GLI3 (GLI family zinc finger 3)

symbol:
GLI3
locus group:
protein-coding gene
location:
7p14.1
gene_family:
Zinc fingers, C2H2-type
alias symbol:
PAP-A|PAPA|PAPA1|PAPB|ACLS|PPDIV
alias name:
zinc finger protein GLI3|oncogene …
entrez id:
2737
ensembl gene id:
ENSG00000106571
ucsc gene id:
uc011kbh.3
refseq accession:
NM_000168
hgnc_id:
HGNC:4319
approved reserved:
1989-05-29
7p14.1
基因染色体位置图

GLI3基因属于GLI基因家族,该家族包括GLI1、GLI2和GLI3三个成员,它们都是Hedgehog信号通路的关键转录因子,通过调控下游靶基因的表达参与胚胎发育和组织稳态。GLI3在Hedgehog信号通路中具有双重功能,既能作为转录激活因子(全长形式)促进靶基因表达,也能被加工为截短形式的转录抑制因子(GLI3R),从而精细调控发育过程。GLI3在肢体发育、中枢神经系统形成、骨骼发育和生殖系统发育中发挥关键作用,尤其在指(趾)的模式形成中至关重要。GLI3突变会导致多种遗传疾病,最常见的是Greig头-多指-并指综合征(GCPS)、Pallister-Hall综合征(PHS)和Acrocallosal综合征(ACLS),这些疾病表现为颅面畸形、多指/并指、脑部异常等症状。GLI3功能丧失突变通常导致GCPS,而特定截短突变则引起PHS。GLI3过表达可能导致异常激活Hedgehog信号通路,与某些癌症如基底细胞癌和髓母细胞瘤的发生相关;而表达降低则会影响肢体和神经系统的正常发育,导致发育缺陷。GLI3通过与其他GLI家族成员(特别是GLI2)相互作用来调控Hedgehog信号输出,GLI2和GLI3功能部分冗余但又有各自独特的作用。GLI基因家族的共性是都含有锌指DNA结合结构域,能够识别相似的DNA序列,且都受到Hedgehog信号通路的调控,但它们在激活和抑制功能上的平衡以及组织特异性表达模式上存在差异。GLI3在进化上高度保守,其精确的剂量和时空表达对正常发育至关重要。

This gene encodes a protein which belongs to the C2H2-type zinc finger proteins subclass of the Gli family. They are characterized as DNA-binding transcription factors and are mediators of Sonic hedgehog (Shh) signaling. The protein encoded by this gene localizes in the cytoplasm and activates patched Drosophila homolog (PTCH) gene expression. It is also thought to play a role during embryogenesis. Mutations in this gene have been associated with several diseases, including Greig cephalopolysyndactyly syndrome, Pallister-Hall syndrome, preaxial polydactyly type IV, and postaxial polydactyly types A1 and B. [provided by RefSeq, Jul 2008]

这个基因编码属于的Gli家族的C2H2型锌指蛋白亚类的蛋白质。他们的特点是DNA结合转录因子的刺猬索尼克(嘘)信号的介质。由该基因编码的蛋白定位在细胞质和激活修补的果蝇同源物(PTCH)基因的表达。它也被认为胚胎发育过程中发挥作用。在这种基因突变已与若干疾病,包括基利cephalopolysyndactyly综合征,帕利斯特霍尔综合征,preaxial趾型IV和postaxial趾类型相关联的A 1和B通过的RefSeq,2008年7月提供]

GLI3基因的碱基序列:[NCBI]
Loading Gene Browser...
GLI3基因的碱基突变:           仅显示部分snp
rs699485       rs699486       rs699487       rs699488       rs699489       rs699490       rs699491       rs699492       rs699493       rs699494       rs699495       rs699496       rs699497       rs699498       rs699499       rs699500       rs699501      

GLI3基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
ACGCATTCCAATGAGAAACC
59
CTTCACATGTTTCCGGAGG
59
AATGTTCCTAGAGGGTCTGC
59
CTTTCATCCTAACACAGTCCC
59
CCACTTCTAATGAGGATGAAAGTC
59
CATTCTGTGGCTGCATAGTG
59
ATTCCATAGTGAAGTGCTCCA
59
AATGGTTGCCATTAGAAGTGG
59
ATTCCATAGTGAAGTGCTCCA
59
CTTTCATCCTCATTAGAAGTGGTG
60
AAGAAAGCAAATGGAGCAGG
59
AGAGATTACTACATTCCATGTCCC
60
CCTGTACCAATTGATGCCAG
59
GCGGAAGTCATATGCAATGG
60
AAAGAAAGCAAATGGAGCAGG
60
GAGATTACTACATTCCATGTCCC
59
ATGTTCCTAGAGGGTCTGC
59
ACTTTCATCCTAACACAGTCC
58
CGCATTCCAATGAGAAACC
57
TCTTCACATGTTTCCGGAG
58
转录因子
影响基因
影响类型
参考文献链接(PubMed)
GLI3
HLA-G
Repression
GLI3
SMO
Activation
GLI3
VMP1
Activation

