HAMP (hepcidin antimicrobial peptide)

symbol:
HAMP
locus group:
protein-coding gene
location:
19q13.12
gene_family:
alias symbol:
LEAP-1|HEPC|HFE2B|LEAP1
alias name:
None
entrez id:
57817
ensembl gene id:
ENSG00000105697
ucsc gene id:
uc002nyw.4
refseq accession:
NM_021175
hgnc_id:
HGNC:15598
approved reserved:
2001-05-29
19q13.12
基因染色体位置图

HAMP基因(也称为hepcidin antimicrobial peptide,中文译为铁调素抗菌肽)编码一种名为hepcidin(铁调素)的小分子肽,主要在肝脏中表达,是调节体内铁代谢的核心分子。其生物学功能是通过结合并降解细胞膜上的铁转运蛋白ferroportin(铁转运蛋白),抑制肠道对铁的吸收以及巨噬细胞和肝细胞中铁的释放,从而维持体内铁稳态。HAMP基因的表达受多种因素调控,包括体内铁水平、炎症信号(如IL-6)和缺氧状态。当机体铁过量时,HAMP表达上调以减少铁吸收;而缺铁或缺氧时其表达降低以促进铁利用。HAMP基因突变可导致功能异常,分为两类:功能丧失性突变会引起遗传性血色素沉着症(hereditary hemochromatosis),表现为铁过载并损伤器官(如肝硬化和糖尿病);而功能获得性突变可能导致铁限制性贫血(如IRIDA,铁难治性缺铁性贫血)。HAMP过表达会抑制铁吸收和释放,引发贫血;而表达不足则导致铁过载。HAMP属于DEFB(防御素β)基因家族,该家族成员多为具有抗菌活性的小分子肽,但HAMP是其中唯一已知以铁代谢调控为主要功能的成员。此外,HAMP还参与先天免疫,其抗菌特性可能与铁剥夺(病原体生长需铁)和直接杀菌作用相关。在疾病方面,慢性炎症(如类风湿关节炎)中HAMP的异常高表达是炎症性贫血的重要原因,而某些肝癌中HAMP表观遗传沉默可促进肿瘤生长(因癌细胞需铁增殖)。目前针对HAMP的调控策略正在研发中,例如用于血色素沉着症的hepcidin类似物,或用于贫血的hepcidin抑制剂。

The product encoded by this gene is involved in the maintenance of iron homeostasis, and it is necessary for the regulation of iron storage in macrophages, and for intestinal iron absorption. The preproprotein is post-translationally cleaved into mature peptides of 20, 22 and 25 amino acids, and these active peptides are rich in cysteines, which form intramolecular bonds that stabilize their beta-sheet structures. These peptides exhibit antimicrobial activity against bacteria and fungi. Mutations in this gene cause hemochromatosis type 2B, also known as juvenile hemochromatosis, a disease caused by severe iron overload that results in cardiomyopathy, cirrhosis, and endocrine failure. [provided by RefSeq, Oct 2014]

由该基因编码的产物是参与维持铁稳态的,并且有必要对铁存储在巨噬细胞的调节,以及用于肠道铁的吸收。的前原被翻译后切割成的20,22和25个氨基酸的成熟肽,和这些活性肽是富含半胱氨酸,其中形成稳定的β-折叠片结构分子内键。这些肽表现出对细菌和真菌的抗微生物活性。在该基因引起血色病2B型,突变也被称为青少年血色素沉着症,引起严重的铁过载导致在心肌病,肝硬化和内分泌衰竭的疾病。 [由RefSeq的,2014年10月提供]

HAMP基因的碱基序列:[NCBI]
Loading Gene Browser...
HAMP基因的碱基突变:           仅显示部分snp
rs1882694       rs1882695       rs2293689       rs3817623       rs7251432       rs7256866       rs8101606       rs10409503       rs10414846       rs10416533       rs10416795       rs10421768       rs11322802       rs11670019       rs12608868       rs55863037       rs66868858      

HAMP基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TGCAAGACGTAGAACCTACC
60
AGCAGGAATAAATAAGGAAGGG
58
CACTGAGCTCCCAGATCTG
60
ACTTTGATCGATGACAGCAG
58
CACTGAGCTCCCAGATCTG
60
CTTTGATCGATGACAGCAGC
60
GCAAGACGTAGAACCTACC
58
CAGCAGGAATAAATAAGGAAGGG
59
CACTGAGCTCCCAGATCTG
60
TTTGATCGATGACAGCAGC
59
ATGGCTCACACCTGTAATCC
60
GGGCTCAACTGATCTTCCT
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
CEBPA
HAMP
Activation
GATA4
HAMP
Activation
STAT3
HAMP
Activation
STAT3
HAMP
Unknown

HAMP基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

HAMP基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0000122
P81172 (UniProtKB)
ISS
GO:0002092
P81172 (UniProtKB)
IDA
GO:0005102
P81172 (UniProtKB)
IPI
GO:0005102
P81172 (UniProtKB)
IPI
GO:0005179
P81172 (UniProtKB)
IEA
GO:0005179
P81172 (UniProtKB)
IDA
GO:0005179
P81172 (UniProtKB)
IDA
GO:0005576
P81172 (UniProtKB)
NAS
GO:0005615
P81172 (UniProtKB)
IDA
GO:0005623
P81172 (UniProtKB)
IEA
GO:0006879
P81172 (UniProtKB)
IDA
GO:0006879
P81172 (UniProtKB)
IDA
GO:0006955
P81172 (UniProtKB)
TAS
GO:0010039
P81172 (UniProtKB)
IMP
GO:0031640
P81172 (UniProtKB)
IEA
GO:0032413
P81172 (UniProtKB)
IDA
GO:0042742
P81172 (UniProtKB)
IBA
GO:0045179
P81172 (UniProtKB)
IEA
GO:0050832
P81172 (UniProtKB)
IEA
GO:0060586
P81172 (UniProtKB)
IMP
GO:0097690
P81172 (UniProtKB)
IDA
GO:1902916
P81172 (UniProtKB)
IDA
GO:1904039
P81172 (UniProtKB)
IDA
GO:1904255
P81172 (UniProtKB)
IDA
GO:1904479
P81172 (UniProtKB)
IMP
GO:2000646
P81172 (UniProtKB)
IDA

可能调控 HAMP基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
HEMOCHROMATOSIS, TYPE 2B 0.36 3 2 CLINVAR_CTD_human_UNIPROT
Juvenile hemochromatosis 0.247328931 27 0 BeFree_CTD_human_ORPHANET
Iron Overload 0.169962624 104 7 BeFree_CTD_human_GAD_LHGDN
Hemochromatosis 0.167463566 73 1 BeFree_CTD_human_GAD_LHGDN
Anemia 0.150179705 65 0 BeFree_CTD_human_LHGDN
Hereditary hemochromatosis 0.13302921 48 4 BeFree_CLINVAR
beta Thalassemia 0.125895776 14 0 BeFree_CTD_human_GAD
Kidney Failure, Chronic 0.123538676 4 0 BeFree_CTD_human_LHGDN
Biliary Atresia 0.120542884 2 0 BeFree_CTD_human
Hepatolenticular Degeneration 0.12 1 0 CTD_human

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