-coding gene
location:
15q24.1
gene_family:
Cyclic nucleotide gated channels
alias symbol:
None
alias name:
None
entrez id:
10021
ensembl gene id:
ENSG00000138622
ucsc gene id:
uc002avp.3
refseq accession:
NM_005477
hgnc_id:
HGNC:16882
approved reserved:
2002-09-02
15q24.1
基因染色体位置图

HCN4(超极化激活环核苷酸门控通道4)属于HCN基因家族,该家族包含HCN1、HCN2、HCN3和HCN4四个成员,共同编码超极化激活的环核苷酸门控阳离子通道(hyperpolarization-activated cyclic nucleotide-gated channels)。这些通道的特点是当细胞膜电位超极化(即细胞内更负)时被激活,允许钠和钾离子通过,产生起搏电流(If或Ih电流),在心脏和神经系统中调节节律性电活动。HCN4主要在心脏窦房结(心脏的天然起搏器)中高表达,对维持正常心率至关重要。其表达产物是一种跨膜蛋白,由四个亚基组成功能性通道,受环磷酸腺苷(cAMP)调控,cAMP结合会增强通道开放概率。HCN4突变可导致遗传性心律失常,如窦房结功能障碍(表现为心动过缓)、Brugada综合征或家族性房颤。功能丧失性突变会减弱起搏电流,导致心率减慢;而功能获得性突变可能引发异常自律性增高。HCN4过表达可能增加起搏电流,引起心动过速或心律失常;表达降低则可能导致窦房结功能减退甚至衰竭。该基因还与癫痫等神经系统疾病相关,因HCN通道也分布于大脑(如丘脑),参与神经元节律调控。HCN家族共性包括:具有环核苷酸结合域(CNBD)、电压敏感性、产生缓慢激活的内向电流。在药物开发中,HCN4是心率调节药物的潜在靶点,如伊伐布雷定(ivabradine)通过选择性抑制HCN4通道来降低心率。

This gene encodes a member of the hyperpolarization-activated cyclic nucleotide-gated potassium channels. The encoded protein shows slow kinetics of activation and inactivation, and is necessary for the cardiac pacemaking process. This channel may also mediate responses to sour stimuli. Mutations in this gene have been linked to sick sinus syndrome 2, also known as atrial fibrillation with bradyarrhythmia or familial sinus bradycardia. Two pseudogenes have been identified on chromosome 15. [provided by RefSeq, Oct 2008]

该基因编码的超极化激活环核苷酸门控钾通道的成员。所编码的蛋白质显示激活和失活的慢动力学,并且是必要的心脏起搏过程。该通道也可调解响应酸味刺激。在这个基因的突变已与病态窦房结综合征2,也被称为缓慢性心律失常或家族窦性心动过缓房颤。两个假已经确定在[由RefSeq的,2008年10月提供] 15号染色体

HCN4基因的碱基序列:[NCBI]
Loading Gene Browser...
HCN4基因的碱基突变:           仅显示部分snp
rs471192       rs476846       rs477377       rs478438       rs481579       rs485294       rs488156       rs488556       rs488557       rs488784       rs489913       rs491742       rs492362       rs492448       rs494493       rs497859       rs498005      

HCN4基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AAGATCCTCAGCCTCTTACG
59
TCATGTGGAAGATCTCTTCCC
59
AAGATCCTCAGCCTCTTACG
59
CATGTGGAAGATCTCTTCCCA
60
TACCAGGGCAAGATGTTCG
60
GTTAAAGTTGATGATCTCCTCCC
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
SP1
HCN4
Activation

HCN4基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

HCN4基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0002027
Q9Y3Q4 (UniProtKB)
IMP
GO:0003254
Q9Y3Q4 (UniProtKB)
IDA
GO:0005222
Q9Y3Q4 (UniProtKB)
IDA
GO:0005222
Q9Y3Q4 (UniProtKB)
IDA
GO:0005248
Q9Y3Q4 (UniProtKB)
IMP
GO:0005249
Q9Y3Q4 (UniProtKB)
IDA
GO:0005249
Q9Y3Q4 (UniProtKB)
IMP
GO:0005886
Q9Y3Q4 (UniProtKB)
IDA
GO:0005886
Q9Y3Q4 (UniProtKB)
IDA
GO:0005886
Q9Y3Q4 (UniProtKB)
TAS
GO:0005886
Q9Y3Q4 (UniProtKB)
TAS
GO:0005887
Q9Y3Q4 (UniProtKB)
IBA
GO:0006812
Q9Y3Q4 (UniProtKB)
IDA
GO:0006936
Q9Y3Q4 (UniProtKB)
TAS
GO:0008015
Q9Y3Q4 (UniProtKB)
NAS
GO:0030552
Q9Y3Q4 (UniProtKB)
IEA
GO:0031226
Q9Y3Q4 (UniProtKB)
IDA
GO:0034765
Q9Y3Q4 (UniProtKB)
IEA
GO:0035725
Q9Y3Q4 (UniProtKB)
IMP
GO:0042391
Q9Y3Q4 (UniProtKB)
IMP
GO:0042802
Q9Y3Q4 (UniProtKB)
IPI
GO:0048471
Q9Y3Q4 (UniProtKB)
IDA
GO:0055117
Q9Y3Q4 (UniProtKB)
IMP
GO:0060078
Q9Y3Q4 (UniProtKB)
IEA
GO:0071320
Q9Y3Q4 (UniProtKB)
IDA
GO:0071320
Q9Y3Q4 (UniProtKB)
IDA
GO:0071320
Q9Y3Q4 (UniProtKB)
IDA
GO:0071321
Q9Y3Q4 (UniProtKB)
IDA
GO:0071805
Q9Y3Q4 (UniProtKB)
IDA
GO:0071805
Q9Y3Q4 (UniProtKB)
IMP
GO:0086015
Q9Y3Q4 (UniProtKB)
IMP
GO:0086091
Q9Y3Q4 (UniProtKB)
IMP

可能调控 HCN4基因的相关microRNA:     

Reactome

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Sick Sinus Syndrome 2, Autosomal Dominant 0.36 3 4 CLINVAR_CTD_human_UNIPROT
Brugada Syndrome 8 0.24 0 0 CLINVAR_CTD_human
Atrial Fibrillation 0.24 1 1 CTD_human_GWASCAT
Sinus Node Dysfunction (disorder) 0.121900093 7 1 BeFree_CLINVAR
Sick Sinus Syndrome 0.120271442 1 0 BeFree_ORPHANET
Brugada Syndrome (disorder) 0.12 0 0 ORPHANET
Tachycardia, Ventricular 0.12 0 1 CLINVAR
Left Ventricular Hypertrophy 0.08 1 0 RGD
Bradycardia 0.0054487 2 0 LHGDN
Fibrillation 0.000542884 2 0 BeFree

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