GLI3基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

GLI3基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0003700
C9J9N4 (UniProtKB)
IEA
GO:0006355
C9J9N4 (UniProtKB)
IEA
GO:0007224
C9J9N4 (UniProtKB)
IEA
GO:0009952
C9J9N4 (UniProtKB)
IEA
GO:0009953
C9J9N4 (UniProtKB)
IEA
GO:0048568
C9J9N4 (UniProtKB)
IEA
GO:0000122
P10071 (UniProtKB)
IDA
GO:0000122
P10071 (UniProtKB)
IDA
GO:0000122
P10071 (UniProtKB)
IDA
GO:0000977
P10071 (UniProtKB)
IDA
GO:0000978
P10071 (UniProtKB)
IDA
GO:0001077
P10071 (UniProtKB)
IC
GO:0001656
P10071 (UniProtKB)
IEA
GO:0001658
P10071 (UniProtKB)
IEA
GO:0001701
P10071 (UniProtKB)
IEA
GO:0002052
P10071 (UniProtKB)
IEA
GO:0003682
P10071 (UniProtKB)
IEA
GO:0003700
P10071 (UniProtKB)
IDA
GO:0003700
P10071 (UniProtKB)
IDA
GO:0003700
P10071 (UniProtKB)
IDA
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005515
P10071 (UniProtKB)
IPI
GO:0005634
P10071 (UniProtKB)
IDA
GO:0005634
P10071 (UniProtKB)
IDA
GO:0005634
P10071 (UniProtKB)
IDA
GO:0005634
P10071 (UniProtKB)
IDA
GO:0005634
P10071 (UniProtKB)
IDA
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005654
P10071 (UniProtKB)
TAS
GO:0005737
P10071 (UniProtKB)
IDA
GO:0005737
P10071 (UniProtKB)
IDA
GO:0005737
P10071 (UniProtKB)
IDA
GO:0005829
P10071 (UniProtKB)
IDA
GO:0005829
P10071 (UniProtKB)
TAS
GO:0005829
P10071 (UniProtKB)
TAS
GO:0005829
P10071 (UniProtKB)
TAS
GO:0005829
P10071 (UniProtKB)
TAS
GO:0005829
P10071 (UniProtKB)
TAS
GO:0005929
P10071 (UniProtKB)
IDA
GO:0005929
P10071 (UniProtKB)
IDA
GO:0005930
P10071 (UniProtKB)
IEA
GO:0006366
P10071 (UniProtKB)
IEA
GO:0007224
P10071 (UniProtKB)
TAS
GO:0007411
P10071 (UniProtKB)
IEA
GO:0007442
P10071 (UniProtKB)
IEA
GO:0007507
P10071 (UniProtKB)
IEA
GO:0008013
P10071 (UniProtKB)
IPI
GO:0008285
P10071 (UniProtKB)
IEA
GO:0009952
P10071 (UniProtKB)
IEA
GO:0009954
P10071 (UniProtKB)
IEA
GO:0016485
P10071 (UniProtKB)
IEA
GO:0016607
P10071 (UniProtKB)
IEA
GO:0017053
P10071 (UniProtKB)
IEA
GO:0021631
P10071 (UniProtKB)
IEA
GO:0021766
P10071 (UniProtKB)
IEA
GO:0021775
P10071 (UniProtKB)
IEA
GO:0021776
P10071 (UniProtKB)
IEA
GO:0021798
P10071 (UniProtKB)
IEA
GO:0021819
P10071 (UniProtKB)
IEA
GO:0021861
P10071 (UniProtKB)
IEA
GO:0022018
P10071 (UniProtKB)
IEA
GO:0030318
P10071 (UniProtKB)
IEA
GO:0030324
P10071 (UniProtKB)
IEA
GO:0032332
P10071 (UniProtKB)
IEA
GO:0033077
P10071 (UniProtKB)
ISS
GO:0035035
P10071 (UniProtKB)
IPI
GO:0035108
P10071 (UniProtKB)
IMP
GO:0035108
P10071 (UniProtKB)
IMP
GO:0042060
P10071 (UniProtKB)
IEA
GO:0042307
P10071 (UniProtKB)
IEA
GO:0042475
P10071 (UniProtKB)
IEA
GO:0042733
P10071 (UniProtKB)
TAS
GO:0042826
P10071 (UniProtKB)
IDA
GO:0043066
P10071 (UniProtKB)
IEA
GO:0043585
P10071 (UniProtKB)
TAS
GO:0043586
P10071 (UniProtKB)
IEA
GO:0043627
P10071 (UniProtKB)
IEA
GO:0045060
P10071 (UniProtKB)
ISS
GO:0045665
P10071 (UniProtKB)
IEA
GO:0045669
P10071 (UniProtKB)
IEA
GO:0045879
P10071 (UniProtKB)
ISS
GO:0045892
P10071 (UniProtKB)
IDA
GO:0045892
P10071 (UniProtKB)
IDA
GO:0045892
P10071 (UniProtKB)
IDA
GO:0045893
P10071 (UniProtKB)
ISS
GO:0045944
P10071 (UniProtKB)
IDA
GO:0045944
P10071 (UniProtKB)
IMP
GO:0046638
P10071 (UniProtKB)
ISS
GO:0046639
P10071 (UniProtKB)
ISS
GO:0046872
P10071 (UniProtKB)
IEA
GO:0048557
P10071 (UniProtKB)
IEA
GO:0048566
P10071 (UniProtKB)
TAS
GO:0048589
P10071 (UniProtKB)
IEA
GO:0048593
P10071 (UniProtKB)
IEA
GO:0048704
P10071 (UniProtKB)
IEA
GO:0048709
P10071 (UniProtKB)
IEA
GO:0060021
P10071 (UniProtKB)
IEA
GO:0060364
P10071 (UniProtKB)
IEA
GO:0060366
P10071 (UniProtKB)
IEA
GO:0060367
P10071 (UniProtKB)
IEA
GO:0060594
P10071 (UniProtKB)
IEA
GO:0060831
P10071 (UniProtKB)
IEA
GO:0060840
P10071 (UniProtKB)
IEA
GO:0060873
P10071 (UniProtKB)
IEA
GO:0060875
P10071 (UniProtKB)
IEA
GO:0061005
P10071 (UniProtKB)
IEA
GO:0070242
P10071 (UniProtKB)
ISS
GO:0072372
P10071 (UniProtKB)
IEA
GO:0090090
P10071 (UniProtKB)
IDA
GO:0097542
P10071 (UniProtKB)
TAS
GO:0097542
P10071 (UniProtKB)
TAS
GO:0097542
P10071 (UniProtKB)
TAS
GO:0097542
P10071 (UniProtKB)
TAS
GO:0097542
P10071 (UniProtKB)
TAS
GO:0097542
P10071 (UniProtKB)
TAS
GO:0097546
P10071 (UniProtKB)
TAS
GO:0097546
P10071 (UniProtKB)
TAS
GO:0097546
P10071 (UniProtKB)
TAS
GO:0097546
P10071 (UniProtKB)
TAS
GO:0097546
P10071 (UniProtKB)
TAS
GO:0097546
P10071 (UniProtKB)
TAS
GO:1903010
P10071 (UniProtKB)
IEA
GO:0016592
P10071 (UniProtKB)
IDA

可能调控 GLI3基因的相关microRNA:     

MINT

BioGrid

IntAct

mentha

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Greig cephalopolysyndactyly syndrome 0.567057489 26 8 BeFree_CLINVAR_CTD_human_MGD_ORPHANET_UNIPROT
Pallister-Hall syndrome 0.449977336 21 29 BeFree_CLINVAR_CTD_human_GAD_LHGDN_MGD_ORPHANET
POLYDACTYLY, POSTAXIAL 0.241900093 7 0 BeFree_CLINVAR_CTD_human
Acrocallosal Syndrome 0.240814326 3 0 BeFree_CTD_human_ORPHANET
Polydactyly, preaxial 4 0.24 0 1 CLINVAR_CTD_human
Polydactyly 0.125352893 12 0 BeFree_CTD_human_GAD
Hypothalamic hamartomas 0.120542884 2 0 BeFree_CTD_human
Hypopigmentation disorder 0.120271442 1 0 BeFree_CTD_human
Postaxial polydactyly type A 0.12 1 1 UNIPROT
Stomach Neoplasms 0.12 1 0 CTD_human

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